Contig 010547:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF022D22+                                                           GCCTTCAACCCC
JMSF047M12+                                                              TTCAACCCC
                      ____________________________________________________________
consensus                                                             GCCTTCAACCCC
 
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JMSF022D22+           CTTGAATACAAGAAATCCCACTAACCCTACAGCCACTATCAGATGCAGAAGAAACAGAAA
JMSF047M12+           CTTGAATACAAGAAATCCCACTAACCCTACAGCCACTATCAGATGCAGAAGAAACAGAAA
                      ____________________________________________________________
consensus             CTTGAATACAAGAAATCCCACTAACCCTACAGCCACTATCAGATGCAGAAGAAACAGAAA
 
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JMSF022D22+           CAGGGAAAACTTGTTTGTGTATGCTCTTGAATTCAGTGTTATCACTGCACGTTGTTGGGG
JMSF047M12+           CAGGGAAAACTTGTTTGTGTATGCTCTTGAATTCAGTGTTATCACTGCACGTTGTTGGGG
                      ____________________________________________________________
consensus             CAGGGAAAACTTGTTTGTGTATGCTCTTGAATTCAGTGTTATCACTGCACGTTGTTGGGG
 
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JMSF022D22+           AGTAACCGTGACGGTAGGGGTGGAGCGCGGCTGGGAAGAAGGGGGAGGAGAAGGAGAAGG
JMSF047M12+           AGTAACCGTGACGGTAGGGGTGGAGCGCGGCTGGGAAGAAGGGGGAGGAGAAGGAGAAGG
                      ____________________________________________________________
consensus             AGTAACCGTGACGGTAGGGGTGGAGCGCGGCTGGGAAGAAGGGGGAGGAGAAGGAGAAGG
 
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JMSF022D22+           TGAAATGTGAGGCGGCGGAGAGGGGGAAGGTTGTGGCGGCGGAGAAGGAGAAGGGATAGG
JMSF047M12+           TGAAATGTGAGGCGGCGGAGAGGGGGAAGGTTGTGGCGGCGGAGAAGGAGAAGGGATAGG
                      ____________________________________________________________
consensus             TGAAATGTGAGGCGGCGGAGAGGGGGAAGGTTGTGGCGGCGGAGAAGGAGAAGGGATAGG
 
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JMSF022D22+           AGGCTGGGAAGGAGAAGGGCGAGGCGGTTGAGGAGGAGGAGGATGAGAACGGCGAGGCGG
JMSF047M12+           AGGCTGGGAAGGAGAAGGGCGAGGCGGTTGAGGAGGAGGAGGATGAGAACGGAGAGGCGG
JMSF002F04+                                              GAGGAGGATGAGAACGGCGAGGCGG
                      ____________________________________________________________
consensus             AGGCTGGGAAGGAGAAGGGCGAGGCGGTTGAGGAGGAGGAGGATGAGAACGGCGAGGCGG
 
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JMSF022D22+           CTGAGGAGGAGAAGGTGAGGCAACTCTGATGGCACTTTCCATTACAAGCCGAAGAGGGTT
JMSF047M12+           CTGAGGAGGAGAAGGTGAGGCAACTCTGATGGCACTTTCCATTACAAGCCGAAGAGGGTT
JMSF002F04+           CTGAGGAGGAGAAGGTGAGGCAACTCTGATGGCACTTTCCATTACAAGCCGAAGAGGGTT
                      ____________________________________________________________
consensus             CTGAGGAGGAGAAGGTGAGGCAACTCTGATGGCACTTTCCATTACAAGCCGAAGAGGGTT
 
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JMSF022D22+           TGTAGCACTCAGCCTTTGCATTCTCCCCATGTGAAAACCATGACCGCCACCACCACCCGC
JMSF047M12+           TGTAGCACTCAGCCTTTGCATTCTCCCCATGTGAAAACCATGACCGCCACCACCACCCGC
JMSF002F04+           TGTAGCACTCAGCCTTTGCATTCTCCCCATGTGAAAACCATGACCGCCACCACCACCCGC
                      ____________________________________________________________
consensus             TGTAGCACTCAGCCTTTGCATTCTCCCCATGTGAAAACCATGACCGCCACCACCACCCGC
 
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JMSF022D22+           CGGCGCCGGCGGCGCCGGCGGGTAGTTGTAACTCCCTCCCGCCTGAAAACCCATCTCACC
JMSF047M12+           CGGCGCCGGCGGCGCCGGCGGGTAGTTGTAACTCCCTCCCGCCTGAAAACCCATCTCACC
JMSF002F04+           CGGCGCCGGCGGCGCCGGCGGGTAGTTGTAACTCCCTCCCGCCTGAAAACCCATCTCACC
                      ____________________________________________________________
consensus             CGGCGCCGGCGGCGCCGGCGGGTAGTTGTAACTCCCTCCCGCCTGAAAACCCATCTCACC
 
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JMSF022D22+           TCTCTCCACATCTCTCTGCCTCTCCTCCGCTTCTCTTTCATTATTCTCTCTCTCAACCAC
JMSF047M12+           TCTCTCCACATCTCTCTGCCTCTCCTCCGCTTCTCTTTCATTATTCTCTCTCTCAACCAC
JMSF002F04+           TCTCTCCACATCTCTCTGCCTCTCCTCCGCTTCTCTTTCATTATTCTCTCTCTCAACCAC
                      ____________________________________________________________
consensus             TCTCTCCACATCTCTCTGCCTCTCCTCCGCTTCTCTTTCATTATTCTCTCTCTCAACCAC
 
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JMSF022D22+           AGGTTCCGAGGCGCCCATTGACGGTGGATCGAGGCGGCGCGTGGAGGTGATGAGGAGGAG
JMSF047M12+           AGGTTCCGAGGCGCCCATTGACGGTGGATCGAGGCGGCGCGTGGAGGTGATGAGGAGGAG
JMSF002F04+           AGGTTCCGAGGCGCCCATTGACGGTGGATCGAGGCGGCGCGTGGAGGTGATGAGGAGGAG
                      ____________________________________________________________
consensus             AGGTTCCGAGGCGCCCATTGACGGTGGATCGAGGCGGCGCGTGGAGGTGATGAGGAGGAG
 
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JMSF022D22+           AGTTAAGATTTTGTTGGTATGTGGTGGCTGATGTTCAAACGTTGCC              
JMSF047M12+           AGTTAAGATTTTGTTGGTATGTGGTGGCTGATGTTCAAACGTTGCCAGCAGGC       
JMSF002F04+           AGTTAAGATTTTGTTGGTATGTGGTGGCTGATGTTCAAACGTTGCCAGCAGGCATCACCC
                      ____________________________________________________________
consensus             AGTTAAGATTTTGTTGGTATGTGGTGGCTGATGTTCAAACGTTGCCAGCAGGCATCACCC