Contig 010605:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010J13Sequence449010605 (3)760008460 (3)ref|XP_011095886.1|1e-53PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Sesamum
JMSF013N21Sequence493010605 (3)751008460 (3)ref|XP_011095886.1|9e-56PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Sesamum
JMSF023P08Sequence652010605 (3)757008460 (3)ref|XP_011095886.1|9e-49PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Sesamum

Alignment

This contig is upended


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JMSF023P08+                           ATTGGAGGTATATTTCGAGCTTCGATTACTCGTACCAAAAGTTT
                      ____________________________________________________________
consensus                             ATTGGAGGTATATTTCGAGCTTCGATTACTCGTACCAAAAGTTT
 
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JMSF023P08+           CATTTTTACCCCAACAAAATCACACAACACATGCGCCCAGCTTCAAGATCGGACCTTTTA
                      ____________________________________________________________
consensus             CATTTTTACCCCAACAAAATCACACAACACATGCGCCCAGCTTCAAGATCGGACCTTTTA
 
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JMSF013N21+                      AACAACGCTGTGATCAACAACTCTAAAAATGGATAGGACCAAAGATGAA
JMSF023P08+           TGGGGAAAACCAACAACGCTGTGATCAACAACTCTAAAAATGGATAGGACCAAAGATGAA
                      ____________________________________________________________
consensus             TGGGGAAAACCAACAACGCTGTGATCAACAACTCTAAAAATGGATAGGACCAAAGATGAA
 
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JMSF013N21+           AATAATGGGTTTCTTAACAAGAATCCAACCAGAATGCAATTAGGAAACTATATTAAAATC
JMSF023P08+           AATAATGGGTTTCTTAACAAGAATCCAACCAGAATGCAATTAGGAAACTATATTAAAATC
                      ____________________________________________________________
consensus             AATAATGGGTTTCTTAACAAGAATCCAACCAGAATGCAATTAGGAAACTATATTAAAATC
 
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JMSF013N21+           AATAAGTTGACTTTCAAGGGGTTTGACTTCTAAAACTCGAAATCTAACATAAATGAACAT
JMSF023P08+           AATAAGTTGACTTTCAAGGGGTTTGACTTCTAAAACTCGAAATCTAACATAAATGAACAT
JMSF010J13+                                          AAAACTCGAAATCTAACATAAATGACCAT
                      ____________________________________________________________
consensus             AATAAGTTGACTTTCAAGGGGTTTGACTTCTAAAACTCGAAATCTAACATAAATGAACAT
 
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JMSF013N21+           TCAAGTAAGGATATATCCAAAGTTTAGATTTTGGAGCCAATGAAAGGTATGAAACCCCTT
JMSF023P08+           TCAAGTAAGGATATATCCAAAGTTTAGATTTTGGAGCCAATGAAAGGTATGAAACCCCTT
JMSF010J13+           TCAAGTAAGGATATATCCAAAGTTTAGATTTTGGAGCCAATGAAAGGTATGAAACCCCTT
                      ____________________________________________________________
consensus             TCAAGTAAGGATATATCCAAAGTTTAGATTTTGGAGCCAATGAAAGGTATGAAACCCCTT
 
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JMSF013N21+           GTATGTAGATTATAAAAATGGGGAAAGAAAGTTATCAAAACCTGAAGGAACCCAAATTGA
JMSF023P08+           GTATGTAGATTATAAAAATGGGGAAAGAAAGTTATCAAAACCTGAAGGAACCCAAATTGA
JMSF010J13+           GTATGTAGATTATAAAAATGGGGAAAGAAAGTTATCAAAACCTGAAGGAACCCAAATTGA
                      ____________________________________________________________
consensus             GTATGTAGATTATAAAAATGGGGAAAGAAAGTTATCAAAACCTGAAGGAACCCAAATTGA
 
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JMSF013N21+           ATGGAAGTTGAAGATTATAACCAAGATAAGAACTTGGATCAAATTTTGAAATGTCAAAAC
JMSF023P08+           ATGGAAGTTGAAGATTATAACCAAGATAAGAACTTGGATCAAATTTTGAAATGTCAAAAC
JMSF010J13+           ATGGAAGTTGAAGATTATAGCCAAGATAAGAACTTGGATCAAATTTTGAAATGTCAAAAC
                      ____________________________________________________________
consensus             ATGGAAGTTGAAGATTATAACCAAGATAAGAACTTGGATCAAATTTTGAAATGTCAAAAC
 
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JMSF013N21+           CCCAGAAATTCAAGTTTCTAATGGGTTCTTGACTGAGAATCAGATAATCTAGGAGAAGAA
JMSF023P08+           CCCAGAAATTCAAGTTTCTAATGGGTTCTTGACTGAGAATCAGATAATCTAGGAGAAGAA
JMSF010J13+           CCCAGAAATTCAAGTTTCTAATGGGTTCTTGACTGAGAATCAGATAATCTAGGAGAAGAA
                      ____________________________________________________________
consensus             CCCAGAAATTCAAGTTTCTAATGGGTTCTTGACTGAGAATCAGATAATCTAGGAGAAGAA
 
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JMSF013N21+           CGACTGAAAGAGGCAAGAGGTAATGGAGGACAAGCGAAGAAGAGGAAAAACTAATT-AAA
JMSF023P08+           CGACTGAAAGAGGCAAGAGGTAATGGAGGACAAGCGAAGAAGAGGAAAAACTAATTAAAA
JMSF010J13+           CGACTGAAAGAGGCAAGAGGTAATGGAGGACAAGCGAAGAAGAGGAAAAACTAATTAAAA
                      ____________________________________________________________
consensus             CGACTGAAAGAGGCAAGAGGTAATGGAGGACAAGCGAAGAAGAGGAAAAACTAATTAAAA
 
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JMSF013N21+           ATATAAATTAGCTTAGAAAGTGC                                     
JMSF023P08+           ATATAAATTAGCTTAGAAAGTGCACGGACTTTTCTAAAAAATGCCGGTTTTGAAATGGAG
JMSF010J13+           ATATAAATTAGCTTAGAAAGTGCACGGACTTTTCTAAAAAATGCCGGTTTTGAAATGGAG
                      ____________________________________________________________
consensus             ATATAAATTAGCTTAGAAAGTGCACGGACTTTTCTAAAAAATGCCGGTTTTGAAATGGAG
 
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JMSF023P08+           TGCGCG                                                      
JMSF010J13+           TGCGCGTATCTTCTTGGACCTGTTAACGACGAAATAATACGATTTGACCTCGTCACGCCC
                      ____________________________________________________________
consensus             TGCGCGTATCTTCTTGGACCTGTTAACGACGAAATAATACGATTTGACCTCGTCACGCCC