| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008L08 | Sequence | 578 | 010580 (7) | ref|XP_006357223.1| | 2e-57 | PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum] | 684 | 005351 (8) | ref|XP_009602624.1| | 3e-69 | PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform |
| JMFF015J16 | Sequence | 561 | 010580 (7) | ref|XP_006357223.1| | 9e-54 | PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum] | 753 | 005351 (8) | ref|XP_009602624.1| | 4e-90 | PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform |
| JMSF005B13 | Sequence | 262 | 010580 (7) | ref|XP_006357223.1| | 1e-06 | PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum] | 269 | 005351 (8) | |||
| JMSF007E21 | Sequence | 343 | 010580 (7) | ref|XP_006357223.1| | 6e-15 | PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum] | 796 | 005351 (8) | ref|XP_009602624.1| | 1e-108 | PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform |
| JMSF011F21 | Sequence | 341 | 010580 (7) | ref|XP_006357223.1| | 3e-14 | PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum] | 804 | 005351 (8) | ref|XP_009602624.1| | 2e-108 | PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform |
| JMSF037B22 | Sequence | 694 | 010580 (7) | ref|XP_006357223.1| | 4e-79 | PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum] | 607 | 005351 (8) | ref|XP_009602624.1| | 4e-62 | PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform |
| JMSF040J02 | Sequence | 654 | 010580 (7) | ref|XP_006357223.1| | 3e-69 | PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum] | 836 | 005351 (8) | ref|XP_009602624.1| | 5e-111 | PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform |
This contig is upended
. : . : . : . : . : . :
JMSF037B22+ GTTCCCCTCAAA
____________________________________________________________
consensus GTTCCCCTCAAA
. : . : . : . : . : . :
JMSF037B22+ ATCATCCTTGGAAAACCTAGCCAATTCCGCCGGAATCGTCCCGGAGAGATCATTGTTCGA
JMSF040J02+ CCCGGAGAGATCATTGTTCGA
____________________________________________________________
consensus ATCATCCTTGGAAAACCTAGCCAATTCCGCCGGAATCGTCCCGGAGAGATCATTGTTCGA
. : . : . : . : . : . :
JMSF037B22+ GACGGCGAAACGTTTGAGTCTCTCCAGGCGTCCGATCTCGTAGGGAATCTCACCGGAGAG
JMFF008L08+ CTCGTAGGGAATCTCACCGGAGAG
JMFF015J16+ CGGAGAG
JMSF040J02+ GACGGCGAAACGTTTGAGTCTCTCCAGGCGTCCGATCTCGTAGGGAATCTCACCGGAGAG
____________________________________________________________
consensus GACGGCGAAACGTTTGAGTCTCTCCAGGCGTCCGATCTCGTAGGGAATCTCACCGGAGAG
. : . : . : . : . : . :
JMSF037B22+ CTGATTATTGTTGAGAACGAGAGTATTCAAAAACTTGCAGTTAACGAGATCAGGAGGGAT
JMFF008L08+ CTGATTATTGTTGAGAACGAGAGTATTCAAAAACTTGCAGTTAACGAGATCAGGAGGGAT
JMFF015J16+ CTGATTATTGTTGAGAACGAGAGTATTCAAAAACTTGCAGTTAACGAGATCAGGAGGGAT
JMSF040J02+ CTGATTATTGTTGAGAACGAGAGTATTCAAAAACTTGCAGTTAACGAGATCAGGAGGGAT
____________________________________________________________
consensus CTGATTATTGTTGAGAACGAGAGTATTCAAAAACTTGCAGTTAACGAGATCAGGAGGGAT
. : . : . : . : . : . :
JMSF037B22+ GGCGCCGGAGAAGGAGTTACCAGAGAGATCAAGGGAGACAAGGTAAGGTAGCCAGACACA
JMFF008L08+ GGCGCCGGAGAAGGAGTTACCAGAGAGATCAAGGGAGACAAGGTAAGGTAGCCAGACACA
JMFF015J16+ GGCGCCGGAGAAGGAGTTACCAGAGAGATCAAGGGAGACAAGGTAAGGTAGCCAGACACA
JMSF040J02+ GGCGCCGGAGAAGGAGTTACCAGAGAGATCAAGGGAGACAAGGTAAGGTAGCCAGACACA
____________________________________________________________
consensus GGCGCCGGAGAAGGAGTTACCAGAGAGATCAAGGGAGACAAGGTAAGGTAGCCAGACACA
. : . : . : . : . : . :
JMSF037B22+ GATTTGCGAAGGAATAGAACCAGAAAGTGAGTTACCAGAGAGATCCAGAGACTGGAGAGA
JMFF008L08+ GATTTGCGAAGGAATAGAACCAGAAAGTGAGTTACCAGAGAGATCCAGAGACTGGAGAGA
JMFF015J16+ GATTTGCGAAGGAATAGAACCAGAAAGTGAGTTACCAGAGAGATCCAGAGACTGGAGAGA
JMSF040J02+ GATTTGCGAAGGAATAGAACCAGAAAGTGAGTTACCAGAGAGATCCAGAGACTGGAGAGA
____________________________________________________________
consensus GATTTGCGAAGGAATAGAACCAGAAAGTGAGTTACCAGAGAGATCCAGAGACTGGAGAGA
. : . : . : . : . : . :
JMSF037B22+ GCGGCAAAACTGGAGAGAAGCAGGGAGCGAACCGGAGAGCGACATCGCCGGTAGCTGGAT
