Contig 010563:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF004I17-                                                      ATCTCAATACAGAATC
rJMSF038E17-                                      ACATGGTTTACAATAAATCTCAATACAAAATC
                      ____________________________________________________________
consensus                                         ACATGGTTTACAATAAATCTCAATACAGAATC
 
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rJMSF004I17-          ATCATCATCATCATCATCATCATCTCTCCAAATAAACTCATTTGGAGAAACAAAATTCTG
rJMSF038E17-          ATCATCATCATCATCATCATCATCTCTCCAAATAAACTCATTTGGAGAAACAAAATTCTG
                      ____________________________________________________________
consensus             ATCATCATCATCATCATCATCATCTCTCCAAATAAACTCATTTGGAGAAACAAAATTCTG
 
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rJMSF004I17-          AACATAGGAACACATAGCGGCAGTATGATTTCTCTGTCCTGATTCTGCTTTCAAGAAATT
rJMSF038E17-          AACATAGGAACACATAGCGGCAGTATGATTTCTCTGTCCTGATTCTGCTTTCAAGAAATT
                      ____________________________________________________________
consensus             AACATAGGAACACATAGCGGCAGTATGATTTCTCTGTCCTGATTCTGCTTTCAAGAAATT
 
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rJMSF004I17-          CTCCAGCTTCACATTATAAACTAATGCTCCCCACCAACCATACAAACAGCTCCCTATCAG
rJMSF038E17-          CTCCAGCTTCACATTATAAACTAATGCTCCCCACCAACCATACAAACAGCTCCCTATCAG
                      ____________________________________________________________
consensus             CTCCAGCTTCACATTATAAACTAATGCTCCCCACCAACCATACAAACAGCTCCCTATCAG
 
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rJMSF004I17-          GGCTTGTGTATTGCATTTGGAAGGGTAGAATGTAAAGTCACTATGATAACCAGATCTGAA
rJMSF038E17-          GGCTTGTGTATTGCATTTGGAAGGGTAGAATGTAAAGTCACTATGATAACCAGATCTGAA
                      ____________________________________________________________
consensus             GGCTTGTGTATTGCATTTGGAAGGGTAGAATGTAAAGTCACTATGATAACCAGATCTGAA
 
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rJMSF004I17-          CTGAGAGGCATTGATCACAAACTGACTCATCCATGAATTCTTCACTCCATATTCCTTCAT
rJMSF038E17-          CTGAGAGGCATTGATCACAAACTGACTCATCCATGAATTCTTCACTCCATATTCCTTCAT
                      ____________________________________________________________
consensus             CTGAGAGGCATTGATCACAAACTGACTCATCCATGAATTCTTCACTCCATATTCCTTCAT
 
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rJMSF004I17-          NACCAACACTTCAACCGTTTCCTTCGTCCT                              
rJMSF038E17-          AACCAACACTTCAACCGTTTCCTTCGTCCTCTCGCGAGCCAGGCAGAGATAACGACTGTC
                      ____________________________________________________________
consensus             AACCAACACTTCAACCGTTTCCTTCGTCCTCTCGCGAGCCAGGCAGAGATAACGACTGTC
 
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rJMSF038E17-          AATGATTCCCAACCCAAAAATTGCACAACTTTCCACCGGAAAACTGGGGGTGGGCAGCTC
                      ____________________________________________________________
consensus             AATGATTCCCAACCCAAAAATTGCACAACTTTCCACCGGAAAACTGGGGGTGGGCAGCTC
 
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rJMSF038E17-          TTTGAATTCATCGCTCACCGCATCAAAATAAACCACCTTTTTGCATCTCTCTGAGGAAGA
JMSF038E17+                                                            TCTGAGGAAGA
                      ____________________________________________________________
consensus             TTTGAATTCATCGCTCACCGCATCAAAATAAACCACCTTTTTGCATCTCTCTGAGGAAGA
 
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rJMSF038E17-          CCAATCCCTAGCAGATTGAGCTACCCTCCAATGGAGTGTGTTGTGAAAGTTAACCCCGCC
JMSF038E17+           CCAATCCCTAGCAGATTGAGCTACCCTCCAATGGAGTGTGTTGTGAAAGTTAACCCCGCC
                      ____________________________________________________________
consensus             CCAATCCCTAGCAGATTGAGCTACCCTCCAATGGAGTGTGTTGTGAAAGTTAACCCCGCC
 
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rJMSF038E17-          GTCTCTAACGGACTCTGCACAGTGGGGAAACAACACCCTTCGCCACTCTTTGTTCTTGAG
JMSF038E17+           GTCTCTAACGGACTCTGCACAGTGGGGAAACAACACCCTTCGCCACTCTTTGTTCTTGAG
                      ____________________________________________________________
consensus             GTCTCTAACGGACTCTGCACAGTGGGGAAACAACACCCTTCGCCACTCTTTGTTCTTGAG
 
