Contig 010576:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015E19Sequence408010576 (2)ref|XP_008339250.1|122PREDICTED: uncharacterized protein LOC103402287 [Malus domestica]709021252ref|XP_008236633.1|102PREDICTED: uncharacterized protein LOC103335407 [Prunus mume]
JMSF007B03Sequence271010576 (2)773007030 (2)ref|XP_009625720.1|2e-58PREDICTED: two-component response regulator-like APRR2 [Nicotiana tomentosiform

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF015E19+ CTTTCAAAGCTACAATTGCATCATTAACAAGGAGCATGCAAAGCGGGAG
                      ____________________________________________________________
consensus CTTTCAAAGCTACAATTGCATCATTAACAAGGAGCATGCAAAGCGGGAG
 
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JMFF015E19+ CTCGCGTTTGAAGGCATCGATCTTCCGCATTTCATCCTCGAGCCTGGCGACATAATCATC
                      ____________________________________________________________
consensus CTCGCGTTTGAAGGCATCGATCTTCCGCATTTCATCCTCGAGCCTGGCGACATAATCATC
 
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JMFF015E19+ GATCTTCAACACTCTGTCGGATAAGCTCCCGATCAGGGAGATTTCAGCGAGAAACTCAGT
                      ____________________________________________________________
consensus GATCTTCAACACTCTGTCGGATAAGCTCCCGATCAGGGAGATTTCAGCGAGAAACTCAGT
 
. : . : . : . : . : . :
JMFF015E19+ GATCGTTCTGGGAACGAAAACGGGCCTACAATCCAAGCTGAGTTCAGATGGAATCGAACT
JMSF007B03+ AATCCAAGCTGAGTTCAGATGGAATCGAACT
                      ____________________________________________________________
consensus GATCGTTCTGGGAACGAAAACGGGCCTACAATCCAAGCTGAGTTCAGATGGAATCGAACT
 
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JMFF015E19+ CATCTTCATCTCCCAGATCCTTTCAGCGCAATCAGATTAATTAGGTCCTTGTATTAAAAT
JMSF007B03+ CATCTTCATCTCCCAGATCCTTTCAGCGCAATCAGATTAATTAGGTCCTTGTATTAAAAT
                      ____________________________________________________________
consensus CATCTTCATCTCCCAGATCCTTTCAGCGCAATCAGATTAATTAGGTCCTTGTATTAAAAT
 
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JMFF015E19+ CAAAGGCCGAATCACATAGAATAGAAAGATGGAAAATCAGTGAAGATGCGATGCCTTATA
JMSF007B03+ CAAAGGCCGAATCACATAGAATAGAAAGATGGAAAATCAGTGAAGATGCGATGCCTTATA
                      ____________________________________________________________
consensus CAAAGGCCGAATCACATAGAATAGAAAGATGGAAAATCAGTGAAGATGCGATGCCTTATA
 
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JMFF015E19+ TATAGAGAGATCTCTTGAGAGAGAGAGAGAGAGAAAAGGAAGAAGGCGAAGATTCTGTT
JMSF007B03+ TATAGAGAGATCTCTTGAGAGAGAGAGAGAGAGAAAAGGAAGAAGGCGAAGATTCTGTTA
                      ____________________________________________________________
consensus TATAGAGAGATCTCTTGAGAGAGAGAGAGAGAGAAAAGGAAGAAGGCGAAGATTCTGTTA
 
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JMSF007B03+ AAACAACGCCGGGTTTTGACATAGAAGAAAGGAGGGAAGCAGCGATGCACATTGCACATA
                      ____________________________________________________________
consensus AAACAACGCCGGGTTTTGACATAGAAGAAAGGAGGGAAGCAGCGATGCACATTGCACATA