Contig 010566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004N02Sequence396010566 (3)ref|XP_009628073.1|2e-14PREDICTED: uncharacterized protein LOC104118522 isoform X1 [Nicotiana tomentosi332010357 (4)
JMSF018I17Sequence481010566 (3)ref|XP_004242883.1|187PREDICTED: uncharacterized protein LOC101254006 [Solanum lycopersicum] ref|XP_01813004386 (2)ref|XP_009628075.1|3e-93PREDICTED: uncharacterized protein LOC104118522 isoform X3 [Nicotiana tomentosi
JMSF045I15Sequence802010566 (3)ref|XP_009628073.1|6e-117PREDICTED: uncharacterized protein LOC104118522 isoform X1 [Nicotiana tomentosi709004386 (2)ref|XP_009628075.1|8e-75PREDICTED: uncharacterized protein LOC104118522 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF045I15+                                       TCAACAATAACTGGGATTTCATGAGAATGACA
                      ____________________________________________________________
consensus                                         TCAACAATAACTGGGATTTCATGAGAATGACA
 
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JMSF045I15+           CAATAGAGCAATCTCGCTCAAGTTGTTGCATATGCCATGATAAGTAGGGGAGACAACTAA
                      ____________________________________________________________
consensus             CAATAGAGCAATCTCGCTCAAGTTGTTGCATATGCCATGATAAGTAGGGGAGACAACTAA
 
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JMSF045I15+           AACGGCTGCAGGTTTCTGGCCTTCCCTTTCTAGTTCCTCGATTGCCCTTTTCACTTGCAT
                      ____________________________________________________________
consensus             AACGGCTGCAGGTTTCTGGCCTTCCCTTTCTAGTTCCTCGATTGCCCTTTTCACTTGCAT
 
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JMSF045I15+           GGGAGTGATGCCACCAGCAACATCCCAATCAGAATCATATTCAGGGACGATGTACTTCGG
                      ____________________________________________________________
consensus             GGGAGTGATGCCACCAGCAACATCCCAATCAGAATCATATTCAGGGACGATGTACTTCGG
 
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JMSF045I15+           AAGGGCACCAGACAATACCATGGCAGATATGGCTGAGATATGAGAGTTTCGCGGTAGAAT
                      ____________________________________________________________
consensus             AAGGGCACCAGACAATACCATGGCAGATATGGCTGAGATATGAGAGTTTCGCGGTAGAAT
 
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JMSF018I17+                                                               GTACTGCC
JMSF045I15+           TATGGTGTCTCCTGGTGAACAAGTAGCCATAATTGCTGCCTGAACACCACACGTACTGCC
                      ____________________________________________________________
consensus             TATGGTGTCTCCTGGTGAACAAGTAGCCATAATTGCTGCCTGAACACCACACGTACTGCC
 
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JMSF018I17+           ACCAACAAGAAACCATGTTTCCAACGCTCCAAAAAGTTGTGCAGCTTGTTTTTGTGCTTC
JMSF045I15+           ACCAACAAGAAACCATGTTTCCAACGCTCCAAAAAGTTGTGCAGCTTGTTTTTGTGCTTC
                      ____________________________________________________________
consensus             ACCAACAAGAAACCATGTTTCCAACGCTCCAAAAAGTTGTGCAGCTTGTTTTTGTGCTTC
 
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JMSF018I17+           CAAAATGGGCCCTTCTGGAGCAAAGAGGTTGTCCAGCTCTGGAAGCTCAGGCAAATCATG
JMSF045I15+           CAAAATGGGCCCTTCTGGAGCAAAGAGGTTGTCCAGCTCTGGAAGCTCAGGCAAATCATG
                      ____________________________________________________________
consensus             CAAAATGGGCCCTTCTGGAGCAAAGAGGTTGTCCAGCTCTGGAAGCTCAGGCAAATCATG
 
