Contig 010597:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049P24Sequence627018490ref|XP_010314492.1|83.2PREDICTED: uncharacterized protein LOC101265212 [Solanum lycopersicum] ref|XP_01581010597 (9)ref|XP_009608587.1|50.1PREDICTED: uncharacterized protein LOC104102560 [Nicotiana tomentosiformis] ref|
JMFN006L22Sequence606010597 (9)ref|XP_009798705.1|294PREDICTED: uncharacterized protein LOC104244885 [Nicotiana sylvestris] ref|XP_00
JMSF009L08Sequence343010597 (9)ref|XP_006573785.1|140PREDICTED: uncharacterized protein LOC100798959 [Glycine max] gb|KHN25689.1| hyp766010597 (9)ref|XP_009608587.1|346PREDICTED: uncharacterized protein LOC104102560 [Nicotiana tomentosiformis] ref|
JMSF048F03Sequence644010597 (9)ref|XP_002303601.2|1e-116hypothetical protein POPTR_0003s13070g [Populus trichocarpa] gb|ABK94210.1| unkn766010597 (9)ref|XP_010314492.1|306PREDICTED: uncharacterized protein LOC101265212 [Solanum lycopersicum] ref|XP_01
JMSF048I08Sequence694010597 (9)ref|XP_010314492.1|378PREDICTED: uncharacterized protein LOC101265212 [Solanum lycopersicum] ref|XP_01750010597 (9)ref|XP_010314492.1|295PREDICTED: uncharacterized protein LOC101265212 [Solanum lycopersicum] ref|XP_01
JMSF049P04Sequence693010597 (9)ref|XP_010314492.1|366PREDICTED: uncharacterized protein LOC101265212 [Solanum lycopersicum] ref|XP_01

Alignment

This contig is upended


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rJMFF049P24-                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMFF049P24-          TAATCACACATTAATTAATTGTATATATCCAGAACAAATTACAAAACCCACATAAACATG
rJMSF048I08-                                              AATTACAAAACCCACATAAACATG
rJMSF048F03-                                              AATTACAAAACCCACATAAACATG
                      ____________________________________________________________
consensus             TAATCACACATTAATTAATTGTATATATCCAGAACAAATTACAAAACCCACATAAACATG
 
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rJMFF049P24-          TTCGGAGATATGAATCTACACAAAAACTCACCACACATTGTTCAATACATTTTAATGCTC
rJMSF048I08-          TTCGGAGATATGAATCTACACAAAAACTCACCACACATTGTTCAATACATTTTAATGCTC
rJMSF048F03-          TTCGGAGATATGAATCTACACAAAAACTCACCACACATTGTTCAATACATTTTAATGCTC
                      ____________________________________________________________
consensus             TTCGGAGATATGAATCTACACAAAAACTCACCACACATTGTTCAATACATTTTAATGCTC
 
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rJMFF049P24-          CAAGATTGTAATCTAGATGACTTACAACTGTCTGATGACAAGATAATGAAGGTATATTTC
rJMSF048I08-          CAAGATTGTAATCTAGATGACTTACAACTGTCTGATGACAAGATAATGAAGGTATATTTC
rJMSF048F03-          CAAGATTGTAATCTAGATGACTTACAACTGTCTGATGACAAGATAATGAAGGTATATTTC
rJMSF009L08-            AGATTGTAATCTAGATGACTTACAACTGTCTGATGACAAGATAATGAAGGTATATTTC
                      ____________________________________________________________
consensus             CAAGATTGTAATCTAGATGACTTACAACTGTCTGATGACAAGATAATGAAGGTATATTTC
 
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rJMFF049P24-          CAACCCAGATTGGCCAAAATGATTACTTTGGATAGCCAGCTGGGGGATAACCAGCAGGAG
rJMSF048I08-          CAACCCAGATTGGCCAAAATGATTACTTTGGATAGCCAGCTGGGGGATAACCAGCAGGAG
rJMSF048F03-          CAACCCAGATTGGCCAAAATGATTACTTTGGATAGCCAGCTGGGGGATAACCAGCAGGAG
JMFN006L22+                                             GCCAGCTGGGGGATAACCAGCAGGAG
rJMSF009L08-          CAACCCAGATTGGCCAAAATGATTACTTTGGATAGCCAGCTGGGGGATAACCAGCAGGAG
                      ____________________________________________________________
consensus             CAACCCAGATTGGCCAAAATGATTACTTTGGATAGCCAGCTGGGGGATAACCAGCAGGAG
 
