Contig 010570:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS122E09+                                                    CCCCATAATTTCAACTGGA
                      ____________________________________________________________
consensus                                                      CCCCATAATTTCAACTGGA
 
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JMFS122E09+           ACTCCCTCTCCAAATCAGCTCTCAGCTGTAATCCCAAATAAGAAACAACAGTCTCTCTAC
                      ____________________________________________________________
consensus             ACTCCCTCTCCAAATCAGCTCTCAGCTGTAATCCCAAATAAGAAACAACAGTCTCTCTAC
 
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JMFS122E09+           AAATATAAGTACCTAATTTGTAGTCAAAGTATAAATCTAGAATCCCCTTCTCCTCCTATA
                      ____________________________________________________________
consensus             AAATATAAGTACCTAATTTGTAGTCAAAGTATAAATCTAGAATCCCCTTCTCCTCCTATA
 
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JMFS122E09+           GCCATTGCTAGCTCCCTGCATCTACTTCCATTTTTCCCTTCAAATGTAAGGGAAACCAAA
JMFS094D11+                                                           AGGGAAACCAAA
                      ____________________________________________________________
consensus             GCCATTGCTAGCTCCCTGCATCTACTTCCATTTTTCCCTTCAAATGTAAGGGAAACCAAA
 
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JMFS122E09+           ACCCAAAACACAATCCTTCTCCAAATTAACGTAAAGATTTACTCAATCGTGAGTTCTTCA
JMFS094D11+           ACCCAAAACACAATCCTTCTCCAAATTAACGTAAAGATTTACTCAATCGTGAGTTCTTCA
                      ____________________________________________________________
consensus             ACCCAAAACACAATCCTTCTCCAAATTAACGTAAAGATTTACTCAATCGTGAGTTCTTCA
 
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JMFS122E09+           CAGCTTCTCTCAAGCAAACATCCAAAATTTGTACTCAAATCCTAGTAATTTACAGGTAAT
JMSF025H23+                    TCAAGCAAACATNCAAAATTTGTACTCAAATCCTAGTAATTTNCNGGTAAT
JMFS094D11+           CAGCTTCTCTCAAGCAAACATCCAAAATTTGTACTCAAATCCTAGTAATTTACAGGTAAT
                      ____________________________________________________________
consensus             CAGCTTCTCTCAAGCAAACATCCAAAATTTGTACTCAAATCCTAGTAATTTACAGGTAAT
 
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JMFS122E09+           CAGAAGTTATTAGCACCAACCACCAAGACATCAACTTTTGTGCACAATAAATTTCCTTCC
JMFF018O05+                                          CAACTTTTGTGCNCAATAAATTTCCTTCC
JMSF025H23+           CNGAAGTTNTTAGCCCCNACCCCCNAGNCATCAACTTTTGTGCNCAATAAATTTCCTTCC
JMFS094D11+           CAGAAGTTATTAGCACCAACCACCAAGACATCAACTTTTGTGCACAATAAATTTCCTTCC
                      ____________________________________________________________
consensus             CAGAAGTTATTAGCACCAACCACCAAGACATCAACTTTTGTGCACAATAAATTTCCTTCC
 
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JMFS122E09+           AACAAGATCCTTCAAAGAAAAATGGTCGATTTTGCCTCTACATTCAACCAGTCATAAACA
JMFF018O05+           AACAAGATCCTTCAAAGAAAAATGGTCGATTTTGCCTTTACATTCAACCNGTCATAAACN
JMSF025H23+           AACNAGNTCCTTCAAAGAAAAATGGTNGNTTTTGCCTTTACNTTCAACCNGTCATAAACN
JMFS094D11+           AACAAGATCCTTCAAAGAAAAATGGTCGATTTTGCCTCTACATTCAACCAGTCATAAACA
                      ____________________________________________________________
consensus             AACAAGATCCTTCAAAGAAAAATGGTCGATTTTGCCTTTACATTCAACCAGTCATAAACA
 
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JMFS122E09+           GAAGCAAAAATTCAAGATACCCAGACAACAAAATCAAATCTTTATTTTTTTTTTCATTAT
JMFF018O05+           GAAGCAAAAATTCAAGATNCCCNGNCAACAAAATCAAATNTTTATTTTTTTTTTCATTAT
JMSF025H23+           GNAGCAAAAATTCNAGNTNCCCNGNCAACAAAATCAAATNTTTATTTTTTTTTTCATTAT
JMFS094D11+           GAAGCAAAAATTCAAGATACCCAGACAACAAAATCAAATCTTTATTTTTTTTTTCATTAT
JMSF051J05+                                                       TTTTTTTTTTCNTTAT
                      ____________________________________________________________
consensus             GAAGCAAAAATTCAAGATACCCAGACAACAAAATCAAATCTTTATTTTTTTTTTCATTAT
 
