Contig 010575:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030F08Sequence296010575 (2)826016984ref|XP_009783461.1|301PREDICTED: uncharacterized protein LOC104232062 [Nicotiana sylvestris]
JMSF006M04Sequence315010575 (2)329006404 (6)ref|XP_009792144.1|3e-33PREDICTED: porphobilinogen deaminase, chloroplastic-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF030F08+                                       GAGAATTTGCNAACCNGGAAAAAAAAAAAGGT
JMSF006M04+                                                          AAAAAAAAAAGGT
                      ____________________________________________________________
consensus                                         GAGAATTTGCNAACCNGGAAAAAAAAAAAGGT
 
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JMFF030F08+           GAAATGACAGAGTGTGTAGAATGTAGGAGTTGAGCTTACTCAAAAATGGGGTTAACGCCC
JMSF006M04+           GAAATGACAGAGTGTGTAGAATGTAGGAGTTGAGCTTACTCAAAAATGGGGTTAACGCCC
                      ____________________________________________________________
consensus             GAAATGACAGAGTGTGTAGAATGTAGGAGTTGAGCTTACTCAAAAATGGGGTTAACGCCC
 
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JMFF030F08+           ACGTTCTTGTGAAATGTGTTTGAGTTTCTGCGATTTGCAGCTGAAGCACTAGAGAGGAGG
JMSF006M04+           ACGTTCTTGTGAAATGTGTTTGAGTTTCTGCGATTTGCAGCTGAAGCACTAGAGAGGAGG
                      ____________________________________________________________
consensus             ACGTTCTTGTGAAATGTGTTTGAGTTTCTGCGATTTGCAGCTGAAGCACTAGAGAGGAGG
 
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JMFF030F08+           GTTAACCTTGTTGGATCTAGTCATCACAAATTCTCAACTTTAGGAGCTTCAATGTTGGAT
JMSF006M04+           GTTAACCTTGTTGGATCTAGTCATCACAAATTCTCAACTTTAGGAGCTTCAATGTTGGAT
                      ____________________________________________________________
consensus             GTTAACCTTGTTGGATCTAGTCATCACAAATTCTCAACTTTAGGAGCTTCAATGTTGGAT
 
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JMFF030F08+           TTAAGCATTTGTTACTTGATAGAGGAAGTGAGAAACTGAGCGCCCTTTCTCGGTTCGGCA
JMSF006M04+           TTAAGCATTTGTTACTTGATAGAGGAAGTGAGAAACTGAGCGCCCTTTCTCGGTTCGGCA
                      ____________________________________________________________
consensus             TTAAGCATTTGTTACTTGATAGAGGAAGTGAGAAACTGAGCGCCCTTTCTCGGTTCGGCA
 
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JMFF030F08+           TGTTTGCAGGTTGCCTTCCGCTC                                     
JMSF006M04+           TGTTTGCAGGTTGCCTTCCGCTCACAGCCTCACCTGAATATCCATTGCGCAATTAGAACC
                      ____________________________________________________________
consensus             TGTTTGCAGGTTGCCTTCCGCTCACAGCCTCACCTGAATATCCATTGCGCAATTAGAACC