Contig 010623:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS029E05Sequence612010623 (3)gb|KDO43061.1|1e-124hypothetical protein CISIN_1g0004611mg, partial [Citrus sinensis]
JMSF012I20Sequence385010623 (3)698010623 (3)ref|XP_006854824.1|8e-27hypothetical protein AMTR_s00063p00191490 [Amborella trichopoda] gb|ERN16291.1|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS029E05+ ACAACTGCTTGAGCA
                      ____________________________________________________________
consensus ACAACTGCTTGAGCA
 
. : . : . : . : . : . :
JMFS029E05+ AGAGAATTTCTAACAGCAAAACGTTCCCCTGCTTTCCCTCGTACAAATATCTGGCCACCG
                      ____________________________________________________________
consensus AGAGAATTTCTAACAGCAAAACGTTCCCCTGCTTTCCCTCGTACAAATATCTGGCCACCG
 
. : . : . : . : . : . :
JMFS029E05+ GTTGCTCCATATAAGCATGTATTACCCACTATAGTGGCATCCTCTGGACAAAACCCAGTC
                      ____________________________________________________________
consensus GTTGCTCCATATAAGCATGTATTACCCACTATAGTGGCATCCTCTGGACAAAACCCAGTC
 
. : . : . : . : . : . :
JMFS029E05+ TTTTCAACAGGAGTGACGACTATTTCTCCACCAGCCATACCCTTCCCCACATAGTCATTA
rJMSF012I20- CCTTCCCCACATAGTCATTA
                      ____________________________________________________________
consensus TTTTCAACAGGAGTGACGACTATTTCTCCACCAGCCATACCCTTCCCCACATAGTCATTA
 
. : . : . : . : . : . :
JMFS029E05+ GCTTCTCCTACAAGACGGATGTTCATTCCAGGTGTCAAAAAACAACCAAATGACTGCCCA
rJMSF012I20- GCTTCTCCTACAAGACGGATGTTCTTTCCAGGTGTCAAAAAACAACCAAATGACTGCCCA
                      ____________________________________________________________
consensus GCTTCTCCTACAAGACGGATGTTCTTTCCAGGTGTCAAAAAACAACCAAATGACTGCCCA
 
. : . : . : . : . : . :
JMFS029E05+ GCACTCCCTGTGAATGTTATGTTAAGCTGCCCAGCAAAACCAGTGTCACCATATTTCTTC
rJMSF012I20- CCACTCCCTATGAATGTTATGTTAAGCTACCCAGCAAAACCAGTGTCACCGTATTTCTTC
                      ____________________________________________________________
consensus GCACTCCCTGTGAATGTTATGTTAAGCTGCCCAGCAAAACCAGTGTCACCGTATTTCTTC
 
. : . : . : . : . : . :
JMFS029E05+ GCAATAACACCAGCTATGCGG-CCACAAGTAGCACGGTCAATATTATAAATTTGAATTGT
rJMSF012I20- GCAATAACACCAGCTATGCGGTCCACAAGTGGCACGGTCAATATTATAAATTTGAATTGT
                      ____________________________________________________________
consensus GCAATAACACCAGCTATGCGGTCCACAAGTGGCACGGTCAATATTATAAATTTGAATTGT
 
. : . : . : . : . : . :
JMFS029E05+ TTTGTTCACCACCTTTTCATTCTCAATTGCATCAGATAACTCTGGATCAGACAGTAGAAC
rJMSF012I20- TTTGTTCACCACCTTTTCATTCTCAATTGCATCAGATAACTCTGGGTCAGACAGTAGAAC
                      ____________________________________________________________
consensus TTTGTTCACCACCTTTTCATTCTCAATTGCATCAGATAACTCTGGGTCAGACAGTAGAAC
 
. : . : . : . : . : . :
JMFS029E05+ TTCATCAAGAACAGGACCATTGCTATGAA--CCTCCTGGTTCCTTATCATAGTACTGCTC
rJMSF012I20- TTCATCAAGAACAGGACCATTGCTATGAACCCCTCCTGGTTCCTTATCATTGTACTACTC
                      ____________________________________________________________
consensus TTCATCAAGAACAGGACCATTGCTATGAACCCCTCCTGGTTCCTTATCATTGTACTGCTC
 
