| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004J03 | Sequence | 556 | 010619 (6) | ref|XP_009626884.1| | 2e-28 | PREDICTED: cyclin-dependent kinase inhibitor 5-like [Nicotiana tomentosiformis] | 786 | 010619 (6) | ref|XP_009789168.1| | 1e-52 | PREDICTED: cyclin-dependent kinase inhibitor 5-like [Nicotiana sylvestris] |
| JMFF025P19 | Sequence | 559 | 010619 (6) | ref|XP_009626884.1| | 5e-30 | PREDICTED: cyclin-dependent kinase inhibitor 5-like [Nicotiana tomentosiformis] | 778 | 010619 (6) | ref|XP_009789168.1| | 9e-53 | PREDICTED: cyclin-dependent kinase inhibitor 5-like [Nicotiana sylvestris] |
| JMSF011L02 | Sequence | 442 | 010619 (6) | ref|XP_009342425.1| | 7e-15 | PREDICTED: cyclin-dependent kinase inhibitor 4-like [Pyrus x bretschneideri] | 798 | 010619 (6) | ref|XP_009789168.1| | 4e-53 | PREDICTED: cyclin-dependent kinase inhibitor 5-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF025P19- TAATTCTTAGTTCCATCAGTACATGTATGGG
rJMFF004J03- TGGGTTCTTTTATTCATAATTCTTAGTTCCATCAGTACATGTATGGG
rJMSF011L02- GTATGGG
____________________________________________________________
consensus TGGGTTCTTTTATTCATAATTCTTAGTTCCATCAGTACATGTATGGG
. : . : . : . : . : . :
rJMFF025P19- GTGGATGGAAAGTGAAATTACATTGCAATGGAAGACCACAAGATCAACAGACTTGTGTAC
rJMFF004J03- GTGGATGGAAAGTGAAATTACATTGCAATGGAAGACCACAAGATCAACAGACTTGTGTAC
rJMSF011L02- GTGGATGGAAAGTGAAATTACATTGCAATGGAAGACCACAAGATCAACAGACTTGTGTAC
____________________________________________________________
consensus GTGGATGGAAAGTGAAATTACATTGCAATGGAAGACCACAAGATCAACAGACTTGTGTAC
. : . : . : . : . : . :
rJMFF025P19- TAACCAAGTTCATTGAATGCGAATACTAACAAACACTACTAATCCTACAAGTACCTGTAA
rJMFF004J03- TAACCAAGTTCATTGAATGCGAATACTAACAAACACTACTAATCCTACAAGTACCTGTAA
rJMSF011L02- TAACCAAGTTCATTGAATGCGAATACTAACAAACACTACTAATCCTACAAGTACCTGTAA
____________________________________________________________
consensus TAACCAAGTTCATTGAATGCGAATACTAACAAACACTACTAATCCTACAAGTACCTGTAA
. : . : . : . : . : . :
rJMFF025P19- GCCCATCCCCTTCTCCTTTGATGATCTGTTAGATAGAAAGGTTTTTCTTGTATTTGTTGT
rJMFF004J03- GCCCATCCCCTTCTCCTTTGATGATCTGTTAGATAGAAAGGTTTTTCTTGTATTTGTTGT
rJMSF011L02- GCCCATCCCCTTCTCCTTTGATGATCTGTTAGATAGAAAGGTTTTTCTTGTATTTGTTGT
____________________________________________________________
consensus GCCCATCCCCTTCTCCTTTGATGATCTGTTAGATAGAAAGGTTTTTCTTGTATTTGTTGT
. : . : . : . : . : . :
rJMFF025P19- CAGTTTCGAGCGTTACGTTACAGATCATTAGTCTACAACCTACCTCACTGCCCTAAGTTC
