Contig 010624:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS145B11Sequence627010624 (2)ref|XP_004232283.1|1e-11PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]
JMSF012P08Sequence396010624 (2)ref|XP_004232283.1|2e-26PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]753011279 (2)ref|XP_009761506.1|3e-44PREDICTED: WAT1-related protein At5g40240-like isoform X2 [Nicotiana sylvestris

Alignment

This contig is upended


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JMFS145B11+                               TTTCCAGACAAAAGCATTCTGTGATTAACATATACAGTAG
                      ____________________________________________________________
consensus                                 TTTCCAGACAAAAGCATTCTGTGATTAACATATACAGTAG
 
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JMFS145B11+           ATCAGAAGACTTGTCTTACCTGAAAACCATTGTAAGAACAAATGTAAAAGCAGGCATCAA
                      ____________________________________________________________
consensus             ATCAGAAGACTTGTCTTACCTGAAAACCATTGTAAGAACAAATGTAAAAGCAGGCATCAA
 
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JMFS145B11+           GTTACTAATGCCTGCAGAGAGAGTAGGGGAGCTATAGTTGAGCCCTTGGTTACCCAAAAC
                      ____________________________________________________________
consensus             GTTACTAATGCCTGCAGAGAGAGTAGGGGAGCTATAGTTGAGCCCTTGGTTACCCAAAAC
 
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JMFS145B11+           CACCACACATGTCCTGCAATATCATAATTATAAATTTTTCTTAGATAGATCTTCAATTCA
                      ____________________________________________________________
consensus             CACCACACATGTCCTGCAATATCATAATTATAAATTTTTCTTAGATAGATCTTCAATTCA
 
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JMFS145B11+           TACCTTCAATTTCTTGTTAGCTGCGCTTTATGAATGTAGGATTAATACCCGAGCAAGCCA
                      ____________________________________________________________
consensus             TACCTTCAATTTCTTGTTAGCTGCGCTTTATGAATGTAGGATTAATACCCGAGCAAGCCA
 
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JMFS145B11+           AGGATTAAGCATCTGCTCAGCATATACGAGGATAGAGGTAAAGGATGACTTCTGAAACAT
                      ____________________________________________________________
consensus             AGGATTAAGCATCTGCTCAGCATATACGAGGATAGAGGTAAAGGATGACTTCTGAAACAT
 
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JMFS145B11+           GAAAGTAAACTTATGAGTTGGAATGAAGCTTAATTTGATAAGTAAACAATGGGATTGGTT
                      ____________________________________________________________
consensus             GAAAGTAAACTTATGAGTTGGAATGAAGCTTAATTTGATAAGTAAACAATGGGATTGGTT
 
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JMFS145B11+           TGTTAAACCGGCCTGTGGCGCTGGATGATGAATCCGGGGAGAAGAAAGAGGACGCCAAGG
JMSF012P08+                       CTGTGGCGCTGGATGATGAATACGGGAAGAAGAAAGAGGGTGCCAAGG
                      ____________________________________________________________
consensus             TGTTAAACCGGCCTGTGGCGCTGGATGATGAATCCGGGGAGAAGAAAGAGGGTGCCAAGG
 
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JMFS145B11+           AAATTGTAGTAAACGATGTATATAAGAGGGCTCAACCCGGAGTTGAGGGCCGCTTTGGCT
JMSF012P08+           AAATAGTAGTAAACGATGTATATAAGAGGGCTCAACCCGGAGTTGAGGGCCAATTTGGCT
                      ____________________________________________________________
consensus             AAATTGTAGTAAACGATGTATATAAGAGGGCTCAACCCGGAGTTGAGGGCCGCTTTGGCT
 
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JMFS145B11+           ATTGTGGATGTTGCCATCTCCATACACACCACTACTATCATTGCTGCAAATGGAAGTACT
JMSF012P08+           ATTGTGGTTCTTGCCATCTCCAGACACACCACTACTATCATTCCTACAAATGGAACTACT
                      ____________________________________________________________
consensus             ATTGTGGTTGTTGCCATCTCCATACACACCACTACTATCATTGCTGCAAATGGAAGTACT
 
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JMFS145B11+           TCCTTTCTCAAAATCTCACTTCTCATT                                 
JMSF012P08+           TCCTTTCTCATAATCTCACTTCCCATTATTGCCATATCTTTGCTATCTCACACACTCTCC
                      ____________________________________________________________
consensus             TCCTTTCTCATAATCTCACTTCTCATTATTGCCATATCTTTGCTATCTCACACACTCTCC