Contig 010620:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF042A06-                                   GTGAAAAACTTAATATTTTTTAGTTAAAATATCAT
rJMSF012D03-                  TATATGATAAGTCTTGTGTGAAAAACTTAATATTTTTTAGTTAAAATATCAT
                      ____________________________________________________________
consensus                     TATATGATAAGTCTTGTGTGAAAAACTTAATATTTTTTAGTTAAAATATCAT
 
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rJMFF042A06-          -GTCATATACTTTCACCCAAAAGTATTACGTATCTCACGTAATTACACACAAAATTTATT
rJMSF012D03-          GGTCATATACTTTCACCCAAAAGTATTACGTATCTCACGTAATTACACACAAAATTTATT
                      ____________________________________________________________
consensus             GGTCATATACTTTCACCCAAAAGTATTACGTATCTCACGTAATTACACACAAAATTTATT
 
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rJMFF042A06-          CCAATATAAAATGCACACCAAAATAAGAAGTAGATCGAAATAAAGTTCGAGGGAGTAGTA
rJMSF012D03-          CCAATATAAAATGCACACCAAAATAAGAAGTAGATCGAAATAAAGTTCGAGGGAATAGTA
                      ____________________________________________________________
consensus             CCAATATAAAATGCACACCAAAATAAGAAGTAGATCGAAATAAAGTTCGAGGGAGTAGTA
 
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rJMFF042A06-          GTTCATTTCATTATATTGGAGTGCAATATAATCAACCCTCCATTCCTTTCCTGGCGATAA
rJMSF012D03-          GTTCATTTCATTATATTGGAGTGCAATATAATCAACCCTCCATTCCTTTCCTGGCGATAA
                      ____________________________________________________________
consensus             GTTCATTTCATTATATTGGAGTGCAATATAATCAACCCTCCATTCCTTTCCTGGCGATAA
 
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rJMFF042A06-          AATCCTTAACAAACAGTGGGAGGTGATGGAGAAGAGATGCAGCCATAGAGAGATGACCAG
rJMSF012D03-          AATCCTTAACAAACAGTGGGAGGTGATGGAGAAGAGATGCAGCCATAGAGAGATGACCAG
                      ____________________________________________________________
consensus             AATCCTTAACAAACAGTGGGAGGTGATGGAGAAGAGATGCAGCCATAGAGAGATGACCAG
 
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rJMFF042A06-          CAGAGAACCATGGCGGCGGCTTCTTCTTCAGCACTACATTCACCGTCCTCTTTGCAAACT
rJMSF012D03-          CAGAGAACCATGGCGGCGGCTTCTTCTTCAGCACTACATTCACCGTCCTCTTTGCAAACT
                      ____________________________________________________________
consensus             CAGAGAACCATGGCGGCGGCTTCTTCTTCAGCACTACATTCACCGTCCTCTTTGCAAACT
 
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rJMFF042A06-          CTTCTGTAGGGGTTGACCTTGCTGTACTTTGCGAGAAGCGTGCTCTCGCTTGGATTGCTT
rJMSF012D03-          CTTCTGTAGGGGTTGACCTTGCTGTACTTTGCGAGAAGCGTGCTCTCGCTTGGATTGCTT
                      ____________________________________________________________
consensus             CTTCTGTAGGGGTTGACCTTGCTGTACTTTGCGAGAAGCGTGCTCTCGCTTGGATTGCTT
 
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rJMFF042A06-          CTTCAAATTGCTGGTACAACTTCCATTGCGACACCCCATTGTTGTTGCAGCTGGCAATAG
rJMSF012D03-          CTTCAAATTGCTGGTACAACTTCCATTGCGACACCCCATTGTTGTTGCAGCTGGCAATAG
JMFF050D04+                                                                GCAATAG
JMFF042A06+                                                                      G
                      ____________________________________________________________
consensus             CTTCAAATTGCTGGTACAACTTCCATTGCGACACCCCATTGTTGTTGCAGCTGGCAATAG
 
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rJMFF042A06-          CGGAGTTTCCTATGTTGGACTTCACAAGTCCGGGGACAACATTTATGACATCGATCCCAA
rJMSF012D03-          CGGAGTTTCCTATGTTGGACTTCACAAGTCCGGGGACAACATTTATGACATCGATCCCAA
JMFF050D04+           CGGAGTTTCCTATGTTGGACTTCACAAGTCCGGGGACAACATTTATGACATCGATCCCAA
JMFF042A06+           CGGAGTTTCCTATGTTGGACTTCACAAGTCCGGGGACAACATTTATGACATCGATCCCAA
                      ____________________________________________________________
consensus             CGGAGTTTCCTATGTTGGACTTCACAAGTCCGGGGACAACATTTATGACATCGATCCCAA
 
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rJMFF042A06-          ATGGCCGGAGTTCCAGTCTCAAGGCATCAGTTAGGGCGTGGAGAGCAGCTTTTGAAGAAC
rJMSF012D03-          ATGGCCGGAGTTCCAGTCTCAAGGCATCAGTTAGGGCGTGGAGAGCAGCTTTTGAAGAAC
JMFF050D04+           ATGGCCGGAGTTCCAGTCTCAAGGCATCAGTTAGGGCGTGGAGAGCAGCTTTTGAAGAAC
JMFF042A06+           ATGGCCGGAGTTCCAGTCTCAAGGCATCAGTTAGGGCGTGGAGAGCAGCTTTTGAAGAAC
                      ____________________________________________________________
consensus             ATGGCCGGAGTTCCAGTCTCAAGGCATCAGTTAGGGCGTGGAGAGCAGCTTTTGAAGAAC
 
