Contig 010578:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032P20-                                                       TTCTGTTCATACAAG
                      ____________________________________________________________
consensus                                                          TTCTGTTCATACAAG
 
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rJMSF032P20-          GGATACATAAAAGAAAAAGATCAATTGAGTAGTAATTGAATAAAGAAAAAGGACTGTAGC
rJMSF007D13-                ATAAAAGAAAAAGATCAATTGAGTAGTAATTGAATAAAGAAAAAGGACTGTAGC
                      ____________________________________________________________
consensus             GGATACATAAAAGAAAAAGATCAATTGAGTAGTAATTGAATAAAGAAAAAGGACTGTAGC
 
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rJMSF032P20-          TTCAGACTTCAATTTTAGTGCTGGTACAAATATAGAGCCTTTGAATCATGGTATAGCCAT
rJMSF007D13-          TTCAGACTTCAATTTTAGTGCTGGTACAAATATAGAGCCTTTGAATCATGGTATAGCCAT
                      ____________________________________________________________
consensus             TTCAGACTTCAATTTTAGTGCTGGTACAAATATAGAGCCTTTGAATCATGGTATAGCCAT
 
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rJMSF032P20-          GGAGTTAGCTTGTATCAGCTCACAGAAGAGAAGGGGTTCAAAATCATGTCTTTCAAACAA
rJMSF007D13-          GGAGTTAGCTTGTATCAGCTCACAGAAGAGAAGGGGTTCAAAATCATGTCTTTCAAACAA
                      ____________________________________________________________
consensus             GGAGTTAGCTTGTATCAGCTCACAGAAGAGAAGGGGTTCAAAATCATGTCTTTCAAACAA
 
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rJMSF032P20-          TTATGGCAATGACAAAGTAGTCGAAGGCGGGGGGACTGATCCCTGGCCTTGATGCCCAAA
rJMSF007D13-          TTATGGCAATGACAAAGTAGTCGAAGGCGGGGGGACTGATCCCTGGCCTTGATGCCCAAA
                      ____________________________________________________________
consensus             TTATGGCAATGACAAAGTAGTCGAAGGCGGGGGGACTGATCCCTGGCCTTGATGCCCAAA
 
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rJMSF032P20-          CAGTGGTCTGTGTCAGACAACTATACTGATGGCGATGTAGTCAAGGGTGGAGGGAGCTGA
rJMSF007D13-          CAGTGGTCTGTGTCAGACAACTATACTGATGGCGATGTAGTCAAGGGTGGAGGGAGCTGA
                      ____________________________________________________________
consensus             CAGTGGTCTGTGTCAGACAACTATACTGATGGCGATGTAGTCAAGGGTGGAGGGAGCTGA
 
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rJMSF032P20-          GTCCCTGGCCTTGATGTCCATCCTTTTCTATTCCTGTAGGCCTCAACTGCTTTCAAACGA
rJMSF007D13-          GTCCCTGGCCTTGATGTCCATCCTTTTCTATTCCTGTAGGCCTCAACTGCTTTCAAACGA
                      ____________________________________________________________
consensus             GTCCCTGGCCTTGATGTCCATCCTTTTCTATTCCTGTAGGCCTCAACTGCTTTCAAACGA
 
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rJMSF032P20-          AGCCTTTCTTGTGAAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
rJMSF007D13-          AGCCTTTCTTGTGAAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
JMSF032P20+                        AAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
                      ____________________________________________________________
consensus             AGCCTTTCTTGTGAAGCTTCATGTGCAGTCTTCAGTGCCTTCATCTTTGGGAGGGCAGCC
 
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rJMSF032P20-          AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
rJMSF007D13-          AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
JMSF032P20+           AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
                      ____________________________________________________________
consensus             AACTTGGGGGGAGCATCAACAACTTCCCCAAATTTTATTTGTTCATGCCTAGGGAAGTCC
 
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rJMSF032P20-          AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
rJMSF007D13-          AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
JMSF032P20+           AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
                      ____________________________________________________________
consensus             AAGTGTTCTTCTGTCCTGGTCTTCTTGCGCTTCTTTTTCCTCTCTTCCAAGTGCTGCTTC
 
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rJMSF032P20-          CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
rJMSF007D13-          CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
JMSF032P20+           CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
                      ____________________________________________________________
consensus             CTACGCTCCTTTCTCTTTGAACCAGCACCACCAAACTCCTCAGTTGATTCAAACCGAAGG
 
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rJMSF032P20-          TCAGTTACTTGTTTCCTTTTCCTTTTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
rJMSF007D13-          TCAGTTACTTGTTTCCTTTTCC--TTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
JMSF032P20+           TCAGTTACTTGTTTCCTTTTCCTTTTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
                      ____________________________________________________________
consensus             TCAGTTACTTGTTTCCTTTTCCTTTTTTTGTTTTTCATTTCCGGGACATTACTTTCTGCA
 
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rJMSF032P20-          GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATT    
rJMSF007D13-          GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATTATCA
JMSF032P20+           GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATTATCA
JMSF007D13+                                                                    TCA
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consensus             GGCTTGTCACCATTAGTTTTCCTTTTGACCTCAGAGACTTTAGTGTTACCCTTATTATCA
 
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rJMSF007D13-          CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
JMSF032P20+           CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
JMSF007D13+           CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
                      ____________________________________________________________
consensus             CCGCCATCTCCTTCGGCCCTGTTTATTATTGATGATTTCTTTTGAACTCCTGTTAACCCC
 
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rJMSF007D13-          ATGATTT                                                     
JMSF032P20+           ATGATTTTGCGGAGCTTAGAAGGGAGGGCATCGACGGAGGAGGGGTCAGGTGGGGGCGGG
JMSF007D13+           ATGATTTTGCGGAGCTTAGAAGGGAGGGCATCGACGGAGGAGGGGTCAGGTGGGGGCGGG
                      ____________________________________________________________
consensus             ATGATTTTGCGGAGCTTAGAAGGGAGGGCATCGACGGAGGAGGGGTCAGGTGGGGGCGGG
 
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JMSF032P20+           AGTCTGGTATTCCCTTTATGCGATTCTCTGTAATTCTTCTCCCTTCTCTTCCTTCCTTTG
JMSF007D13+           AGTCTGGTATTCCCTTTATGCGATTCTCTGTAATTCTTCTCCCTTCTCTTCCTTCCTTTG
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consensus             AGTCTGGTATTCCCTTTATGCGATTCTCTGTAATTCTTCTCCCTTCTCTTCCTTCCTTTG
 
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JMSF032P20+           GCTCCCATCTCTCTCTCTCAATTAGTTTTGCTTAAACCCTAATCTTATTTTCTTCACCAA
JMSF007D13+           GCTCCCATCTCTCTCTCTCAATTAGTTTTGCTTAAACCCTAATCTTATTTTCTTCACCAA
                      ____________________________________________________________
consensus             GCTCCCATCTCTCTCTCTCAATTAGTTTTGCTTAAACCCTAATCTTATTTTCTTCACCAA
 
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JMSF032P20+           TACCCTTATGCCTTAAGCTTCAAGTCTTGAACTGCCAAATCCCTACCACCGCGTCGT   
JMSF007D13+           TACCCTTATGCCTTAAGCTTCAAGTCTTGAACTGCCAAATCCCTACCACCGCGTCGTGTT
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consensus             TACCCTTATGCCTTAAGCTTCAAGTCTTGAACTGCCAAATCCCTACCACCGCGTCGTGTT