rJMFF004J03- CAGTTTCGAGCGTTACGTTACAGATCATTAGTCTACAACCTACCTCACTGCCCTAAGTTC
rJMSF011L02- CAGTTTCGAGCGTTACGTTACAGATCATTAGTCTACAACCTACCTCACTGCCCTAAGTTC
____________________________________________________________
consensus CAGTTTCGAGCGTTACGTTACAGATCATTAGTCTACAACCTACCTCACTGCCCTAAGTTC
. : . : . : . : . : . :
rJMFF025P19- TTTACAAGTAAAAGGATGACTAAAAAATGAAGTTTCCCTACCTCTCCCTAGTAAATGCAG
rJMFF004J03- TTTACAAGTAAAAGGATGACTAAAAAATGAAGTTTCCCTACCTCTCCCTAGTAAATGCAG
rJMSF011L02- TTTACAAGTAAAAGGATGACTAAAAAATGAAGTTTCCCTACCTCTCCCTAGTAAATGCAG
____________________________________________________________
consensus TTTACAAGTAAAAGGATGACTAAAAAATGAAGTTTCCCTACCTCTCCCTAGTAAATGCAG
. : . : . : . : . : . :
rJMFF025P19- GCAGGGCAGGTCCAGGTCCAGATGGAATGGAACACTGACACACCTTTTAAGGGTTTACTT
rJMFF004J03- GCAGGGCAGGTCCAGGTCCAGATGGAATGGAACACTGACACACCTTTTAAGGGTTTACTT
rJMSF011L02- GCAGGACAGGTCCAGGTCCAGATGGAATGGAACACTGACACACCTTTTAAGGGTTTACTT
____________________________________________________________
consensus GCAGGGCAGGTCCAGGTCCAGATGGAATGGAACACTGACACACCTTTTAAGGGTTTACTT
. : . : . : . : . : . :
rJMFF025P19- TCTCCCATTCAAAGCGTCCAGGAAGAGGCTTCTCATTCATTGGATCAAAGTTGTACTTGT
rJMFF004J03- TCTCCCATTCAAAGCGTCCAGGAAGAGGCTTCTCATTCATTGGATCAAAGTTGTACTTGT
rJMSF011L02- TCTCCCATTCAAAGCGTCCAGGAAGAGGCTTCTCATTCATTGGATCAAAGTTGTACTTGT
____________________________________________________________
consensus TCTCCCATTCAAAGCGTCCAGGAAGAGGCTTCTCATTCATTGGATCAAAGTTGTACTTGT
. : . : . : . : . : . :
rJMFF025P19- CAATAAATTTTCTATGTTGCTCCTCTTCTGCCCCAGCAAAAAATTCATTTATTTCATGTG
rJMFF004J03- CAATAAATTTTCTATGTTGCTCCTCTTCTGCCCCAGCAAAAAATTCATTTATTTCATGTG
rJMSF011L02- CAATAAATTTTCTATGTTGCTCCTCTTCTGCCCCAGCAAAAAATTCATTTATTTCATGTG
____________________________________________________________
consensus CAATAAATTTTCTATGTTGCTCCTCTTCTGCCCCAGCAAAAAATTCATTTATTTCATGTG
. : . : . : . : . : . :
rJMFF025P19- TTGTTGGGATGTGTCTTCGCAATGAGTTATGCATTCTGCTGTTGGCTTCACTTGCACTGG
rJMFF004J03- TTGTTGGGATGTGTCTTCGCAATGAGTTATGCATTCTGCTGTTGGCTTCACTTGCACTGG
rJMSF011L02- TTGTTGGGATGTGTCTTCGCAATGAGTTATGCATTCTGCTGTTGGCTTCACTTGCACTGG
____________________________________________________________
consensus TTGTTGGGATGTGTCTTCGCAATGAGTTATGCATTCTGCTGTTGGCTTCACTTGCACTGG
. : . : . : . : . : . :
rJMFF025P19- TTGGCCTTGTACTGGAGCCAGGGGTTTGAGCGGCATCCGAATCTCTTATCAAACTGCAAG
rJMFF004J03- TTGGCCTTGTACTGGAGCCAGGGGTTTGAGCGGCATCCGAATCTCTTATCAAACTGCAAG