JMFF008L08+ GCGGCAAAACTGGAGAGAAGCAGGGAGCGAACCGGAGAGCGACATCGCCGGTAGCTGGAT
JMFF015J16+ GCGGCAAAACTGGAGAGAAGCAGGGAGCGAACCGGAGAGCGACATCGCCGGTAGCTGGAT
JMSF040J02+ GCGGCAAAACTGGAGAGAAGCAGGGAGCGAACCGGAGAGCGACATCGCCGGTAGCTGGAT
____________________________________________________________
consensus GCGGCAAAACTGGAGAGAAGCAGGGAGCGAACCGGAGAGCGACATCGCCGGTAGCTGGAT
. : . : . : . : . : . :
JMSF037B22+ AGAAATCAACCTATTCTCCTTCTGATTCCAGCAGGAAACCCCGTCGAGCTTGCAGATTGA
JMFF008L08+ AGAAATCAACCTATTCTCCTTCTGATTCCAGCAGGAAACCCCGTCGAGCTTGCAGATTGA
JMFF015J16+ AGAAATCAACCTATTCTCCTTCTGATTCCAGCAGGAAACCCCGTCGAGCTTGCAGATTGA
JMSF040J02+ AGAAATCAACCTATTCTCCTTCTGATTCCAGCAGGAAACCCCGTCGAGCTTGCAGATTGA
JMSF011F21+ TTCTGATTCCAGCAGGAAACCCCGTCGAGCTTGCAGATTGA
JMSF007E21+ CCTTCTGATTCCAGCAGGAAACCCCGTCGAGCTTGCAGATTGA
____________________________________________________________
consensus AGAAATCAACCTATTCTCCTTCTGATTCCAGCAGGAAACCCCGTCGAGCTTGCAGATTGA
. : . : . : . : . : . :
JMSF037B22+ AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
JMFF008L08+ AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
JMFF015J16+ AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
JMSF005B13+ AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
JMSF040J02+ AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
JMSF011F21+ AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
JMSF007E21+ AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
____________________________________________________________
consensus AGCTGCGGAGTCGTTGGAGAACGACCACGCACCGAGCTTATTGAGCGGATCGGAGAGCGC
. : . : . : . : . : . :
JMSF037B22+ GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
JMFF008L08+ GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
JMFF015J16+ GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
JMSF005B13+ GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
JMSF040J02+ GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
JMSF011F21+ GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
JMSF007E21+ GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
____________________________________________________________
consensus GGCTTTGACGCCTTCTAAGCACCGCACGTCGTCCTCTGGAACGACGGTTTCCGTTGAGGC
. : . : . : . : . : . :
JMSF037B22+ GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
JMFF008L08+ GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
JMFF015J16+ GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
JMSF005B13+ GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
JMSF040J02+ GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
JMSF011F21+ GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
JMSF007E21+ GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
____________________________________________________________
consensus GGCAGCGAAAGCGAGGCTCACGTCGAGGAAGAAGAAGAGGACGAGGACGAAGGCGGTTGT
. : . : . : . : . : . :
JMSF037B22+ CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
JMFF008L08+ CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
JMFF015J16+ CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
JMSF005B13+ CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
JMSF040J02+ CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
JMSF011F21+ CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
JMSF007E21+ CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
____________________________________________________________
consensus CGCAGCCATTGTGACGGCGGCGGTGGCGGCGGAGCGCGGAGGAGAGAAGATTGCGAAGTT
. : . : . : . : . : . :
JMSF037B22+ TTAGGAACGGAAATGGATGAG
JMFF008L08+ TTAGGAACGGAAAT
JMFF015J16+ TTAGGAACGGAAAT
JMSF005B13+ TTAGGAACGGAAATGGATGAG
JMSF040J02+ TTAGGAACGGAAATGGATGAGAAAAAGCATGC
JMSF011F21+ TTAGGAACGGAAATGGATGAGAAAAAGCATGCGAGTGAGGGTTGAAGTGACTGAAGTGTC
JMSF007E21+ TTAGGAACGGAAATGGATGAGAAAAAGCATGCGAGTGAGGGTTGAAGTGACTGAAGTGTC
____________________________________________________________
consensus TTAGGAACGGAAATGGATGAGAAAAAGCATGCGAGTGAGGGTTGAAGTGACTGAAGTGTC