| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017G19 | Sequence | 584 | 010586 (5) | gb|KJB29870.1| | 2e-85 | hypothetical protein B456_005G121600 [Gossypium raimondii] | 669 | 010586 (5) | ref|XP_010687074.1| | 8e-94 | PREDICTED: fatty acid 2-hydroxylase 1-like isoform X1 [Beta vulgaris subsp. vul |
| JMFN046N18 | Sequence | 575 | 010586 (5) | gb|KJB29870.1| | 4e-98 | hypothetical protein B456_005G121600 [Gossypium raimondii] | |||||
| JMSF008D11 | Sequence | 289 | 010586 (5) | ref|XP_007023076.1| | 3e-26 | Fatty acid hydroxylase 1 isoform 2 [Theobroma cacao] gb|EOY25698.1| Fatty acid h | 748 | 010586 (5) | ref|XP_010687074.1| | 1e-94 | PREDICTED: fatty acid 2-hydroxylase 1-like isoform X1 [Beta vulgaris subsp. vul |
This contig is upended
. : . : . : . : . : . :
rJMSF008D11- TATTCCTTTATGATAAAAATGATACATAACGA
____________________________________________________________
consensus TATTCCTTTATGATAAAAATGATACATAACGA
. : . : . : . : . : . :
rJMFF017G19- ACTGATGCATATACATTAGTA
rJMSF008D11- AATAATGAATTCTAAAGAATTATGGTTAACAAACAAGAGACTGATGCATATACATTAGTA
____________________________________________________________
consensus AATAATGAATTCTAAAGAATTATGGTTAACAAACAAGAGACTGATGCATATACATTAGTA
. : . : . : . : . : . :
rJMFF017G19- GTCAAAGCATTCTCATACACTAACATTGCCAAGAGCACGGCTACTAAATTTCTCATAATA
rJMSF008D11- GTCAAAGCATTCTCATACACTAACATTGCCAAGAGCACGGCTACTAAATTTCTCATAATA
____________________________________________________________
consensus GTCAAAGCATTCTCATACACTAACATTGCCAAGAGCACGGCTACTAAATTTCTCATAATA
. : . : . : . : . : . :
rJMFF017G19- CTCTCTCACAAAGGCATTGCAGTAGATGAAAGAATGCAGTTGGTGAAAAAAGAATCTTGA
rJMSF008D11- CTCTCTCACAAAGGCATTGCAGTAGATGAAAGAATGCAGTTGGTGAAAAAAGAATCTTGA
____________________________________________________________
consensus CTCTCTCACAAAGGCATTGCAGTAGATGAAAGAATGCAGTTGGTGAAAAAAGAATCTTGA
. : . : . : . : . : . :
rJMFF017G19- AGGCTATTAAAGTCTTTCTTGACAAATGCTTCTGAATTCAATTATCCACTCTTCACATCT
rJMSF008D11- AGGCTATTAAAGTCTTTCTTGACAAATGCTTCTGAATTCAATTATCCACTCTTCACATCT
____________________________________________________________
consensus AGGCTATTAAAGTCTTTCTTGACAAATGCTTCTGAATTCAATTATCCACTCTTCACATCT
. : . : . : . : . : . :
rJMFF017G19- GTTTTTGATGGTGGTAACGTTCCAAACACTCTATCCCACAATGCGGAAGTAATGCCGAAA
rJMSF008D11- GTTTTTGATGGTGGTAACGTTCCAAACACTCTATCCCACAATGCGGAAGTAATGCCGAAA