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JMFS122E09+           ATAGAGGACAACATACAACAGAACTTGGTAAAAGCCATGGCAACAAACAATCAATGGAAA
JMFF018O05+           ATAGAGGACAACATACAACAGAACTTGGTAAAAGCCATGGCAACAAACAATCAATGGAAA
JMSF025H23+           ATAGNGGNCAACATACAACAGAACTTGGTAAAAGCCATGGCAACAAACAATCAATGGAAA
JMFS094D11+           ATAGAGGACAACATACAACAGAACTTGGTAAAAGCCATGGCAACAAACAATCAATGGAAA
JMSF051J05+           ATAGAGGNCAACATACAACAGAACTTGGTAAAAGCCCTGGCAACAANCAATCAATGGAAA
                      ____________________________________________________________
consensus             ATAGAGGACAACATACAACAGAACTTGGTAAAAGCCATGGCAACAAACAATCAATGGAAA
 
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JMFF018O05+           CCCATTACCTTGAGCTCCCAAGAAAGTAAATGCCAACNCAGATNTATCCAAGAAGAAAAT
JMSF025H23+           CCCATTACCTTGAGCTCCCA--AAAGTAAATGCCAACNCAGATCTATCCAAGAAGAAAAT
JMFS094D11+           CCCATTACCTTGAGCTCCCAAGAAAGTAAATGCCAACACAGATCTATCCAAGAAGAAAAT
JMSF051J05+           CCCNTTNCCTTGAGCTCCCNAGAAAGTAAATGCCAACACAGATCTATCCAAGAAGAAAAT
                      ____________________________________________________________
consensus             CCCATTACCTTGAGCTCCCAAGAAAGTAAATGCCAACACAGATCTATCCAAGAAGAAAAT
 
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JMFF018O05+           GCAACAGGAGAAAATTCCAAAATGCAAGAGATTGCGACGAAACTACC-AAAAAAAAAATT
JMSF025H23+           GCAACAGGNGAAAATTCCAAAATGCAAGNGATTGNGACGAAACTACC-AAAAAAAAAATT
JMFS094D11+           GCAACAGGAGAAAATTCCAAAATGCAAGAGATTGCGACGAAACTACCAAAAAAAAAAATT
JMSF051J05+           GCAACAGGNGAAAATTCCAAAATGCAAGNGATTGCGNNGNANCTNCC-AAAAAAAAAATT
JMSF005P20+                                                        CC-AAAAAAAAAATT
                      ____________________________________________________________
consensus             GCAACAGGAGAAAATTCCAAAATGCAAGAGATTGCGACGAAACTACC-AAAAAAAAAATT
 
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JMFF018O05+           AAAAGGGGGGAAATTAAATGTGAAGGAGTTGCAACTAAAACTACTGTAACCGCTTTATTA
JMSF025H23+           AAAAGGGGGGAAATTAAATGTGAAGGAGTTGCAACTAAAAC                   
JMFS094D11+           AAAAGGGGGGAAATTAAATGTGAAGGAGTTGCAACTAAAACTACTGTAACCGCTTTATTA
JMSF051J05+           AAAAGGGGGGAAATTAAATGTGAAGGAGTTGCAACTAAAACTACTGTAACCGCTTTATTA
JMSF005P20+           AAAAGGGGGGAAATTAAATGTGAAGGAGTTGCAACTAAAACTACTGTAACCGCTTTATTA
                      ____________________________________________________________
consensus             AAAAGGGGGGAAATTAAATGTGAAGGAGTTGCAACTAAAACTACTGTAACCGCTTTATTA
 
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JMFF018O05+           TTATCCTTTATTATGGAGAGGGAAATGCAGGGAGAAAGAGCAAGAGAGAGAAGAGA    
JMFS094D11+           TTATCCTTTATTATGGAGAGGGAAATGCAGGGAGAAAGAGCAAGAGAGAGAAGAGAGAGA
JMSF051J05+           TTATCCTTTATTATGGAGAGGGAAATGCAGGGAGAAAGAGCAAGAGAGAGAAGAGAGAGA
JMSF005P20+           TTATCCTTTATTATGGAGAGGGAAATGCAGGGAGAAAGAGCAAGAGAGAGAAGAGAGAGA
                      ____________________________________________________________
consensus             TTATCCTTTATTATGGAGAGGGAAATGCAGGGAGAAAGAGCAAGAGAGAGAAGAGAGAGA
 
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JMFS094D11+           GAGAGAGAGAGAAGA                                             
JMSF051J05+           GAGAGAGAGAGAAGAGGCACTGAGGCAGATGTCTTGC                       
JMSF005P20+           GAGAGAGAGAGAAGAGGCACTGAGGCAGATGTCTTGCAGGCCTTTCCTCACACTTCCATC
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consensus             GAGAGAGAGAGAAGAGGCACTGAGGCAGATGTCTTGCAGGCCTTTCCTCACACTTCCATC