Contig 010569:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021J05Sequence504010569 (5)ref|XP_009616762.1|89.4PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]
JMSF005C09Sequence243010569 (5)126003955 (67)gb|KJB54393.1|1e-16hypothetical protein B456_009G074800 [Gossypium raimondii]
JMSF024K03Sequence691010569 (5)ref|XP_009616762.1|198PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]789011414 (4)ref|XP_010096275.1|3e-78hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p
JMSF031C02Sequence599010569 (5)ref|XP_009800283.1|130PREDICTED: uncharacterized protein LOC104246216 [Nicotiana sylvestris]702011414 (4)ref|XP_010096275.1|2e-61hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p
JMSF045B16Sequence755010569 (5)ref|XP_009616762.1|222PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]715011414 (4)ref|XP_010096275.1|8e-50hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p

Alignment

This contig is upended


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JMSF045B16+                                                                     TN
                      ____________________________________________________________
consensus                                                                       TN
 
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JMSF024K03+                                                     CACTTGCATTCCCTTGGC
JMSF045B16+           TGATATTAGAAGATCCATGGTCTCTTTACCCAGTTGCTCAAGCACTTGCATTCCCTTGGC
                      ____________________________________________________________
consensus             TGATATTAGAAGATCCATGGTCTCTTTACCCAGTTGCTCAAGCACTTGCATTCCCTTGGC
 
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JMSF024K03+           AGTAAAAGCTTTTCCTGTCTCCAGAATGGATGGCGCACCAGAACCAGTTTCCCCAGGTAA
JMSF045B16+           AGTAAAAGCTTTTCCTGTCTCCAGAATGGATGGCGCACCAGAACCAGTTTCCCCAGGTAA
                      ____________________________________________________________
consensus             AGTAAAAGCTTTTCCTGTCTCCAGAATGGATGGCGCACCAGAACCAGTTTCCCCAGGTAA
 
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JMSF024K03+           GCCACCTTGCTGAATGGATTCCTCAAGCTTGTGAACAAAACTAGAACCCCCTTTCAATGC
JMSF031C02+                                          TGAACAAAACTAGAACCCCCTTTCAATGC
JMSF045B16+           GCCACCTTGCTGAATGGATTCCTCAAGCTTGTGAACAAAACTAGAACCCCCTTTCAATGC
                      ____________________________________________________________
consensus             GCCACCTTGCTGAATGGATTCCTCAAGCTTGTGAACAAAACTAGAACCCCCTTTCAATGC
 
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JMSF024K03+           ATTTCCTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAACTGAATTGTCAATGACCTT
JMSF031C02+           ATTTCNTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAANTGAATTGTCAATGACCTT
JMSF045B16+           ATTTCCTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAACTGAATTGTCAATGACCTT
                      ____________________________________________________________
consensus             ATTTCCTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAACTGAATTGTCAATGACCTT
 
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JMSF024K03+           CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
JMSF031C02+           CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTNTAATTTATCCAAAGCCTCCNT
JMFF021J05+                  TGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
JMSF045B16+           CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
                      ____________________________________________________________
consensus             CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
 
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JMSF024K03+           GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
JMSF031C02+           GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
JMFF021J05+           GCGTCGTTTGTCATTCTCACCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
JMSF045B16+           GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
                      ____________________________________________________________
consensus             GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
 
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JMSF024K03+           CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
JMSF031C02+           CTCGTTAGCAGATTCAGACTCCTCAANTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
JMFF021J05+           CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
JMSF045B16+           CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
                      ____________________________________________________________
consensus             CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
 
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JMSF024K03+           TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
JMSF031C02+           TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
JMFF021J05+           TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
JMSF045B16+           TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
                      ____________________________________________________________
consensus             TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
 
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JMSF024K03+           CTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
JMSF031C02+           NTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
JMFF021J05+           CTGAAGGTCGGAGAGATAAGAGAAAGCGG-GAACCACCACCCACCCCATCCACCGCCAGC
JMSF045B16+           CTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
                      ____________________________________________________________
consensus             CTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
 
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JMSF024K03+           ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMSF031C02+           ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMFF021J05+           ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMSF045B16+           ACGGCTGCTATCCTGCGCAGATGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMSF005C09+                                                                    CTC
                      ____________________________________________________________
consensus             ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
 
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JMSF024K03+           CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMSF031C02+           CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMFF021J05+           CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMSF045B16+           CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMSF005C09+           CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
                      ____________________________________________________________
consensus             CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
 
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JMSF024K03+           TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMSF031C02+           TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMFF021J05+           TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMSF045B16+           TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMSF005C09+           TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
                      ____________________________________________________________
consensus             TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
 
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JMSF024K03+           CAGATCGCCC                                                  
JMSF031C02+           CAGATCGCCCTGCTTCTCGGTGAAGATCC                               
JMFF021J05+           CAGATCGCCCTGCTTCTCGGTGAAGATCC                               
JMSF045B16+           CAGATCGCCCTGCTTCTCGGTGAAGATCC                               
JMSF005C09+           CAGATCGCCCTGCTTCTCGGTGAAGATCCAATGCCACCTCAAATTCAGTGGTTGGGTTTA
                      ____________________________________________________________
consensus             CAGATCGCCCTGCTTCTCGGTGAAGATCCAATGCCACCTCAAATTCAGTGGTTGGGTTTA
 
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JMSF005C09+           CCTACCGATCTGGTAAGACTTGTCCTTGACGGCAAAAGGATTCGAAACGAAACGACGTCC
                      ____________________________________________________________
consensus             CCTACCGATCTGGTAAGACTTGTCCTTGACGGCAAAAGGATTCGAAACGAAACGACGTCC