____________________________________________________________
consensus GTTTTTGATGGTGGTAACGTTCCAAACACTCTATCCCACAATGCGGAAGTAATGCCGAAA
. : . : . : . : . : . :
rJMFF017G19- CCTTTGTTCTGGATACGAAAATGGTGGTTCAGGTGATATCTCTTGAGATTTTTTGGCACA
rJMSF008D11- CCTTTGTTCTGGATACGAAAATGGTGGTTCAGGTGATATCTCTTGAGATTTTTTGGCACA
____________________________________________________________
consensus CCTTTGTTCTGGATACGAAAATGGTGGTTCAGGTGATATCTCTTGAGATTTTTTGGCACA
. : . : . : . : . : . :
rJMFF017G19- TCACTCGTGGGTTGTCCATGGTGCAAGTAGTAATGGGTTACATCATACATCACATAACCC
rJMSF008D11- TCACTCGTGGGTTGTCCATGGTGCAAGTAGTAATGGGTTACATCATACATCACATAACCC
JMFN046N18+ ATGGGTTACATCATACATCACATAACCC
____________________________________________________________
consensus TCACTCGTGGGTTGTCCATGGTGCAAGTAGTAATGGGTTACATCATACATCACATAACCC
. : . : . : . : . : . :
rJMFF017G19- AGTAAGCCTCCTCCGAACAAAGCAGGAGCAGTCAATGGAGTGGCAAAGAGCTTTACTAGG
rJMSF008D11- AGTAAGCCTCCTCCGAACAAAGCAGGAGCAGTCAATGGAGTGGCAAAGAGCTTTACTAGG
JMFN046N18+ AGTAAGCCTCCTCCGAACAAAGCAGGAGCAGTCAATGGAGTGGCAAAGAGCTTTACTAGG
JMFF017G19+ AACAAAGCAGGAGCAGTCAATGGAGTGGCAAAGAGCTTTACTAGG
____________________________________________________________
consensus AGTAAGCCTCCTCCGAACAAAGCAGGAGCAGTCAATGGAGTGGCAAAGAGCTTTACTAGG
. : . : . : . : . : . :
rJMFF017G19- TTCCAGAATGGCACACTGAGAACAGCTGCTGCAGCAGGAGGGAAAACAAGGCGCAGTCCA
rJMSF008D11- TTCCAGAATGGCACACTGAGAACAGCTGCTGCAGCAGGAGGGAAAACAAGGCGCAGCCCA
JMFN046N18+ TTCCAGAATGGCACACTGAGAACAGCTGCTGCAGCAGGAGGGAAAACAAGGCGCAGCCCA
JMFF017G19+ TTCCAGAATGGCACACTGAGAACAGCTGCTGCAGCAGGAGGGAAAACAAGGCGCAGTCCA
____________________________________________________________
consensus TTCCAGAATGGCACACTGAGAACAGCTGCTGCAGCAGGAGGGAAAACAAGGCGCAGTCCA
. : . : . : . : . : . :
rJMFF017G19- TCCATGGGGTGCTTGTGGTGGCAACCATGAAGAAGATAATGAATGGTATTCCCCCAATAG
rJMSF008D11- TCCATGGGGTGCTTGTGGTGGCAACCATGAAGAAGATAATGAATGGTATTCCCCCAATAG
JMFN046N18+ TCCATGGGGTGCTTGTGGTGGCAACCATGAAGAAGATAATGAATGGTATTCCCCCAATAG
JMFF017G19+ TCCATGGGGTGCTTGTGGTGGCAACCATGAAGAAGATAATGAATGGTATTCCCCCAATAG
____________________________________________________________
consensus TCCATGGGGTGCTTGTGGTGGCAACCATGAAGAAGATAATGAATGGTATTCCCCCAATAG
. : . : . : . : . : . :
rJMFF017G19- CTCTTTGTCTCAATATGAAAAAGGAAGCGGTGAAGAACGTATTCCACTAGTGTCCAAATG
rJMSF008D11- CTCTTTGTCTCAATATGAAAAAGGAAGCGGTGAAGAACGTATTCCACTAGTGTCCAAATG
JMFN046N18+ CTCTTTGTCTCAATATGAAAAAGGAAGCGGTGAAGAACGTATTCCACTAGTGTCCAAATG
