Contig 010617:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF048A11-                    CCTTATGGCGGATCACCCTGGAGAGXXXXXXXXXXXXXXXXXXXGAAAAA
                      ____________________________________________________________
consensus                       CCTTATGGCGGATCACCCTGGAGAGNNNNNNNNNNNNNNNNNNNGAAAAA
 
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rJMFF048A11-          AAATACTATGTATATTTAAAAAAGAAAAATCATGAGGCCTCTACGTGGCAACATTATTAC
rJMSF011K02-                   GTATATTTAAAAAAGAAAAATCATGAGGCCTCTACGTGGCAACATTATTAC
                      ____________________________________________________________
consensus             AAATACTATGTATATTTAAAAAAGAAAAATCATGAGGCCTCTACGTGGCAACATTATTAC
 
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rJMFF048A11-          TATGGTAACAAGAATTAACAGTGATAAGAATCGAACCAATCTTTACCTCCTCCCGCTGAA
rJMSF011K02-          TATGGTAACAAGAATTAACAGTGATAAGAATCGAACCAATCTTTACCTCCTCCCGCTGAA
                      ____________________________________________________________
consensus             TATGGTAACAAGAATTAACAGTGATAAGAATCGAACCAATCTTTACCTCCTCCCGCTGAA
 
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rJMFF048A11-          CAATCACACAACCATATATCTATAGAAATGGCAAATCTACCAAACTATCAATGCAAAGGA
rJMSF011K02-          CAATCACACAACCATATATCTATAGAAATGGCAAATCTACCAAACTATCAATGCAAAGGA
                      ____________________________________________________________
consensus             CAATCACACAACCATATATCTATAGAAATGGCAAATCTACCAAACTATCAATGCAAAGGA
 
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rJMFF048A11-          TTTGTGTATAGATGACTTACAGAACGGCTACACGATCAAAAGCTGCACGCATTTTAGAGC
rJMSF011K02-          TTTGTGTATAGATGACTTACAGAACGGCTACACGATCAAAAGCTGCACGCATTTTAGAGC
                      ____________________________________________________________
consensus             TTTGTGTATAGATGACTTACAGAACGGCTACACGATCAAAAGCTGCACGCATTTTAGAGC
 
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rJMFF048A11-          AATGAACCGCGGGCGTCTTGTCCGTACTGAGATCGCCGGATATTATCCCGACGCTTCTTG
rJMSF011K02-          AATGAACCGCGGGCGTCTTGTCCGTACTGAGATCGCCGGATATTATCCCGACGCTTCTTG
JMFF048A11+                  CGCGGGCGTCTTGTCCGTACTGAGATCGCCGGATATTATCCCGACGCTTCTTG
                      ____________________________________________________________
consensus             AATGAACCGCGGGCGTCTTGTCCGTACTGAGATCGCCGGATATTATCCCGACGCTTCTTG
 
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rJMFF048A11-          TAAACCAGCGCTCCCAGTCCAGCGACGCACGCGCCGGCCACGACTCCAACAGCTATTCCC
rJMSF011K02-          TAAACCAGCGCTCCCAGTCCAGCGACGCACGCGCCGGCCACGACTCCGACAGCTATTCCC
JMFF048A11+           TAAACCAGCGCTCCCAGTCCAGCGACGCACGCGCCGGCCACGACTCCGACAGCTATTCCC
                      ____________________________________________________________
consensus             TAAACCAGCGCTCCCAGTCCAGCGACGCACGCGCCGGCCACGACTCCGACAGCTATTCCC
 
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rJMFF048A11-          ACCTTCTTTCCCCTGCCTGATGACTTCTCCTCGCTCGTACTGACCTGCCTCACATCTTTC
rJMSF011K02-          ACCTTCTTTCCCCTGCCTGATGACTTCTCCTCGCTCGTACTGACCTGCCTCACATCTTTC
JMFF048A11+           ACCTTCTTTCCCCTGCCTGATGACTTCTCCTCGCTCGTACTGACCTGCCTCACATCTTTC
JMSF011K02+                                        CTCGCTCGTACTGACCTGCCTCACATCTTTC
                      ____________________________________________________________
consensus             ACCTTCTTTCCCCTGCCTGATGACTTCTCCTCGCTCGTACTGACCTGCCTCACATCTTTC
 
