Contig 010587:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009H07Sequence625010587 (5)ref|XP_009759013.1|2e-116PREDICTED: signal peptidase complex catalytic subunit SEC11A-like [Nicotiana sy
JMFN029K13Sequence619010587 (5)emb|CDP10395.1|2e-106unnamed protein product [Coffea canephora]
JMFN039P06Sequence578010587 (5)ref|XP_009759013.1|2e-108PREDICTED: signal peptidase complex catalytic subunit SEC11A-like [Nicotiana sy
JMSF008E13Sequence490010587 (5)ref|XP_009759013.1|3e-84PREDICTED: signal peptidase complex catalytic subunit SEC11A-like [Nicotiana sy767010587 (5)emb|CDP10395.1|8e-93unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF008E13-                 GCAAGTGGACTTTCTTCATCTGAACTTAGAATTATGTCTTAATAAAGGGAAAT
                      ____________________________________________________________
consensus                    GCAAGTGGACTTTCTTCATCTGAACTTAGAATTATGTCTTAATAAAGGGAAAT
 
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rJMSF008E13-          TATAGAATAAGTAGTACATTTTTAAAATTTAACTATAATTTCCTGGGGCAAGCATTGGGC
                      ____________________________________________________________
consensus             TATAGAATAAGTAGTACATTTTTAAAATTTAACTATAATTTCCTGGGGCAAGCATTGGGC
 
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rJMSF008E13-          AGCAAGGTACACATGTTCATACAAGTGAGAAGTGAACGGAAGCTAGAAACAGCTGAGTTA
                      ____________________________________________________________
consensus             AGCAAGGTACACATGTTCATACAAGTGAGAAGTGAACGGAAGCTAGAAACAGCTGAGTTA
 
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rJMSF008E13-          GGTCCTATGTGGTTCCTTTTTGTAGTTCTGATCCTCCATATTTGCCCTAGTCTTTTGATG
JMFN009H07+                       TTCCTTTTTGTAGTTCTGATCCTCCATATTTGCCCTAGTCTTTTGATG
                      ____________________________________________________________
consensus             GGTCCTATGTGGTTCCTTTTTGTAGTTCTGATCCTCCATATTTGCCCTAGTCTTTTGATG
 
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rJMSF008E13-          TGATGACCAATAACCCCAGAGCGCCTATCAAAATATACTTGATAATAGGCTTCTCAGTCA
JMFN009H07+           TGATGACCAATAACCCCAGAGCGCCTATCAAAATATACTTGATAATAGGCTTCTCAGTCA
JMFN039P06+            GATGACCAATAACCCCAGAGCGCCTATCAAAATATACTTGATAATAGGCTTCTCAGTCA
JMFN029K13+            GATGACCAATAACCCCAGAGCGCCTATCAAAATATACTTGATAATAGGCTTCTCAGTCA
                      ____________________________________________________________
consensus             TGATGACCAATAACCCCAGAGCGCCTATCAAAATATACTTGATAATAGGCTTCTCAGTCA
 
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rJMSF008E13-          TAATTATTGTCACCCAACCCA-ATACGGCAAAAATCCTACAGCTCTCCCCATGATGTGCT
JMFN009H07+           TAATTATTGTCACCCAACCCACATACGGCAAAAATCCTACAGCTCTCCCCATGATGTGCT
JMFN039P06+           TAATTATTGTCACCCAACCCACATACGGCAAAAATCCTACAGCTCTCCCCATGATGTGCT
JMFN029K13+           TAATTATTGTCACCCAACCCACATACGGCAAAAATCCTACAGCTCTCCCCATGATGTGCT
JMSF008E13+                                                             ATGATGTGCN
                      ____________________________________________________________
consensus             TAATTATTGTCACCCAACCCACATACGGCAAAAATCCTACAGCTCTCCCCATGATGTGCT
 
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rJMSF008E13-          GACGCTGTAACCAGAGCTGACCGTGGGCATATAGAGCTCTATCATCCCCAAAATTATTGT
JMFN009H07+           GACGCTGTAACCAGAGCTGACCGTGGGCATATAGAGCTCTATCATCCCCAAAATTATTGT
JMFN039P06+           GACGCTGTAACCAGAGCTGACCGTGGGCATATAGAGCTCTATCATCCCCAAAATTATTGT
JMFN029K13+           GACGCTGTAACCAGAGCTGACCGTGGGCATATAGAGCTCTATCATCCCCAAAATTATTGT
JMSF008E13+           GACGCTGTAACCAGAGCTGACCGTGGGCATATAGAGCTCTATCATCCCCAAAATTATNGT
                      ____________________________________________________________
consensus             GACGCTGTAACCAGAGCTGACCGTGGGCATATAGAGCTCTATCATCCCCAAAATTATTGT
 
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rJMSF008E13-          CTCCTTTTGTTAGTATTTCAACTTCACCAGTATCTTGGCGCTCATGGACCTTTATCACTC
JMFN009H07+           CTCCTTTTGTTAGTATTTCAACTTCACCAGTATCTTGGCGCTCATGGACCTTTATCACTC
JMFN039P06+           CTCCTTTTGTTAGTATTTCAACTTCACCAGTATCTTGGCGCTCATGGACCTTTATCACTC
JMFN029K13+           CTCCTTTTGTTAGTATTTCAACTTCACCAGTATCTTGGCGCTCATGGACCTTTATCACTC
JMSF008E13+           CTCCTTTTGTTAGTATTTCAACTTCACCAGTATCTTGGCGCTCATGGACCTTTATCACTC
                      ____________________________________________________________
consensus             CTCCTTTTGTTAGTATTTCAACTTCACCAGTATCTTGGCGCTCATGGACCTTTATCACTC
 
