Contig 010623: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
JMFS029E05+ ACAACTGCTTGAGCA
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consensus ACAACTGCTTGAGCA
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JMFS029E05+ AGAGAATTTCTAACAGCAAAACGTTCCCCTGCTTTCCCTCGTACAAATATCTGGCCACCG
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consensus AGAGAATTTCTAACAGCAAAACGTTCCCCTGCTTTCCCTCGTACAAATATCTGGCCACCG
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JMFS029E05+ GTTGCTCCATATAAGCATGTATTACCCACTATAGTGGCATCCTCTGGACAAAACCCAGTC
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consensus GTTGCTCCATATAAGCATGTATTACCCACTATAGTGGCATCCTCTGGACAAAACCCAGTC
. : . : . : . : . : . :
JMFS029E05+ TTTTCAACAGGAGTGACGACTATTTCTCCACCAGCCATACCCTTCCCCACATAGTCATTA
rJMSF012I20- CCTTCCCCACATAGTCATTA
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consensus TTTTCAACAGGAGTGACGACTATTTCTCCACCAGCCATACCCTTCCCCACATAGTCATTA
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JMFS029E05+ GCTTCTCCTACAAGACGGATGTTCATTCCAGGTGTCAAAAAACAACCAAATGACTGCCCA
rJMSF012I20- GCTTCTCCTACAAGACGGATGTTCTTTCCAGGTGTCAAAAAACAACCAAATGACTGCCCA
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consensus GCTTCTCCTACAAGACGGATGTTCTTTCCAGGTGTCAAAAAACAACCAAATGACTGCCCA
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JMFS029E05+ GCACTCCCTGTGAATGTTATGTTAAGCTGCCCAGCAAAACCAGTGTCACCATATTTCTTC
rJMSF012I20- CCACTCCCTATGAATGTTATGTTAAGCTACCCAGCAAAACCAGTGTCACCGTATTTCTTC
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consensus GCACTCCCTGTGAATGTTATGTTAAGCTGCCCAGCAAAACCAGTGTCACCGTATTTCTTC
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JMFS029E05+ GCAATAACACCAGCTATGCGG-CCACAAGTAGCACGGTCAATATTATAAATTTGAATTGT
rJMSF012I20- GCAATAACACCAGCTATGCGGTCCACAAGTGGCACGGTCAATATTATAAATTTGAATTGT
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consensus GCAATAACACCAGCTATGCGGTCCACAAGTGGCACGGTCAATATTATAAATTTGAATTGT
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JMFS029E05+ TTTGTTCACCACCTTTTCATTCTCAATTGCATCAGATAACTCTGGATCAGACAGTAGAAC
rJMSF012I20- TTTGTTCACCACCTTTTCATTCTCAATTGCATCAGATAACTCTGGGTCAGACAGTAGAAC
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consensus TTTGTTCACCACCTTTTCATTCTCAATTGCATCAGATAACTCTGGGTCAGACAGTAGAAC
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JMFS029E05+ TTCATCAAGAACAGGACCATTGCTATGAA--CCTCCTGGTTCCTTATCATAGTACTGCTC
rJMSF012I20- TTCATCAAGAACAGGACCATTGCTATGAACCCCTCCTGGTTCCTTATCATTGTACTACTC
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consensus TTCATCAAGAACAGGACCATTGCTATGAACCCCTCCTGGTTCCTTATCATTGTACTGCTC
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JMFS029E05+ CATTTGGGCATACCAACATT
rJMSF012I20- TGTTTGGGCATACCAACATTTTGGATGATGAACCGCCTGCGGGCGTGGCACCCACCCCAA
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consensus TGTTTGGGCATACCAACATTTTGGATGATGAACCGCCTGCGGGCGTGGCACCCACCCCAA
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rJMSF012I20- CCCCCAATATTTCATAGTATTTTGTGTCCTTTACCATGGGCTTTAAGTGCTAGCAGTTCT
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consensus CCCCCAATATTTCATAGTATTTTGTGTCCTTTACCATGGGCTTTAAGTGCTAGCAGTTCT
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rJMSF012I20- GCTTCGGGGAGAGAGTGCAATTGTGATTGAAGTCATCGATGAAAGCCAAAGACGAATCCT
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consensus GCTTCGGGGAGAGAGTGCAATTGTGATTGAAGTCATCGATGAAAGCCAAAGACGAATCCT
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rJMSF012I20- GCTGCTGACCAGCCGCTCCTTCATCGTCTTCCACATCCATTCCCACCAGCATCTTCATCT
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consensus GCTGCTGACCAGCCGCTCCTTCATCGTCTTCCACATCCATTCCCACCAGCATCTTCATCT
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rJMSF012I20- TCATTAGCATACTCTCCTATGGTAATTCCACTCTCGGAACTGCAAAAGAGGCAGGCAGCA
JMSF012I20+ GGAACTGCAAAAGAGGCAGGCAGCA
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consensus TCATTAGCATACTCTCCTATGGTAATTCCACTCTCGGAACTGCAAAAGAGGCAGGCAGCA
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rJMSF012I20- CCAAGAAAACCAGTAGTATAAAAGACTATGGTGAGAAA
JMSF012I20+ CCAAGAAAACCAGTAGTATAAAAGACTATGGTGAGAAAAATAAGAAATAAAGATCAAGAA
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consensus CCAAGAAAACCAGTAGTATAAAAGACTATGGTGAGAAAAATAAGAAATAAAGATCAAGAA
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JMSF012I20+ CCTGGTCAGAGAAGTAGATCTTGCAATTTCAGTGCCGCTGTGGAAGGAGGACGACCAAGA
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consensus CCTGGTCAGAGAAGTAGATCTTGCAATTTCAGTGCCGCTGTGGAAGGAGGACGACCAAGA
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JMSF012I20+ CCCAAATCGTAGATCTAGACCGAGACACAAGCACAAGCGTTCGAGTCTACTGGATCTGTC
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consensus CCCAAATCGTAGATCTAGACCGAGACACAAGCACAAGCGTTCGAGTCTACTGGATCTGTC
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JMSF012I20+ GCAGGGGAGGGCGGGGGAGAGGCGGAAGTCGGCATTCGAGTCTGCTGCGTCGTCGCACCA
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consensus GCAGGGGAGGGCGGGGGAGAGGCGGAAGTCGGCATTCGAGTCTGCTGCGTCGTCGCACCA
. : . : . : . : . : . :
JMSF012I20+ CGAAGGCGGCTTGGTCCGTTGGTTGCTTGGAGCAGGCGAGGCACGGAGGCGGCGGAGGTT
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consensus CGAAGGCGGCTTGGTCCGTTGGTTGCTTGGAGCAGGCGAGGCACGGAGGCGGCGGAGGTT
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JMSF012I20+ AGGGATTTGGATTTTGGAGAGAAGGGTGCGGCGGAGAGAGATAGAAAAGGAGGAAATCTC
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consensus AGGGATTTGGATTTTGGAGAGAAGGGTGCGGCGGAGAGAGATAGAAAAGGAGGAAATCTC