| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS031C11 | Sequence | 592 | 010594 (4) | ref|XP_009767906.1| | 2e-92 | PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal isoform X1 [Nicotiana | |||||
| JMSF009C22 | Sequence | 319 | 010594 (4) | ref|XP_009597891.1| | 6e-15 | PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment | 778 | 013741 (4) | ref|XP_009589417.1| | 2e-147 | PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment |
| JMSF019D09 | Sequence | 225 | 010594 (4) | ref|XP_009597891.1| | 9e-10 | PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment | 806 | 013741 (4) | gb|KJB12548.1| | 6e-107 | hypothetical protein B456_002G023900 [Gossypium raimondii] |
| JMSF039A24 | Sequence | 644 | 010594 (4) | ref|XP_009767906.1| | 4e-102 | PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal isoform X1 [Nicotiana | |||||
This contig is upended
. : . : . : . : . : . :
JMFS031C11+ AGTGTCATATAAAG
JMSF039A24+ ATATTGGCATGGTTGGCAATATACTTAACAGCATCAGGACCAAGAGTGTCATATAAAG
____________________________________________________________
consensus ATATTGGCATGGTTGGCAATATACTTAACAGCATCAGGACCAAGAGTGTCATATAAAG
. : . : . : . : . : . :
JMFS031C11+ GGACAGAGATAAATGAATATGCTGAGCAGGCATGGTCTACAATGAGCCATTCGGGCATAT
JMSF039A24+ GGACAGAGATAAATGAATATGCTGAGCAGGCATGGTCTACAATGAGCCATTCGGGCATAT
____________________________________________________________
consensus GGACAGAGATAAATGAATATGCTGAGCAGGCATGGTCTACAATGAGCCATTCGGGCATAT
. : . : . : . : . : . :
JMFS031C11+ TTATGAAATAAATCCCCACGCGAGCTCCTGGTTCTAGTCCACAAAAACGAAGCCCAGAAC
JMSF039A24+ TTATGAAATAAATCCCCACGCGAGCTCCTGGTTCTAGTCCACAAAAACGAAGCCCAGAAC
____________________________________________________________
consensus TTATGAAATAAATCCCCACGCGAGCTCCTGGTTCTAGTCCACAAAAACGAAGCCCAGAAC
. : . : . : . : . : . :
JMFS031C11+ CTATTGCTGACCGAGCTGTTCCAGCCTCTCCATATGTCATCCATTTGTATTCTCCAATGG
JMSF039A24+ CTATTGCTGACCGAGCTGTTCCAGCCTCTCCATATGTCATCCATTTGTATTCTCCAATGG
____________________________________________________________
consensus CTATTGCTGACCGAGCTGTTCCAGCCTCTCCATATGTCATCCATTTGTATTCTCCAATGG
. : . : . : . : . : . :
JMFS031C11+ TTCCATCTACCCGTATACGTGTGCCCAAATATTTGTAATCTTGAAAGGTTTCAACTGCAT
JMSF039A24+ TTCCATCTACCCGTATACGTGTGCCCAAATATTTGTAATCTTGAAAGGTTTCAACTGCAT
____________________________________________________________
consensus TTCCATCTACCCGTATACGTGTGCCCAAATATTTGTAATCTTGAAAGGTTTCAACTGCAT
. : . : . : . : . : . :
JMFS031C11+ GCACAAAGTTGTCATGCAGTGTACCAATATCAGGATGATCAGGGAATCTAGTTACAAGCT
JMSF039A24+ GCACAAAGTTGTCATGCAGTGTACCAATATCAGGATGATCAGGGAATCTAGTTACAAGCT
____________________________________________________________
consensus GCACAAAGTTGTCATGCAGTGTACCAATATCAGGATGATCAGGGAATCTAGTTACAAGCT
. : . : . : . : . : . :
JMFS031C11+ TCAAAGGAGAGATCGCAGATCTGTATACATCCCACTTTCCAGTCTGCAATTTTTCAGGAA
JMSF039A24+ TCAAAGGAGAGATCGCAGATCTGTATACATCCCACTTTCCAGTCTGCAATTTTTCAGGAA
JMSF009C22+ GTCTGCAATTTTTCAGGAA
____________________________________________________________
consensus TCAAAGGAGAGATCGCAGATCTGTATACATCCCACTTTCCAGTCTGCAATTTTTCAGGAA
. : . : . : . : . : . :
JMFS031C11+ GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
JMSF039A24+ GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
JMSF019D09+ ACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
JMSF009C22+ GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
____________________________________________________________
consensus GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
. : . : . : . : . : . :
JMFS031C11+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
JMSF039A24+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
JMSF019D09+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
JMSF009C22+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
____________________________________________________________
consensus ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
. : . : . : . : . : . :
JMFS031C11+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
JMSF039A24+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
JMSF019D09+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGGAAAGATAAATC
JMSF009C22+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
____________________________________________________________
consensus GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
. : . : . : . : . : . :
JMFS031C11+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTT
JMSF039A24+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATAC
JMSF019D09+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATAC
JMSF009C22+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATACAGACAAGAAAAGAGG
____________________________________________________________
consensus GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATACAGACAAGAAAAGAGG
. : . : . : . : . : . :
JMSF009C22+ CAATGAATATAGATATATATATTTAAAGAAAATGCGTGATGTATTAGTTTCCAATGCCCC
____________________________________________________________
consensus CAATGAATATAGATATATATATTTAAAGAAAATGCGTGATGTATTAGTTTCCAATGCCCC