. : . : . : . : . : . :
JMFS029E05+ CATTTGGGCATACCAACATT
rJMSF012I20- TGTTTGGGCATACCAACATTTTGGATGATGAACCGCCTGCGGGCGTGGCACCCACCCCAA
                      ____________________________________________________________
consensus TGTTTGGGCATACCAACATTTTGGATGATGAACCGCCTGCGGGCGTGGCACCCACCCCAA
 
. : . : . : . : . : . :
rJMSF012I20- CCCCCAATATTTCATAGTATTTTGTGTCCTTTACCATGGGCTTTAAGTGCTAGCAGTTCT
                      ____________________________________________________________
consensus CCCCCAATATTTCATAGTATTTTGTGTCCTTTACCATGGGCTTTAAGTGCTAGCAGTTCT
 
. : . : . : . : . : . :
rJMSF012I20- GCTTCGGGGAGAGAGTGCAATTGTGATTGAAGTCATCGATGAAAGCCAAAGACGAATCCT
                      ____________________________________________________________
consensus GCTTCGGGGAGAGAGTGCAATTGTGATTGAAGTCATCGATGAAAGCCAAAGACGAATCCT
 
. : . : . : . : . : . :
rJMSF012I20- GCTGCTGACCAGCCGCTCCTTCATCGTCTTCCACATCCATTCCCACCAGCATCTTCATCT
                      ____________________________________________________________
consensus GCTGCTGACCAGCCGCTCCTTCATCGTCTTCCACATCCATTCCCACCAGCATCTTCATCT
 
. : . : . : . : . : . :
rJMSF012I20- TCATTAGCATACTCTCCTATGGTAATTCCACTCTCGGAACTGCAAAAGAGGCAGGCAGCA
JMSF012I20+ GGAACTGCAAAAGAGGCAGGCAGCA
                      ____________________________________________________________
consensus TCATTAGCATACTCTCCTATGGTAATTCCACTCTCGGAACTGCAAAAGAGGCAGGCAGCA
 
. : . : . : . : . : . :
rJMSF012I20- CCAAGAAAACCAGTAGTATAAAAGACTATGGTGAGAAA
JMSF012I20+ CCAAGAAAACCAGTAGTATAAAAGACTATGGTGAGAAAAATAAGAAATAAAGATCAAGAA
                      ____________________________________________________________
consensus CCAAGAAAACCAGTAGTATAAAAGACTATGGTGAGAAAAATAAGAAATAAAGATCAAGAA
 
. : . : . : . : . : . :
JMSF012I20+ CCTGGTCAGAGAAGTAGATCTTGCAATTTCAGTGCCGCTGTGGAAGGAGGACGACCAAGA
                      ____________________________________________________________
consensus CCTGGTCAGAGAAGTAGATCTTGCAATTTCAGTGCCGCTGTGGAAGGAGGACGACCAAGA
 
. : . : . : . : . : . :
JMSF012I20+ CCCAAATCGTAGATCTAGACCGAGACACAAGCACAAGCGTTCGAGTCTACTGGATCTGTC
                      ____________________________________________________________
consensus CCCAAATCGTAGATCTAGACCGAGACACAAGCACAAGCGTTCGAGTCTACTGGATCTGTC
 
. : . : . : . : . : . :
JMSF012I20+ GCAGGGGAGGGCGGGGGAGAGGCGGAAGTCGGCATTCGAGTCTGCTGCGTCGTCGCACCA
                      ____________________________________________________________
consensus GCAGGGGAGGGCGGGGGAGAGGCGGAAGTCGGCATTCGAGTCTGCTGCGTCGTCGCACCA
 
. : . : . : . : . : . :
JMSF012I20+ CGAAGGCGGCTTGGTCCGTTGGTTGCTTGGAGCAGGCGAGGCACGGAGGCGGCGGAGGTT
                      ____________________________________________________________
consensus CGAAGGCGGCTTGGTCCGTTGGTTGCTTGGAGCAGGCGAGGCACGGAGGCGGCGGAGGTT
 
. : . : . : . : . : . :
JMSF012I20+ AGGGATTTGGATTTTGGAGAGAAGGGTGCGGCGGAGAGAGATAGAAAAGGAGGAAATCTC
                      ____________________________________________________________
consensus AGGGATTTGGATTTTGGAGAGAAGGGTGCGGCGGAGAGAGATAGAAAAGGAGGAAATCTC