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rJMSF038E17-          GCTTGCAACGAGAACAGTTCCATCATCATCATCGAGTAACAGAACCACCTTGTAATCTCC
JMSF038E17+           GCTTGCAACGAGAACAGTTCCATCATCATCATCGAGTAACAGAACCACCTTGTAATCTCC
                      ____________________________________________________________
consensus             GCTTGCAACGAGAACAGTTCCATCATCATCATCGAGTAACAGAACCACCTTGTAATCTCC
 
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rJMSF038E17-          CGTGGACGGGACATAACAGAGCCCTGAGGCAGAGACCACATTATGACGATGCCACATAGA
JMSF038E17+           CGTGGACGGGACATAACAGAGCCCTGAGGCAGAGACCACATTATGACGATGCCACATAGA
                      ____________________________________________________________
consensus             CGTGGACGGGACATAACAGAGCCCTGAGGCAGAGACCACATTATGACGATGCCACATAGA
 
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rJMSF038E17-          AGGCTTCAATAGTTGCAGCTCAAGCACTTTTGTGCAGCAGCGAGTGGAGGGATTCCACAA
JMSF038E17+           AGGCTTCAATAGTTGCAGCTCAAGCACTTTTGTGCAGCAGCGAGTGGAGGGATTCCACAA
                      ____________________________________________________________
consensus             AGGCTTCAATAGTTGCAGCTCAAGCACTTTTGTGCAGCAGCGAGTGGAGGGATTCCACAA
 
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rJMSF038E17-          CAGAATATGTTTCCACACGGAGAAAAGCACGAGGCCGTTGCAAGAACACCAAACGCCGGA
JMSF038E17+           CAGAATATGTTTCCACACGGAGAAAAGCACGAGGCCGTTGCAAGAACACCAAACGCCGGA
                      ____________________________________________________________
consensus             CAGAATATGTTTCCACACGGAGAAAAGCACGAGGCCGTTGCAAGAACACCAAACGCCGGA
 
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rJMSF038E17-          CCACCAACCGCCCTCTTCCGCTCCCCGCC                               
JMSF038E17+           CCACCAACCGCCCTCTTCCGCTCCCCGCCGATTGAATAGCGTTTTGATGCAGAGAGTGTC
                      ____________________________________________________________
consensus             CCACCAACCGCCCTCTTCCGCTCCCCGCCGATTGAATAGCGTTTTGATGCAGAGAGTGTC
 
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JMSF038E17+           GGTCGTTATGGATGTAAAGGCTAAGCCGCCGCCGGACGCCGCCGCCACAAGCACTCGCCG
                      ____________________________________________________________
consensus             GGTCGTTATGGATGTAAAGGCTAAGCCGCCGCCGGACGCCGCCGCCACAAGCACTCGCCG
 
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JMSF038E17+           TCCTCCGCGGTAGGAGAGCTTGAAATCGGGGTCTTCTATTGTGGATCGCCATTCTTTGCA
JMSF004K19+                                            TTCTATTGTGGATCGCCATTCTTNGCA
                      ____________________________________________________________
consensus             TCCTCCGCGGTAGGAGAGCTTGAAATCGGGGTCTTCTATTGTGGATCGCCATTCTTTGCA
 
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JMSF038E17+           TACGCCTTCACATCGGATCAGAGCTTTCATCTCCAATTTCAAAAGTATACAGCGAATTAT
JMSF004K19+           TACGCCTTCACATCGGATCAGAGCTTTCATCTCCAATTTCAAAAGTATACAGCGAATTAT
                      ____________________________________________________________
consensus             TACGCCTTCACATCGGATCAGAGCTTTCATCTCCAATTTCAAAAGTATACAGCGAATTAT
 
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JMSF038E17+           CTCAATCGGTACGTGCGGCAGCGATCGAGCTTTCTTTGC                     
JMSF004K19+           CTCAATCGGTATGTGCGGCAGCGATCGAGCTTTCTTTGCGGCTGAAACTTCCATGGTGAT
                      ____________________________________________________________
consensus             CTCAATCGGTATGTGCGGCAGCGATCGAGCTTTCTTTGCGGCTGAAACTTCCATGGTGAT
 
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JMSF004K19+           CCAATAATTATATCGATGAGAATGAATGAATGAATGCAGCTACTTAGTTGAGAGGATCGA
                      ____________________________________________________________
consensus             CCAATAATTATATCGATGAGAATGAATGAATGAATGCAGCTACTTAGTTGAGAGGATCGA
 
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JMSF004K19+           TCGGAAATTTATTAGCTAGGGTTCACCCGTTTTCCGATTGGAATTGAATCAATACTCATT
                      ____________________________________________________________
consensus             TCGGAAATTTATTAGCTAGGGTTCACCCGTTTTCCGATTGGAATTGAATCAATACTCATT
 
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JMSF004K19+           ATATACATAATAAATAAATCATATAAAATTCTCCTGATTCGGCTTGGATCAGGAATGACC
                      ____________________________________________________________
consensus             ATATACATAATAAATAAATCATATAAAATTCTCCTGATTCGGCTTGGATCAGGAATGACC