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rJMSF008E13-          TGTGGACTATTGGAATTTCGCGGCCATCAATATTAAACACAACTATTTCTCCTGTGCGAA
JMFN009H07+           TGTGGACTATTGGAATTTCGCGGCCATCAATATTAAACACAACTATTTCTCCTGTGCGAA
JMFN039P06+           TGTGGACTATTGGAATTTCGCGGCCATCAATATTAAACAAAACTATTTCTCCTGTGCGAA
JMFN029K13+           TGTGGACTATTGGAATTTCGCGGCCATCAATATTAAACACAACTATTTCTCCTGTGCGAA
JMSF008E13+           TGTGGACTATTGGAATTTCGCGGCCATCAATATTAAACACAACTATTTCTCCTGTGCGAA
                      ____________________________________________________________
consensus             TGTGGACTATTGGAATTTCGCGGCCATCAATATTAAACACAACTATTTCTCCTGTGCGAA
 
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rJMSF008E13-          TAGGATCTTCAGTCATACGCAAGAACAATATGTCACCCCTTTTGAAGCCAGGTTCCATAC
JMFN009H07+           TAGGATCTTCAGTCATACGCAAGAACAATATGTCACCCCTTTTGAAGCCAGGTTCCATAC
JMFN039P06+           TAGGATCTTCAGTCATACGCAAGAACAATATGTCACCCCTTTTGAAGCCAGGTTCCATAC
JMFN029K13+           TAGGATCTTCAGTCATACGCAAGAACAATATGTCACCCCTTTTGAAGCCAGGTTCCATAC
JMSF008E13+           TAGGATCTTCAGTCATACGCAAGAACAATATGTCACCCCTTTTGAAGCCAGGTTCCATAC
                      ____________________________________________________________
consensus             TAGGATCTTCAGTCATACGCAAGAACAATATGTCACCCCTTTTGAAGCCAGGTTCCATAC
 
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rJMSF008E13-          TTCCAGAAAGAACAACCACCACAGGCGATTCACTTCCAGTTATACACATTAACCCTTTCC
JMFN009H07+           TTCCAGAAAGAACAACCACCACAGGCGATTCACTTCCAGTTATACACATTAACCCTTTCC
JMFN039P06+           TTCCAGAAAGAACAACCACCACAGGCGATTCACTTCCAGTTATACACATTAACCCTTTCC
JMFN029K13+           TTCCAGAAAGAACAACCACCACAGGCGATTCACTTCCAGTTATACACATTAACCCTTTCC
JMSF008E13+           TTCCAGAAAGAACAACCACCACAGGCGATTCACTTCCAGTTATACACATTAACCCTTTCC
                      ____________________________________________________________
consensus             TTCCAGAAAGAACAACCACCACAGGCGATTCACTTCCAGTTATACACATTAACCCTTTCC
 
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rJMSF008E13-          ATATAATCAGTGCCGATGTAACAATCATACCGAGAGTAACAGCTTGAGTGATGACTTGTC
JMFN009H07+           ATATAATCAGTGCCGATGTAACAATCATACCGAGAGTAACAGCTTGAGTGATGACTTGTC
JMFN039P06+           ATATAATCAGTGCCGATGTAACAATCATACCGAGAGTAACAGCTTGAGTGATGACTTGTC
JMFN029K13+           ATATAATCAGTGCCGATGTAACAATCATACCGAGAGTAACAGCTTGAGTGATGACTTGTC
JMSF008E13+           ATATAATCAGTGCCGATGTAACAATCATACCGAGAGTAACAGCTTGAGTGATGACTTGTC
                      ____________________________________________________________
consensus             ATATAATCAGTGCCGATGTAACAATCATACCGAGAGTAACAGCTTGAGTGATGACTTGTC
 
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rJMSF008E13-          TGAACTGTATAGACTTGATGGAATCGATTTGGTCTCCGATCCACCCCATTTCTCG     
JMFN009H07+           TGAACTGTATAGACTTGATGGAATCGATTTGGTCTCCGATCCACCCCATTTCTCGTCGCC
JMFN039P06+           TGAACTGTATAGACTTGATGGAAT--TTTTGGTCTCCGATCCACCCCATTTCTCGTCGCC
JMFN029K13+           TGAACTGTATAGACTTGATGGAATCGATTTGGTCTCCGATCCACCCCATTTCTCGTCGCC
JMSF008E13+           TGAACTGTATAGACTTGATGGAATCGATTTGGTCTCCGATCCACCCCATTTCTCGTCGCC
                      ____________________________________________________________
consensus             TGAACTGTATAGACTTGATGGAATCGATTTGGTCTCCGATCCACCCCATTTCTCGTCGCC
 
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JMFN009H07+           TGAATTGTTGATTGGGAAAAAGAGAAACGCAGT                           
JMFN039P06+           TGAATTGTTGATTGGGAAAAAGAGAAACGCAGT                           
JMFN029K13+           TGAATTGTTGATTGGGAAAAAGAGAAACGCAGTGAAA                       
JMSF008E13+           TGAATTGTTGATTGGGAAAAAGAGAAACGCAGTGAAAGAGACGACGATGACTGTTCGGGC
                      ____________________________________________________________
consensus             TGAATTGTTGATTGGGAAAAAGAGAAACGCAGTGAAAGAGACGACGATGACTGTTCGGGC