Contig 010585:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS045G06Sequence258010585 (3)ref|XP_009804960.1|1e-09PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180
JMSF007P22Sequence287010585 (3)ref|XP_006340709.1|3e-06PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180165018130gb|EYU38322.1|2e-10hypothetical protein MIMGU_mgv1a025630mg, partial [Erythranthe guttata]
JMSF050H21Sequence671010585 (3)ref|XP_006340709.1|3e-61PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180

Alignment

This contig is upended


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JMSF050H21+                                                           CTCCGGTGAAAG
                      ____________________________________________________________
consensus                                                             CTCCGGTGAAAG
 
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JMSF050H21+           AGTTGGAAGAGAGATCGAAGTAGCGGATACTCTGCGGGAGGTCCCCGGGGATGCCGCCGG
                      ____________________________________________________________
consensus             AGTTGGAAGAGAGATCGAAGTAGCGGATACTCTGCGGGAGGTCCCCGGGGATGCCGCCGG
 
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JMSF050H21+           AGAGCTTGTTCCCGGCGACATTGAAGATTTTCAGGCCGNCGAGCTTCGAAATTTCCGGCG
                      ____________________________________________________________
consensus             AGAGCTTGTTCCCGGCGACATTGAAGATTTTCAGGCCGNCGAGCTTCGAAATTTCCGGCG
 
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JMSF050H21+           GCATTCCGCCGGAGAACGAGTTGTACTGCAGAAAAACAGAATTCAGGAGCGAGCATTTCG
                      ____________________________________________________________
consensus             GCATTCCGCCGGAGAACGAGTTGTACTGCAGAAAAACAGAATTCAGGAGCGAGCATTTCG
 
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JMSF050H21+           CGAGGGAGGAAGGAACACTCCCGTTGAATGAATTGGAGCTGATGCTCAGCTTACGTAGCA
                      ____________________________________________________________
consensus             CGAGGGAGGAAGGAACACTCCCGTTGAATGAATTGGAGCTGATGCTCAGCTTACGTAGCA
 
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JMSF050H21+           ACCGGAGATTAGCGATTTGCGGGGTAAGCGGGCCGCCGAGCTGGCGCCGAGGGAGGTTGA
                      ____________________________________________________________
consensus             ACCGGAGATTAGCGATTTGCGGGGTAAGCGGGCCGCCGAGCTGGCGCCGAGGGAGGTTGA
 
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JMFS045G06+                                  CATTTCACGCCGCCCCAGTCGCAGGGAGCCGCCGGTG
JMSF050H21+           GTTCACTCACGCGACCATTCTCACATTTCACGCCGCCCCAGTCGCAGGGAGCCGCCGGCG
                      ____________________________________________________________
consensus             GTTCACTCACGCGACCATTCTCACATTTCACGCCGCCCCAGTCGCAGGGAGCCGCCGGTG
 
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JMFS045G06+           ACGACGAGTCCCAGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTCTGCTTGAAAGATG
JMSF050H21+           ACGACGAGTCCCAGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTGAGCTTGAAAGA-G
JMSF007P22+                       AGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTGAGCTTGAAAGA-G
                      ____________________________________________________________
consensus             ACGACGAGTCCCAGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTGAGCTTGAAAGA-G
 
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JMFS045G06+           TTAAGCGCCTGGATCTCGGCTAGGTCTTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
JMSF050H21+           TTAAGCGCCTGGATCTCGGCTAGGTTCTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
JMSF007P22+           TTAAGCGCCTGGATCTCGGCTAGGTTCTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
                      ____________________________________________________________
consensus             TTAAGCGCCTGGATCTCGGCTAGGTTCTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
 
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JMFS045G06+           ACAAGAACAATACAGAAAATCAGTGCAGGTAAGATGGAAGACATGGATGGAAACGGTATC
JMSF050H21+           ACAAGAACAATACAGAAAATCAGTGCAGGGAAGATGGAAGACATGGATGGAAACGGTATC
JMSF007P22+           ACAAGAACAATACAGAAAATCAGTGCAGGGAAGATGGAAGACATGGATGGAAACGGTATC
                      ____________________________________________________________
consensus             ACAAGAACAATACAGAAAATCAGTGCAGGGAAGATGGAAGACATGGATGGAAACGGTATC
 
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JMFS045G06+           ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAG                   
JMSF050H21+           ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAGGTAGCCATACTCATAGATA
JMSF007P22+           ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAGGTAGCCATACTCATAGATA
                      ____________________________________________________________
consensus             ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAGGTAGCCATACTCATAGATA
 
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JMSF050H21+           CACACACAACCTCTCTCTCTCTATATCTGTGTATGTAAAGCTTTCTCTCTCTAGAGAA  
JMSF007P22+           CACACACAACCTCTCTCTCTCTATATCTGTGTATGTAAAGCTTTCTCTCTCTAGAGAACC
                      ____________________________________________________________
consensus             CACACACAACCTCTCTCTCTCTATATCTGTGTATGTAAAGCTTTCTCTCTCTAGAGAACC