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JMSF018I17+           TACAAAAGGTCTTGAACCAATGAGACGCGACAACGATGAAGGTGCCGCATGGCCTCTGTT
JMSF045I15+           TACAAAAGGTCTTGAACCAATGAGACGCGACAACGATGAAGGTGCCGCATGGCCTCTGTT
JMSF004N02+                               TGAGACGCGACAACGATGAAGGTGCCGCATGGCCTCTGTT
                      ____________________________________________________________
consensus             TACAAAAGGTCTTGAACCAATGAGACGCGACAACGATGAAGGTGCCGCATGGCCTCTGTT
 
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JMSF018I17+           ATGCCCGGGGAAATGAAAAGTTGCAGCTTTTTCTTCAGCTGAAGCTTTCAAAGCCCTAAC
JMSF045I15+           ATGCCCGGGGAAATGAAAAGTTGCAGCTTTTTCTTCAGCTGAAGCTTTCAAAGCCCTAAC
JMSF004N02+           ATGCCCGGGGAAATGAAAAGTTGCAGCTTTTTCTTCAGCTGAAGCTTTCAAAGCCCTAAC
                      ____________________________________________________________
consensus             ATGCCCGGGGAAATGAAAAGTTGCAGCTTTTTCTTCAGCTGAAGCTTTCAAAGCCCTAAC
 
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JMSF018I17+           TAATGGTGGAAGCTCAGCAGCAGAATAAATATCTTTTGTGAAAACTGGATTTCTTTCAAT
JMSF045I15+           TAATGGTGGAAGCTCAGCAGCAGAATAAATATCTTTTGTGAAAACTGGATTTCTTTCAAT
JMSF004N02+           TAATGGTGGAAGCTCAGCAGCAGAATAAATATCTTTTGTGAAAACTGGATTTCTTTCAAT
                      ____________________________________________________________
consensus             TAATGGTGGAAGCTCAGCAGCAGAATAAATATCTTTTGTGAAAACTGGATTTCTTTCAAT
 
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JMSF018I17+           TGTGCTAGTTTGGTTTTGCTTTTCTCCAACCACTGTGTTTCTCCTTCCTACTTGGGAAAC
JMSF045I15+           TGTGCTAGTTTGGTTTTGCTTTTCTCCAACCACTGTGTTTC-CTTT----CTTGGGAAAC
JMSF004N02+           TGTGCTAGTTTGGTTTTGCTTTTCTCCAACCACTGTGTTTCTCCTT----CTTGGGAAAC
                      ____________________________________________________________
consensus             TGTGCTAGTTTGGTTTTGCTTTTCTCCAACCACTGTGTTTCTCCTT----CTTGGGAAAC
 
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JMSF018I17+           ACAAGAAGTTGGTCTTCTGCTCCGCCTATTCTGCCCAAATTTCACCAGAGGGCTC     
JMSF045I15+           ACAAGAAGTTGGTCTTCTGCTCCGCCTATTCTGCCCAAATTTCACCAGAGGGCTC     
JMSF004N02+           ACAAGAAGTTGGTCTTCTGCTCCGCCTATTCTGCCCAAATTTCACCAGAGGGCTCTGCAA
                      ____________________________________________________________
consensus             ACAAGAAGTTGGTCTTCTGCTCCGCCTATTCTGCCCAAATTTCACCAGAGGGCTCTGCAA
 
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JMSF004N02+           ACAATAACAAATAAATTACTTCTTACTCCACAACTCTTTGTTCAAGATTTTTCTTCTTCT
                      ____________________________________________________________
consensus             ACAATAACAAATAAATTACTTCTTACTCCACAACTCTTTGTTCAAGATTTTTCTTCTTCT
 
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JMSF004N02+           AAATTTTCTTGAAATTTCATTTGCTCTATAAATAATATCATGTAGTCTTACCATATCCCC
                      ____________________________________________________________
consensus             AAATTTTCTTGAAATTTCATTTGCTCTATAAATAATATCATGTAGTCTTACCATATCCCC