rJMSF011L02- TTGGCCTTGTACTGGAGCCAGGGGTTTGAGCGGCATCCGAATCTCTTATCAAACTGCAAG
____________________________________________________________
consensus TTGGCCTTGTACTGGAGCCAGGGGTTTGAGCGGCATCCGAATCTCTTATCAAACTGCAAG
. : . : . : . : . : . :
rJMFF025P19- GTGTGCTTTCCCTANTGGTCCTCTCTCTACCTTCAAAATCGGGCAAATTCTCTCCAAATG
rJMFF004J03- GTGTGCTTTCCCTAGTGGTCCTCTCTCTACCTTCAAAATCGGGCAAATTCTCTCCAAATG
rJMSF011L02- GTGTGCTTTCCCTAGTGGTCCTCTCTCTACCTTCAAAATCGGGCAAATTCTCTCCAAATG
JMFF025P19+ CTCTACCTTCAAAATCGGGCAAATTCTCTCCAAATG
JMFF004J03+ TTCAAAATCGGGCAAATTCTCTCCAAATG
____________________________________________________________
consensus GTGTGCTTTCCCTAGTGGTCCTCTCTCTACCTTCAAAATCGGGCAAATTCTCTCCAAATG
. : . : . : . : . : . :
rJMFF025P19- ACGCTTCGTCACCCGCATCGCCGGC-GGTATTGTGAACTTTGTTACTATTTTCCTCGAAA
rJMFF004J03- ACGCTTCGTCACCCGCATCGCCGGCGGGTATTGTGAACTTTGTTACTATTTTCCTCGAAA
rJMSF011L02- ACGCTTCGTCACCCGCATCGCCGGC-GGTATTGTGAACTTTGTTACTATTTTCCTCGAAA
JMFF025P19+ ACGCTTCGTCACCCGCATCGCCGGC-GGTATTGTGAACTTTGTTACTATTTTCCTCGAAA
JMFF004J03+ ACGCTTCGTCACCCGCATCGCCGGC-GGTATTGTGAACTTTGTTACTATTTTCCTCGAAA
____________________________________________________________
consensus ACGCTTCGTCACCCGCATCGCCGGC-GGTATTGTGAACTTTGTTACTATTTTCCTCGAAA
. : . : . : . : . : . :
rJMFF025P19- GCACCGCACTTTT
rJMFF004J03- GCACCGCACTTTT
rJMSF011L02- GCACCGCACTTTCCCGGTAAAATGTTCTCCTCCTTTATGACGCCNACCAAACACTCATT
JMFF025P19+ GCACCGCACTTTTCCGGTAAAATGTTCTCCTCCTTTATGACGCCAACCAAACACTCATTT
JMFF004J03+ GCACCGCACTTTTCCGGTAAAATGTTCTCCTCCTTTATGACGCCAACCAAACACTCATTT
____________________________________________________________
consensus GCACCGCACTTTTCCGGTAAAATGTTCTCCTCCTTTATGACGCCAACCAAACACTCATTT
. : . : . : . : . : . :
JMFF025P19+ TCCTCCTTATTCACTGACCCAGAAATCGCAGAACAGCCGTGTCTCACCCTCGAACTTGCT
JMFF004J03+ TCCTCCTTATTCACTGACCCAGAAATCGCAGAACAGCCGTGTCTCACCCTCGAACTTGCT
____________________________________________________________
consensus TCCTCCTTATTCACTGACCCAGAAATCGCAGAACAGCCGTGTCTCACCCTCGAACTTGCT
. : . : . : . : . : . :
JMFF025P19+ CTGGTACTCTGATTTTGTTTCGAGTTGGGGGCCAGGCTAGGGTTGGAGTCCTTCGGAGAG
JMFF004J03+ CTGGTACTCTGATTTTGTTTCGAGTTGGGGGCCAGGCTAGGGTTGGAGTCCTTCGGAGAG
____________________________________________________________
consensus CTGGTACTCTGATTTTGTTTCGAGTTGGGGGCCAGGCTAGGGTTGGAGTCCTTCGGAGAG
. : . : . : . : . : . :
JMFF025P19+ GGTTTCTGCCTCCGCGAGTCCAAACCAATTGGGGGTTTCTGCAGCCGCCGGCTTCGGAGC