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rJMFF048A11-          GCAACTTGAGAATCCGAAGCCGGAGAGTATGCCTTTGCATCCGCCGGTGACGGCGATGGT
rJMSF011K02-          GCAACTTGAGAATCCGAAGCCGGAGAGTATGCCTTTGCATCCGCCGGTGACGGCGATGGT
JMFF048A11+           GCAACTTGAGAATCCGAAGCCGGAGAGTATGCCTTTGCATCCGCCGGTGACGGCGATGGT
JMSF011K02+           GCAACTTGAGAATCCGAAGCCGGAGAGTATGCCTTTGCATCCGCCGGTGACGGCGATGGT
                      ____________________________________________________________
consensus             GCAACTTGAGAATCCGAAGCCGGAGAGTATGCCTTTGCATCCGCCGGTGACGGCGATGGT
 
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rJMFF048A11-          GAGCCGAGATCTAAGG                                            
rJMSF011K02-          GAGCCGAGATCTAAGGGCGGAGGAGAACTAGCATCCTGTGGAGGAGCCCTAGAGGGACTA
JMFF048A11+           GAGCCGAGATCTAAGGGCGGAGGAGAACTAGCATCCTGTGGAGGAGCCCTAGAGGGACTA
JMSF011K02+           GAGCCGAGATCTAAGGGCGGAGGAGAACTAGCATCCTGTGGAGGAGCCCTAGAGGGACTA
                      ____________________________________________________________
consensus             GAGCCGAGATCTAAGGGCGGAGGAGAACTAGCATCCTGTGGAGGAGCCCTAGAGGGACTA
 
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rJMSF011K02-          TCTGGAGTAGGCGCAGGAGCCGGCGGGGAGAAATCGTCGGTTCCGGTTACCGGTGCCGGC
JMFF048A11+           TCTGGAGTAGGCGCAGGAGCCGGCGGGGAGAAATCGTCGGTTCCGGTTACCGGTGCCGGC
JMSF011K02+           TCTGGAGTAGGCGCAGGAGCCGGCGGGGAGAAATCGTCGGTTCCGGTTACCGGTGCCGGC
                      ____________________________________________________________
consensus             TCTGGAGTAGGCGCAGGAGCCGGCGGGGAGAAATCGTCGGTTCCGGTTACCGGTGCCGGC
 
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rJMSF011K02-          GCTGGTGAAGCCGTCGGAGAATCTTCGGCCAGGGACCGATGTAGCGCCAGCATTGCGAAG
JMFF048A11+           GCTGGTGAAGCCGTCGGAGAATCTTCGGCCAGGGACCGATGTAGCGCCAGCACCGCGAAG
JMSF011K02+           GCTGGTGAAGCCGTCGGAGAATCTTCGGCCAGGGACCGATGTAGCGCCAGCATTGCGAAG
                      ____________________________________________________________
consensus             GCTGGTGAAGCCGTCGGAGAATCTTCGGCCAGGGACCGATGTAGCGCCAGCATTGCGAAG
 
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rJMSF011K02-          AAAAGAACAACAGAGATCGTCCGAGTCATCATCATTGCCGATTGAAGGTTCGTTTCGATT
JMFF048A11+           AAAAGAACAACAGAGATCGTCCGAGTCATCATCATTGCCGATTGAAGGTTCGTTTCGATT
JMSF011K02+           AAAAGAACAACAGAGATCGTCCGAGTCATCATCATTGCCGATTGAAGGTTCGTTTCGATT
                      ____________________________________________________________
consensus             AAAAGAACAACAGAGATCGTCCGAGTCATCATCATTGCCGATTGAAGGTTCGTTTCGATT
 
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rJMSF011K02-          TC                                                          
JMFF048A11+           TCAACCGTTTCTCTTTGTTCCTAGTTTCAGGAATTGAACAGAAAATCGCCGG        
JMSF011K02+           TCAACCGTTTCTCTTTGTTCCTAGTTTCAGGAATTGAACAGAAAATCGCCGGAGAGTGGG
                      ____________________________________________________________
consensus             TCAACCGTTTCTCTTTGTTCCTAGTTTCAGGAATTGAACAGAAAATCGCCGGAGAGTGGG
 
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JMSF011K02+           GACGGGAGAGAGCAGTCTTAAAAGGGGGGAAAAAGGCGAAAGAGACCAGGGGAAGCCGCC
                      ____________________________________________________________
consensus             GACGGGAGAGAGCAGTCTTAAAAGGGGGGAAAAAGGCGAAAGAGACCAGGGGAAGCCGCC