Contig 010548:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036O05Sequence770010548 (2)
JMSF002H05Sequence374010548 (2)emb|CDP20378.1|2e-15unnamed protein product [Coffea canephora]796020274ref|XP_011093116.1|4e-66PREDICTED: protein BPS1, chloroplastic-like [Sesamum indicum] ref|XP_011093118.1

Alignment

This contig is upended


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JMFN036O05+                                              CCCCCCCCCCCCCTCTTTTTTTTTT
                      ____________________________________________________________
consensus                                                CCCCCCCCCCCCCTCTTTTTTTTTT
 
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JMFN036O05+           TTTTTCCCCGCGGTGTGTTTTTTAATAAAAAAAAAAAAAAACCCCCCCCCTTTGTTTTTT
                      ____________________________________________________________
consensus             TTTTTCCCCGCGGTGTGTTTTTTAATAAAAAAAAAAAAAAACCCCCCCCCTTTGTTTTTT
 
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JMFN036O05+           TTTTTTTTCTCXXXXXXXXXXXXXXXXXXXXXXGGGGGGGGGGGGCGCAAAAAAAACACC
                      ____________________________________________________________
consensus             TTTTTTTTCTCNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGCGCAAAAAAAACACC
 
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JMFN036O05+           ACCCCAACCNGGGGCGCGGTTTTTTTTTTGAAAAAAAACCCGGGGGGGGAAAAAAAAAAA
                      ____________________________________________________________
consensus             ACCCCAACCNGGGGCGCGGTTTTTTTTTTGAAAAAAAACCCGGGGGGGGAAAAAAAAAAA
 
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JMFN036O05+           AAAATTTCTTTTTTTTGTGGTGTTAAAAAAAAGATTTTCCCCCCACAAAAGAGGGGGGGC
                      ____________________________________________________________
consensus             AAAATTTCTTTTTTTTGTGGTGTTAAAAAAAAGATTTTCCCCCCACAAAAGAGGGGGGGC
 
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JMFN036O05+           AACAAAATTTTTCCCCCCCCCCTCTGTTTAACAACACAAAAAAAAAAAAAAACCCCTGTG
                      ____________________________________________________________
consensus             AACAAAATTTTTCCCCCCCCCCTCTGTTTAACAACACAAAAAAAAAAAAAAACCCCTGTG
 
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JMFN036O05+           GGCCCCCTAATTTTTTGGGGGGAAGGGGGGAAAAAAACCCCAACCCCCCCCCCCCTTTTT
                      ____________________________________________________________
consensus             GGCCCCCTAATTTTTTGGGGGGAAGGGGGGAAAAAAACCCCAACCCCCCCCCCCCTTTTT
 
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JMFN036O05+           TTAAAAAAAAACAAACACTTTTTTTTTTCCCACAAATTTTTGGGAAAATCAACACCCAAA
                      ____________________________________________________________
consensus             TTAAAAAAAAACAAACACTTTTTTTTTTCCCACAAATTTTTGGGAAAATCAACACCCAAA
 
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JMFN036O05+           AAAAAAGTCTTTTTTTTTTGAAAAAAAACGGAAAATGCCCCAAATGCCATTTTCTTCCCC
                      ____________________________________________________________
consensus             AAAAAAGTCTTTTTTTTTTGAAAAAAAACGGAAAATGCCCCAAATGCCATTTTCTTCCCC
 
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JMFN036O05+           AAAAAAATGAAACAATTTTCTCCCTACCCAAGGCCCCAATTTTTTGGATTTTTTTTCCCC
                      ____________________________________________________________
consensus             AAAAAAATGAAACAATTTTCTCCCTACCCAAGGCCCCAATTTTTTGGATTTTTTTTCCCC
 
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JMFN036O05+           CCGGTTCCTTGAAAATTTTCCATTAGAGAAAAAAACCTTTAAAACAAGGTTGGACCTTAA
                      ____________________________________________________________
consensus             CCGGTTCCTTGAAAATTTTCCATTAGAGAAAAAAACCTTTAAAACAAGGTTGGACCTTAA
 
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JMFN036O05+           GAAATATCTTCTCGAAAGGGGTTTCTGGACGACTCATTTTTAATATTCAGAAAAGATTCA
JMSF002H05+                                          ACTCATTTTTAATATACAGAAAAGATTCA
                      ____________________________________________________________
consensus             GAAATATCTTCTCGAAAGGGGTTTCTGGACGACTCATTTTTAATATTCAGAAAAGATTCA
 
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JMFN036O05+           AAAAAGCTTNAATTCCGAAGCCGATTCAGAGATTGAACGCCACAGAATTTAAGCAGATCA
JMSF002H05+           AAAAAGCTTTAAATCCGAAGCCGATTCAGAGATTGAACGCCACAGATTTTAAGCAGATCA
                      ____________________________________________________________
consensus             AAAAAGCTTTAATTCCGAAGCCGATTCAGAGATTGAACGCCACAGATTTTAAGCAGATCA
 
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JMFN036O05+           ACTGACCGAGTACCGAGTAGATAG                                    
JMSF002H05+           ACTGACCGAGTACCGAGTAGATAGAGAAAAGGAGGAATCTTCTTGGAATTTCACCCGCCA
                      ____________________________________________________________
consensus             ACTGACCGAGTACCGAGTAGATAGAGAAAAGGAGGAATCTTCTTGGAATTTCACCCGCCA