Contig 010562:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004E04Sequence357010562 (2)emb|CDP02770.1|5e-12unnamed protein product [Coffea canephora]196018109
JMSF005E04Sequence273010562 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF004E04+ TTTCGCGAAAAACACAGAAATCGAAATCCANGCTGGACGAGGAGGAGCTGGAGCGAA
                      ____________________________________________________________
consensus TTTCGCGAAAAACACAGAAATCGAAATCCANGCTGGACGAGGAGGAGCTGGAGCGAA
 
. : . : . : . : . : . :
JMSF005E04+ CTTGAGAAATGTCGTGAGAGAAAGATATCCTGG
JMSF004E04+ CGTATTGCTCGACCGGGACGATTTCGGCTTGAGAAATGTCNTGAGAGAAAGATATCCTGG
                      ____________________________________________________________
consensus CGTATTGCTCGACCGGGACGATTTCGGCTTGAGAAATGTCGTGAGAGAAAGATATCCTGG
 
. : . : . : . : . : . :
JMSF005E04+ GACTCNGACCCANACTCGGATCCTCGGAACAAAGTTCCATCGCCANTATTTCTTAAGGTG
JMSF004E04+ GACTCAGACCCAAACTCGGATCCTCGGAACAAAGTTCCATCGCCANTATTTCTTAAGGTG
                      ____________________________________________________________
consensus GACTCAGACCCAAACTCGGATCCTCGGAACAAAGTTCCATCGCCANTATTTCTTAAGGTG
 
. : . : . : . : . : . :
JMSF005E04+ TNGAAAACTNGGATTTAAGAAATTAAAGCAAACTACTTGGGACTTGGGAGTGGTGATATG
JMSF004E04+ TAGAAAACTNGGATTTAAGAAATTAAAGCAAACTACTTGGGACTTGGGAGTGGTGATATG
                      ____________________________________________________________
consensus TAGAAAACTNGGATTTAAGAAATTAAAGCAAACTACTTGGGACTTGGGAGTGGTGATATG
 
. : . : . : . : . : . :
JMSF005E04+ AAGGANGACANGCTTCAATCNNGCACTCGTGTATTTGTGTGTCACAGAGAGAGAGAGAGA
JMSF004E04+ AAGGATGACANGCTTCANTCCNGCACTCGTGTATTTGTGTGTCACAGAGAGAGAGAGAGA
                      ____________________________________________________________
consensus AAGGATGACANGCTTCAATCCNGCACTCGTGTATTTGTGTGTCACAGAGAGAGAGAGAGA
 
. : . : . : . : . : . :
JMSF005E04+ GAGAGAGAGAGGGTGGTGGGCTGATTAATATACATACATATACTACAAATCTAGAACCTC
JMSF004E04+ GAGAGAGAGAGGGTGGTGGGCTGATTAATATACATACATATACTACAAATCTAGAACCTC
                      ____________________________________________________________
consensus GAGAGAGAGAGGGTGGTGGGCTGATTAATATACATACATATACTACAAATCTAGAACCTC