Contig 010578: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF032P20- TTCTGTTCATACAAG
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consensus TTCTGTTCATACAAG
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rJMSF032P20- GGATACATAAAAGAAAAAGATCAATTGAGTAGTAATTGAATAAAGAAAAAGGACTGTAGC
rJMSF007D13- ATAAAAGAAAAAGATCAATTGAGTAGTAATTGAATAAAGAAAAAGGACTGTAGC
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consensus GGATACATAAAAGAAAAAGATCAATTGAGTAGTAATTGAATAAAGAAAAAGGACTGTAGC
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rJMSF032P20- TTCAGACTTCAATTTTAGTGCTGGTACAAATATAGAGCCTTTGAATCATGGTATAGCCAT
rJMSF007D13- TTCAGACTTCAATTTTAGTGCTGGTACAAATATAGAGCCTTTGAATCATGGTATAGCCAT
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consensus TTCAGACTTCAATTTTAGTGCTGGTACAAATATAGAGCCTTTGAATCATGGTATAGCCAT
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rJMSF032P20- GGAGTTAGCTTGTATCAGCTCACAGAAGAGAAGGGGTTCAAAATCATGTCTTTCAAACAA
rJMSF007D13- GGAGTTAGCTTGTATCAGCTCACAGAAGAGAAGGGGTTCAAAATCATGTCTTTCAAACAA
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consensus GGAGTTAGCTTGTATCAGCTCACAGAAGAGAAGGGGTTCAAAATCATGTCTTTCAAACAA
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rJMSF032P20- TTATGGCAATGACAAAGTAGTCGAAGGCGGGGGGACTGATCCCTGGCCTTGATGCCCAAA
rJMSF007D13- TTATGGCAATGACAAAGTAGTCGAAGGCGGGGGGACTGATCCCTGGCCTTGATGCCCAAA
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consensus TTATGGCAATGACAAAGTAGTCGAAGGCGGGGGGACTGATCCCTGGCCTTGATGCCCAAA
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rJMSF032P20- CAGTGGTCTGTGTCAGACAACTATACTGATGGCGATGTAGTCAAGGGTGGAGGGAGCTGA
rJMSF007D13- CAGTGGTCTGTGTCAGACAACTATACTGATGGCGATGTAGTCAAGGGTGGAGGGAGCTGA
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consensus CAGTGGTCTGTGTCAGACAACTATACTGATGGCGATGTAGTCAAGGGTGGAGGGAGCTGA
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rJMSF032P20- GTCCCTGGCCTTGATGTCCATCCTTTTCTATTCCTGTAGGCCTCAACTGCTTTCAAACGA
rJMSF007D13- GTCCCTGGCCTTGATGTCCATCCTTTTCTATTCCTGTAGGCCTCAACTGCTTTCAAACGA
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consensus GTCCCTGGCCTTGATGTCCATCCTTTTCTATTCCTGTAGGCCTCAACTGCTTTCAAACGA
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rJMSF032P20- AGCCTTTCTTGTGAAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
rJMSF007D13- AGCCTTTCTTGTGAAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
JMSF032P20+ AAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
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consensus AGCCTTTCTTGTGAAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
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rJMSF032P20- AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
rJMSF007D13- AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
JMSF032P20+ AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
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consensus AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
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rJMSF032P20- AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
rJMSF007D13- AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
JMSF032P20+ AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
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consensus AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
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rJMSF032P20- CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
rJMSF007D13- CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
JMSF032P20+ CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
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consensus CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
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rJMSF032P20- TCAGTTACTTGTTTCCTTTTCCTTTTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
rJMSF007D13- TCAGTTACTTGTTTCCTTTTCC--TTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
JMSF032P20+ TCAGTTACTTGTTTCCTTTTCCTTTTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
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consensus TCAGTTACTTGTTTCCTTTTCCTTTTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
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rJMSF032P20- GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATT
rJMSF007D13- GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATTATCA
JMSF032P20+ GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATTATCA
JMSF007D13+ TCA
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consensus GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATTATCA
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rJMSF007D13- CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
JMSF032P20+ CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
JMSF007D13+ CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
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consensus CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
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rJMSF007D13- ATGATTT
JMSF032P20+ ATGATTTTGCGGAGCTTAGAAGGGAGGGCATCGACGGAGGAGGGGTCAGGTGGGGGCGGG
JMSF007D13+ ATGATTTTGCGGAGCTTAGAAGGGAGGGCATCGACGGAGGAGGGGTCAGGTGGGGGCGGG
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consensus ATGATTTTGCGGAGCTTAGAAGGGAGGGCATCGACGGAGGAGGGGTCAGGTGGGGGCGGG
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JMSF032P20+ AGTCTGGTATTCCCTTTATGCGATTCTCTGTAATTCTTCTCCCTTCTCTTCCTTCCTTTG
JMSF007D13+ AGTCTGGTATTCCCTTTATGCGATTCTCTGTAATTCTTCTCCCTTCTCTTCCTTCCTTTG
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consensus AGTCTGGTATTCCCTTTATGCGATTCTCTGTAATTCTTCTCCCTTCTCTTCCTTCCTTTG
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JMSF032P20+ GCTCCCATCTCTCTCTCTCAATTAGTTTTGCTTAAACCCTAATCTTATTTTCTTCACCAA
JMSF007D13+ GCTCCCATCTCTCTCTCTCAATTAGTTTTGCTTAAACCCTAATCTTATTTTCTTCACCAA
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consensus GCTCCCATCTCTCTCTCTCAATTAGTTTTGCTTAAACCCTAATCTTATTTTCTTCACCAA
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JMSF032P20+ TACCCTTATGCCTTAAGCTTCAAGTCTTGAACTGCCAAATCCCTACCACCGCGTCGT
JMSF007D13+ TACCCTTATGCCTTAAGCTTCAAGTCTTGAACTGCCAAATCCCTACCACCGCGTCGTGTT
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consensus TACCCTTATGCCTTAAGCTTCAAGTCTTGAACTGCCAAATCCCTACCACCGCGTCGTGTT