Contig 010582:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS044D01Sequence632010582 (2)ref|XP_009762907.1|3e-39PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic
JMSF007H05Sequence341010582 (2)769021369ref|XP_004237613.1|2e-64PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS044D01+ ATAACTGATATCAATTTTGAGTAAACCCCATTGTCAGCTATATAC
                      ____________________________________________________________
consensus ATAACTGATATCAATTTTGAGTAAACCCCATTGTCAGCTATATAC
 
. : . : . : . : . : . :
JMFS044D01+ CACCGTTGCCGTTGCATCCATCTGAATACCTCAAGGCATTGAAGCCATTTGTCACTCTTG
                      ____________________________________________________________
consensus CACCGTTGCCGTTGCATCCATCTGAATACCTCAAGGCATTGAAGCCATTTGTCACTCTTG
 
. : . : . : . : . : . :
JMFS044D01+ CCGAGCTCTTCAAAGAGCAAGAAACAGTGCTCTGTACGCACCATTTTCACGTACTTGTTC
                      ____________________________________________________________
consensus CCGAGCTCTTCAAAGAGCAAGAAACAGTGCTCTGTACGCACCATTTTCACGTACTTGTTC
 
. : . : . : . : . : . :
JMFS044D01+ AGAGTGGCCACCAAAGGCTTCTTGTCCGTGAAGTTGTTCATCATTTGAGCAACGAGCTCC
                      ____________________________________________________________
consensus AGAGTGGCCACCAAAGGCTTCTTGTCCGTGAAGTTGTTCATCATTTGAGCAACGAGCTCC
 
. : . : . : . : . : . :
JMFS044D01+ TCGGCCTCCGAAGATGGGCTCCGGCTCGCTGAACCCGACTTTCTTTTGGTCTGAGTCGAG
                      ____________________________________________________________
consensus TCGGCCTCCGAAGATGGGCTCCGGCTCGCTGAACCCGACTTTCTTTTGGTCTGAGTCGAG
 
. : . : . : . : . : . :
JMFS044D01+ AGGCAACTTATAATAGTCGTCTTCTTCCTGGGAGCACATGAAGGGCTCTTGGTGTAATCT
JMSF007H05+ TCTTCTTCCTGGGAGCACATGAAGGGCTCTTGGTGTAATCT
                      ____________________________________________________________
consensus AGGCAACTTATAATAGTCGTCTTCTTCCTGGGAGCACATGAAGGGCTCTTGGTGTAATCT
 
. : . : . : . : . : . :
JMFS044D01+ AGCGAAAAACCGTGGGTGAATTTAGGGTTTGAAGAAAGTTGAAGGTAGCCAGATGAGGAA
JMSF007H05+ AGCGAAAAACCGTGGGTGAATTTAGGGTTTGAAGAAAGTTGAAGGTAGCCAGATGAGGAA
                      ____________________________________________________________
consensus AGCGAAAAACCGTGGGTGAATTTAGGGTTTGAAGAAAGTTGAAGGTAGCCAGATGAGGAA
 
. : . : . : . : . : . :
JMFS044D01+ GGCATTACGAGGAACTGCATTCTATCCCACTGAAATGGTGGAGAGCACTCCGAGAAGGCA
JMSF007H05+ GGCATTACGAGGAACTGCATTCTATCCCACTGAAATGGTGGAGAGCACTCCGAGAAGGCA
                      ____________________________________________________________
consensus GGCATTACGAGGAACTGCATTCTATCCCACTGAAATGGTGGAGAGCACTCCGAGAAGGCA
 
. : . : . : . : . : . :
JMFS044D01+ GTCGAGGACGAGAAGTTCTTATTTTATGTCTGCGAAGTGGCGGAGTGGAGCACAGGCTGA
JMSF007H05+ GTCGAGGACGAGAAGTTCTTATTTTATGTCTGCGAAGTGGCGGAGTGGAGCACAGGCTGA
                      ____________________________________________________________
consensus GTCGAGGACGAGAAGTTCTTATTTTATGTCTGCGAAGTGGCGGAGTGGAGCACAGGCTGA
 
. : . : . : . : . : . :
JMFS044D01+ GCAGTGGTGGCGTGGTCCGCGACGGTGGCGGCCGGCGGCGTGGGGCAGCAGGATGGAGCA
JMSF007H05+ GCAGTGGTGGCGTGGTCCGCGACGGTGGCGGCCGGCGGCGTGGGGCAGCAGGATGGAGCA
                      ____________________________________________________________
consensus GCAGTGGTGGCGTGGTCCGCGACGGTGGCGGCCGGCGGCGTGGGGCAGCAGGATGGAGCA
 
. : . : . : . : . : . :
JMFS044D01+ GAGGCGCGGAGGACGACAGTCGTGGGCTGGTAGCCTGGTGCCGGTGC
JMSF007H05+ GAGGCGCGGAGGACGACAGTCGTGGGCTGGTAGCCTGGTGCCGGTGCTTGGTGACAGACC
                      ____________________________________________________________
consensus GAGGCGCGGAGGACGACAGTCGTGGGCTGGTAGCCTGGTGCCGGTGCTTGGTGACAGACC