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rJMFF042A06-          TGTAACCAGCTGCAAACGGTGCAGGGGCAAAGGCAACAATACTTCCA             
rJMSF012D03-          TGTAACCAGCTGCAAACGGTGCAGGGGCAAAGGCAACAATACTTCCAACGTTTACAATCT
JMFF050D04+           TGTAACCAGCTGCAAACGGTGCAGGGGCAAAGGCAACAATACTTCCAACGTTTACAATCT
JMFF042A06+           TGTAACCAGCTGCAAACGGTGCAGGGGCAAAGGCAACAATACTTCCAACGTTTACAATCT
                      ____________________________________________________________
consensus             TGTAACCAGCTGCAAACGGTGCAGGGGCAAAGGCAACAATACTTCCAACGTTTACAATCT
 
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rJMSF012D03-          TTCCTTTCCTCCTGGACGCCATGTGAGGAACCACAGCTTGAACTAACCTCAACGGACCCA
JMFF050D04+           TTCCTTTCCTCCTGGACGCCATGTGAGGAACCACAGCTTGAACTAACCTCAACGGACCCA
JMFF042A06+           TTCCTTTCCTCCTGGACGCCATGTGAGGAACCACAGCTTGAACTAACCTCAACGGACCCA
                      ____________________________________________________________
consensus             TTCCTTTCCTCCTGGACGCCATGTGAGGAACCACAGCTTGAACTAACCTCAACGGACCCA
 
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rJMSF012D03-          AGACGTTGGTATCGTAAGTGTTTTGAATGGCAGATAAGGGGATCTCACCTACAG      
JMFF050D04+           AGACGTTGGTATCGTAAGTGTTTTGAATGGCAGATAAAGGGATCTCACCTACAGGCCCAA
JMFF042A06+           AGACGTTGGTATCGTAAGTGTTTTGAATGGCAGATAAAGGGATCTCACCTACAGGCCCAA
                      ____________________________________________________________
consensus             AGACGTTGGTATCGTAAGTGTTTTGAATGGCAGATAAAGGGATCTCACCTACAGGCCCAA
 
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JMFF050D04+           TACAGTGCACTCCCGCATTGTTGACCACAACATCAATCTGCCCAAACTTCTCAACAACCT
JMFF042A06+           TACAGTGCACTCCCGCATTGTTGACCACAACATCAATCTGCCCAAACTTCTCAACAACCT
JMSF012D03+                                   CCACAACATCAATCTGCCCAAACTTCTCAACAACTT
                      ____________________________________________________________
consensus             TACAGTGCACTCCCGCATTGTTGACCACAACATCAATCTGCCCAAACTTCTCAACAACCT
 
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JMFF050D04+           CAGAAACCACGCGCCTTACTTTCTGCTCAGACTGAACGTCCAGTTCTTGCAGGTGAAACC
JMFF042A06+           CAGAAACCACGCGCCTTACTTTCTGCTCAGACTGAACGTCCAGTTCTTGCAGGTGAAACC
JMSF012D03+           CAGAAACCACGCGCCTTACTTTCTGCTCAGACTGAACGTCCAGTTCTTGCAGGTGAAACC
                      ____________________________________________________________
consensus             CAGAAACCACGCGCCTTACTTTCTGCTCAGACTGAACGTCCAGTTCTTGCAGGTGAAACC
 
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JMFF050D04+           TGGGGTCATTTTCTAAGTCGGACATGGCGGATCGTGACCGAGCTGTGGCCACCACCATGC
JMFF042A06+           TGGGGTCATTTTCTAAGTCGGACATGGCGGATCGTGACCGAGCTGTGGCCACCACCATGC
JMSF012D03+           TGGGGTCATTTTCTAAGTCGGACATGGCGGATCGTGACCGAGCTGTGGCCACCACCATGC
                      ____________________________________________________________
consensus             TGGGGTCATTTTCTAAGTCGGACATGGCGGATCGTGACCGAGCTGTGGCCACCACCATGC
 
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JMFF050D04+           AATTCTCGGCGGCGAAAGCTTGTGCCAAAGCATGCCCAATTCCACCCTTTGAACACCCTG
JMFF042A06+           AATTCTCGGCGGCGAAAGCTTGTGCCAAAGCATGCCCAATTCCACCCTTTGAACACCCTG
JMSF012D03+           AATTCTCGGCGGCGAAAGCTTGTGCCAAAGCATGCCCAATTCCACCCTTTGAACACCCTG
                      ____________________________________________________________
consensus             AATTCTCGGCGGCGAAAGCTTGTGCCAAAGCATGCCCAATTCCACCCTTTGAACACCCTG
 
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JMFF050D04+           TTATCAGAACTACTGCTTTGGTGTCCTTTTGATCCATTCAGAATTCAAATTTATGGAAGG
JMFF042A06+           TTATCAGAACTACTGCTTTGGTGTCCTTTTGATCCATTCAGAATTCAAATTTATGGAAGG
JMSF012D03+           TTATCAGAACTACTGCTTTGGTGTCCTTTTGATCCATTCAGAATTCAAATTTATGGAAGG
                      ____________________________________________________________
consensus             TTATCAGAACTACTGCTTTGGTGTCCTTTTGATCCATTCAGAATTCAAATTTATGGAAGG
 
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JMFF050D04+           AGTTGTGATCTCAACATACACAC                                     
JMFF042A06+           AGTTGTGATCTCAACATACACACATTTGGATGACTAGTTTG                   
JMSF012D03+           AGTTGTGATCTCAACATACACACATTTGGATGACTAGTTTGAAAAATAAGAAAATCACCA
                      ____________________________________________________________
consensus             AGTTGTGATCTCAACATACACACATTTGGATGACTAGTTTGAAAAATAAGAAAATCACCA