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rJMFF049P24-          GATAGCCAGCTGGTGGATAGCCAGAAGCTGGATAACCCTGAGCTTGAGGTGGTGGTTGAG
rJMSF048I08-          GATAGCCAGCTGGTGGATAGCCAGAAGCTGGATAACCCTGAGCTTGAGGTGGTGGTTGAG
rJMSF048F03-          GATAGCCAGCTGGTGGATAGCCAGAAGCTGGATAACCCTGAGCTTGAGGTGGTGGTTGAG
JMFN006L22+           GATAGCCAGCTGGTGGATAGCCAGAAGCTGGATAACCCTGAGCTTGAGGTGGTGGTTGAG
rJMSF009L08-          GATAGCCAGCTGGTGGATAGCCAGAAGCTGGATAACCCTGAGCTTGAGGTGGTGGTTGAG
                      ____________________________________________________________
consensus             GATAGCCAGCTGGTGGATAGCCAGAAGCTGGATAACCCTGAGCTTGAGGTGGTGGTTGAG
 
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rJMFF049P24-          CATAAGGCTGACCATATGCTGGCGCAGGATATCCAACGTTGGGTGGGTACGGCTGATCAA
rJMSF048I08-          CATAAGGCTGACCATATGCTGGCGCAGGATATCCAACGTTGGGTGGGTACGGCTGATCAA
rJMSF048F03-          CATAAGGCTGACCATATGCTGGCGCAGGATATCCAACGTTGGGTGGGTACGGCTGATCAA
JMFN006L22+           CATAAGGCTGACCATATGCTGGCGCAGGATATCCAACGTTGGGTGGGTACGGCTGATCAA
rJMSF009L08-          -ATAAGGCTGACCATATGCTGGCGCAGGATATCCAACGTTGGGTGGGTACGGCTGATCAA
JMSF049P04+                                                       GGGTACGGCTGATCAA
                      ____________________________________________________________
consensus             CATAAGGCTGACCATATGCTGGCGCAGGATATCCAACGTTGGGTGGGTACGGCTGATCAA
 
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rJMFF049P24-          GCCGTGACATTTGCTGAACTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
rJMSF048I08-          GCCGTGACATTAGCTGAACTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
rJMSF048F03-          GCCGTGACATTAGCTGAACTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
JMFN006L22+           GCCGTGACATTTGCTGAACTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
rJMSF009L08-          GCCGTGACATTTGCTGAACTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
JMSF049P04+           GCCGTGACATTTGCTGAACTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
JMSF048I08+                             CTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
                      ____________________________________________________________
consensus             GCCGTGACATTTGCTGAACTGGAGGAACTGACATCGGTTGAGGACCAAATTTCCCGTCTC
 
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rJMFF049P24-          TCTTGTCCATCTCAACCTTGTGTTGCGTCT                              
rJMSF048I08-          TCTTGTCCATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
rJMSF048F03-          TCTTGTCCATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
JMFN006L22+           TCTTGTCCATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
rJMSF009L08-          TCTTGTCCATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
JMSF049P04+           TCTTGTCCATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
JMSF048F03+                   ATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
JMSF048I08+           TCTTGTCCATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
                      ____________________________________________________________
consensus             TCTTGTCCATCTCAACCTTGTGTTGCGTCTGCATACAGGCACAAACCGTGCAGTAGACCA
 
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rJMSF048I08-          TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
rJMSF048F03-          TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
JMFN006L22+           TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
rJMSF009L08-          TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
JMSF049P04+           TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
JMSF048F03+           TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
JMSF048I08+           TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
                      ____________________________________________________________
consensus             TATCAGACAAGCAAGATAGTAACTGGGACGCCTCCTGGATCTCCTCACTTCCAACAATCA
 
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rJMSF048I08-          TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
rJMSF048F03-          TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
JMFN006L22+           TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
rJMSF009L08-          TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
JMSF049P04+           TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
JMSF048F03+           TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
JMSF048I08+           TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
                      ____________________________________________________________
consensus             TTGCAATTATGGAGAATATGCAAGCAAGTTGTTGGAGACAGAACATGAAACCAATAATGC
 
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rJMSF048I08-          AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
rJMSF048F03-          AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
JMFN006L22+           AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
rJMSF009L08-          AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
JMSF049P04+           AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
JMSF048F03+           AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
JMSF048I08+           AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
                      ____________________________________________________________
consensus             AGTTATCACATCGTGTTGTTTGTATGTTGAACTCATCTTGCAACAAGAAGCGAGTTGAAG
 
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rJMSF048I08-          CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
rJMSF048F03-          CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
JMFN006L22+           CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
rJMSF009L08-          CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
JMSF049P04+           CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
JMSF048F03+           CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
JMSF048I08+           CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
                      ____________________________________________________________
consensus             CCACTGAATTTCCAAAGCAAAGAAAAACCTCAGTCGCAAGGCACACTTCGGGGCATTTAC
 