JMFF004J03+ GGTTTCTGCCTCCGCGAGTCCAAACCAATTGGGGGTTTCTGCAGCCGCCGGCTTCGGAGC
JMSF011L02+ CTGCAGCCGCCGGCTTCGGAGC
____________________________________________________________
consensus GGTTTCTGCCTCCGCGAGTCCAAACCAATTGGGGGTTTCTGCAGCCGCCGGCTTCGGAGC
. : . : . : . : . : . :
JMFF025P19+ TGCAGGTAGGACCCACTGTCACCGGCACAGCAAATTTCATCCGCCGACCGGCGTAAGCGT
JMFF004J03+ TGCAGGTAGGACCCACTGTCACCGGCACAGCAAATTTCATCCGCCGACCGGCGTAAGCGT
JMSF011L02+ TGCAGGTAGGACCCACTGTCACCGGCACAGCAAATTTCATCCGCCGACCGGCGTAAGCGT
____________________________________________________________
consensus TGCAGGTAGGACCCACTGTCACCGGCACAGCAAATTTCATCCGCCGACCGGCGTAAGCGT
. : . : . : . : . : . :
JMFF025P19+ TGTAGGGCTAGGGTTTTGGCCCGAGTACGTACCCCTGAAAACGATTGTGCGTGAGTGACC
JMFF004J03+ TGTAGGGCTAGGGTTTTGGCCCGAGTACGTACCCCTGAAAACGATTGTGCGTGAGTGACC
JMSF011L02+ TGTAGGGCTAGGGTTTTGGCCCGAGTACGTACCCCTGAAAACGATTGTGCGTGAGTGACC
____________________________________________________________
consensus TGTAGGGCTAGGGTTTTGGCCCGAGTACGTACCCCTGAAAACGATTGTGCGTGAGTGACC
. : . : . : . : . : . :
JMFF025P19+ TCAAGGAGAGCCACCTCGCCCGCAGCTTTTGACTTCTTCATATACCTGCCCATCTCTCTT
JMFF004J03+ TCAAGGAGAGCCACCTCGCCCGCAGCTTTTGACTTCTTCATATACCTGCCCATCTCTCTT
JMSF011L02+ TCAAGGAGAGCCACCTCGCCCGCAGCTTTTGACTTCTTCATATACCTGCCCATCTCTCTT
____________________________________________________________
consensus TCAAGGAGAGCCACCTCGCCCGCAGCTTTTGACTTCTTCATATACCTGCCCATCTCTCTT
. : . : . : . : . : . :
JMFF025P19+ TCTCTCTCTAAAACTCCCTCCCCTGCCTCGCTAATCAACTCTCA
JMFF004J03+ TCTCTCTCTAAAACTCCCTCCCCTGCCTCGCTAATCAACTCTCA
JMSF011L02+ TCTCTCTCTAAAACTCCCTCCCCTGCCTCGCTAATCAACTCTCATGGATAAAATAATATA
____________________________________________________________
consensus TCTCTCTCTAAAACTCCCTCCCCTGCCTCGCTAATCAACTCTCATGGATAAAATAATATA
. : . : . : . : . : . :
JMSF011L02+ CTCCGTATATACATATATATACAAACATACATGTGGGGGTGTATGGGTGTGTTCCTGTGT
____________________________________________________________
consensus CTCCGTATATACATATATATACAAACATACATGTGGGGGTGTATGGGTGTGTTCCTGTGT
. : . : . : . : . : . :
JMSF011L02+ GTTAGTGTGTATCGATAGAGACAGCAAGAGAGAGGGAAAGAAGAGAGGATTTCAGTTATC
____________________________________________________________
consensus GTTAGTGTGTATCGATAGAGACAGCAAGAGAGAGGGAAAGAAGAGAGGATTTCAGTTATC
. : . : . : . : . : . :
JMSF011L02+ GGTTGGAGAAGAGAAAGGGGAGGTGGGTTTAGCCGTTGATGGTTAGAGAGAGAGAGAGCC
____________________________________________________________
consensus GGTTGGAGAAGAGAAAGGGGAGGTGGGTTTAGCCGTTGATGGTTAGAGAGAGAGAGAGCC