Contig 010615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I18Sequence549010615 (2)ref|XP_006340028.1|4e-97PREDICTED: calcium-dependent protein kinase SK5-like [Solanum tuberosum]745011347 (3)ref|XP_002518007.1|3e-61calcium-dependent protein kinase, putative [Ricinus communis] gb|EEF44525.1| cal
JMSF011F22Sequence393010615 (2)ref|XP_006340028.1|4e-22PREDICTED: calcium-dependent protein kinase SK5-like [Solanum tuberosum]264011347 (3)emb|CDP19676.1|7e-15unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF009I18+                                     AAGGAACAAAAAGTTCTCGGGCTTGAGATCTCTA
                      ____________________________________________________________
consensus                                       AAGGAACAAAAAGTTCTCGGGCTTGAGATCTCTA
 
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JMFF009I18+           TGCATGACACCCAGGGAATGGCAAGCCTCCACGACCCCAACAATGGTCTTGAGCAGCTTA
                      ____________________________________________________________
consensus             TGCATGACACCCAGGGAATGGCAAGCCTCCACGACCCCAACAATGGTCTTGAGCAGCTTA
 
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JMFF009I18+           GCAGCCTCCCTTTCACTGTAATGCCCCTTCTCCACAATCCTATCAAAGAGCTCCCCACCA
                      ____________________________________________________________
consensus             GCAGCCTCCCTTTCACTGTAATGCCCCTTCTCCACAATCCTATCAAAGAGCTCCCCACCA
 
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JMFF009I18+           GCGCAGAGCTCCATGACTATATGCACATACAGGGCATCCTCAAAAGTACCCTTTATCCTC
                      ____________________________________________________________
consensus             GCGCAGAGCTCCATGACTATATGCACATACAGGGCATCCTCAAAAGTACCCTTTATCCTC
 
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JMFF009I18+           ACAACATTCGGGTGCTCAGACAAGTGGTGCATTATCTGAATCTCCCGCCACACATCCTCG
                      ____________________________________________________________
consensus             ACAACATTCGGGTGCTCAGACAAGTGGTGCATTATCTGAATCTCCCGCCACACATCCTCG
 
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JMFF009I18+           TAGTCCTCCTTGCAGATCAGCTTCTTCTTGGGAATGGTCTTGCAAGCATAGAGCGTGGCC
JMSF011F22+                                      TTGGGAATGGTCNTGCAAGCATAGAGCGTGGCC
                      ____________________________________________________________
consensus             TAGTCCTCCTTGCAGATCAGCTTCTTCTTGGGAATGGTCTTGCAAGCATAGAGCGTGGCC
 
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JMFF009I18+           GTGGCCTTCTCCGTGCAGAGATGGGTGGTCCCAAACTGGCCTTGACCCAGCTTCTTGCCT
JMSF011F22+           GTGGCCTTCTCCGTGCAGAGATGGGTGGTCCCAAACTGGCCTTGACCCAGCTTCTTGCCT
                      ____________________________________________________________
consensus             GTGGCCTTCTCCGTGCAGAGATGGGTGGTCCCAAACTGGCCTTGACCCAGCTTCTTGCCT
 
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JMFF009I18+           ATGGTGTAGAGGTGCCGAAGGGGCTGGGTCCTGTAAGGGAGGACCCATGTGGGCTTTGGC
JMSF011F22+           ATGGTGTAGAGGTGCCGAAGGGGCTGGGTCCTGTAAGGGAGGACCCATGTGGGCTTTGGC
                      ____________________________________________________________
consensus             ATGGTGTAGAGGTGCCGAAGGGGCTGGGTCCTGTAAGGGAGGACCCATGTGGGCTTTGGC
 
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JMFF009I18+           CTTGGAGGGTCTGTTGTTGATGTTTCTGAGGTTGAGGACGCCATGGACGAGTGAATGAAT
JMSF011F22+           CTTGGAGGGTCTGTTGTTGATGTTTCTGAGGTTGAGGACGCCATGGACGAGTGAATGAAT
                      ____________________________________________________________
consensus             CTTGGAGGGTCTGTTGTTGATGTTTCTGAGGTTGAGGACGCCATGGACGAGTGAATGAAT
 
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JMFF009I18+           CCTGAATTCGTGACTCAATAAGCAGTGAATTCAAT                         
JMSF011F22+           CCTGAATTCGTGACTCAATAAGCAGTGAATTCAATGGATTTGAGATTAAAATTTGGGGGT
                      ____________________________________________________________
consensus             CCTGAATTCGTGACTCAATAAGCAGTGAATTCAATGGATTTGAGATTAAAATTTGGGGGT
 
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JMSF011F22+           ATTAAATTGAAGAATAGACTTGGAGAAAAGTTGTCAGTAACCAAGACTTCTGTTTCCTCT
                      ____________________________________________________________
consensus             ATTAAATTGAAGAATAGACTTGGAGAAAAGTTGTCAGTAACCAAGACTTCTGTTTCCTCT
 
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JMSF011F22+           CACTTTCTCTCTCCGTTTCTTGCACGAGAGTTTCTCTTTCTATATTCGCTCCAATTCCGC
                      ____________________________________________________________
consensus             CACTTTCTCTCTCCGTTTCTTGCACGAGAGTTTCTCTTTCTATATTCGCTCCAATTCCGC