JMFF017G19+ CTCTTTGTCTCAATATGAAAAAGGAAGCGGTGAAGAACGTATTCCACTAGTGTCCAAATG
____________________________________________________________
consensus CTCTTTGTCTCAATATGAAAAAGGAAGCGGTGAAGAACGTATTCCACTAGTGTCCAAATG
. : . : . : . : . : . :
rJMFF017G19- AAAATGCCAAATACTACATGTAGTGCAACATGAGGAATCGTGAGACCC
rJMSF008D11- AAAATGCCAAATACTACATGTAGTGCACCATGAGGAATCGTGAGACCCATCCGAAT
JMFN046N18+ AAAATGCCAAATACTACATGTAGTGCAACATGAGGAATCGTGAGACCCATCCGAATAGAC
JMFF017G19+ AAAATGCCAAATACTACATGTAGTGCAACATGAGGAATCGTGAGACCCATCCGAATAGAC
____________________________________________________________
consensus AAAATGCCAAATACTACATGTAGTGCAACATGAGGAATCGTGAGACCCATCCGAATAGAC
. : . : . : . : . : . :
JMFN046N18+ ATTGAAACGAACCAGCATACAACTGGGAGCCAAACGAGAGGAATTACCCACCACACAGTG
JMFF017G19+ ATTGAAACGAACCAGCATACAACTGGGAGCCAAACGAGAGGAATTACCCACCACACAGTG
JMSF008D11+ AGCATACAACTGGGAGCCAAACGAGAGGAATTACCCACCACACAGTG
____________________________________________________________
consensus ATTGAAACGAACCAGCATACAACTGGGAGCCAAACGAGAGGAATTACCCACCACACAGTG
. : . : . : . : . : . :
JMFN046N18+ CGGGTGAGAAACTCCCAAAAGTCACTTTCAAAAAACCGAGGACCTTCTCTGCTAGGAATA
JMFF017G19+ CGGGTGAGAAACTCCCAAAAGTCACTTTCAAAAAACCGAGGACCTTCTCTGCTAGGAATA
JMSF008D11+ CGGGTGAGAAACTCCCAAAAGTCACTTTCAAAAAACCGAGGACCTTCTCTGCTAGGAATA
____________________________________________________________
consensus CGGGTGAGAAACTCCCAAAAGTCACTTTCAAAAAACCGAGGACCTTCTCTGCTAGGAATA
. : . : . : . : . : . :
JMFN046N18+ GGCTGATGAACCCACTCCTGATAAGATTCTCCAAGATGGCCAACCTGGAAGACGAGGGGT
JMFF017G19+ GGCTGATGAACCCACTCCTGATAAGATTCTCCAAGATGGCCAACCTGGAAGACGAGGGGT
JMSF008D11+ GGCTGATGAACCCACTCCTGATAAGATTCTCCAAGATGGCCAACCTGGAAGACGAGGGGT
____________________________________________________________
consensus GGCTGATGAACCCACTCCTGATAAGATTCTCCAAGATGGCCAACCTGGAAGACGAGGGGT
. : . : . : . : . : . :
JMFN046N18+ TTATTCAGATCCACCGTGAATTCCTGTGCAACCAT
JMFF017G19+ TTATTCAGATCCACCGTGAATTCCTGTGCAACCAT
JMSF008D11+ TTATTCAGATCCACCGTGAATTCCTGTGCAACCATGGTTGAATTTCTAAGAAAGCTGAAA
____________________________________________________________
consensus TTATTCAGATCCACCGTGAATTCCTGTGCAACCATGGTTGAATTTCTAAGAAAGCTGAAA
. : . : . : . : . : . :
JMSF008D11+ GACAAATATTGGGGTCAGATCTTGAAATGAAGCTCTCGAGATTATGGCGAGCAGCGCTTT
____________________________________________________________
consensus GACAAATATTGGGGTCAGATCTTGAAATGAAGCTCTCGAGATTATGGCGAGCAGCGCTTT