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rJMSF048I08-          TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
rJMSF048F03-          TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
JMFN006L22+           TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
rJMSF009L08-          TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
JMSF049P04+           TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
JMSF048F03+           TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
JMSF048I08+           TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
JMSF009L08+                            CTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
                      ____________________________________________________________
consensus             TTTCTCCACATCGACCACTGCAGGGCATATAACCAGCACAGCATGTATACCTTGACATAT
 
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rJMSF048I08-          C                                                           
rJMSF048F03-          CATTGTAAAGAGCTCGTTTT                                        
JMFN006L22+           CATTGTAAAGAGCTCGTTTTCGAAGCAAATATGATACACA                    
rJMSF009L08-          CATTGTAAAGAGCTCGTTTTCGAAGCAAATATGATACACACGGTCCACACCACAACGCAA
JMSF049P04+           CATTGTAAAGAGCTCGTTTTCGAAGCAAATATGATACACACGGTCCACACCACAACGCAA
JMSF048F03+           CATTGTAAAGAGCTCGTTTTCGAAGCAAATATGATACACACGGTCCACACCACAACGCAA
JMSF048I08+           CATTGTAAAGAGCTCGTTTTCGAAGCAAATATGATACACACGGTCCACACCACAACGCAA
JMSF009L08+           CATTGTAAAGAGCTCGTTTTCGAAGCAAATATGATACACACGGTCCACACCACAACGCAA
                      ____________________________________________________________
consensus             CATTGTAAAGAGCTCGTTTTCGAAGCAAATATGATACACACGGTCCACACCACAACGCAA
 
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rJMSF009L08-          AACAGCAATAAGGAGTATCAGCTTGGATGGTGCTCATGAGATC                 
JMSF049P04+           AACAGCAATAAGGAGTATCAGCTTGGATGGTGCTCATGAGATCAGTGTGCTATAGATTGC
JMSF048F03+           AACAGCAATAAGGAGTATCAGCTTGGATGGTGCTCATGAGATCAGTGTGCCATAGATTGC
JMSF048I08+           AACAGCAATAAGGAGTATCAGCTTGGATGGTGCTCATGAGATCAGTGTGCCATAGATTGC
JMSF009L08+           AACAGCAATAAGGAGTATCAGCTTGGATGGTGCTCATGAGATCAGTGTGCCATAGATTGC
                      ____________________________________________________________
consensus             AACAGCAATAAGGAGTATCAGCTTGGATGGTGCTCATGAGATCAGTGTGCCATAGATTGC
 
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JMSF049P04+           GATAGTTCTGACGGAGCTGCATCTTGTCCATGTGATCTTGCGACGCCATTTTTCACGACG
JMSF048F03+           GATAGTTCTGACGGAGCTGCATCTTGTCCATGTGATCTTGCGACGCCATTTTTCACGACG
JMSF048I08+           GATAGTTCTGACGGAGCTGCATCTTGTCCATGTGATCTTGCGACGCCATTTTTCACGACG
JMSF009L08+           GATAGTTCTGACGGAGCTGCATCTTGTCCATGTGATCTTGCGACGCCATTTTTCACGACG
                      ____________________________________________________________
consensus             GATAGTTCTGACGGAGCTGCATCTTGTCCATGTGATCTTGCGACGCCATTTTTCACGACG
 
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JMSF049P04+           GTTGCTCTGGAACAGATTCGGAAACCAAACCCCCCCAGATCACTTACTCCTTCTCAATTG
JMSF048F03+           GTTGCTCTGGAACAGATTCGGAAACCAAACCCCCCCAGATCACTTACTCCTTCTCAATTG
JMSF048I08+           GTTGCTCTGGAACAGATTCGGAAACCAAACCCCCCCAGATCACTTACTCCTTCTCAATTG
JMSF009L08+           GTTGCTCTGGAACAGATTCGGAAACCAAACCCCCCCAGATCACTTACTCCTTCTCAATTG
                      ____________________________________________________________
consensus             GTTGCTCTGGAACAGATTCGGAAACCAAACCCCCCCAGATCACTTACTCCTTCTCAATTG
 
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JMSF049P04+           CTATATCTTCTCCT                                              
JMSF048F03+           CTATATCTTCTCCTTCAGATGAGCCAGCAAAGACGAAAGCTTTTCCAAAGC         
JMSF048I08+           CTATATCTTCTCCTTCAGATGAGCCAGCAAAGACGAAAGCTTTTCCAAAGC         
JMSF009L08+           CTATATCTTCTCCTTCAGATGAGCCAGCAAAGACGAAAGCTTTTCCAAAGCGAAGACACC
                      ____________________________________________________________
consensus             CTATATCTTCTCCTTCAGATGAGCCAGCAAAGACGAAAGCTTTTCCAAAGCGAAGACACC