Contig 010541:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN019B07Sequence627010541 (5)ref|XP_009377058.1|3e-90PREDICTED: glycine cleavage system H protein 3, mitochondrial-like isoform X1 [
JMFN033C15Sequence625010541 (5)ref|XP_009377058.1|3e-90PREDICTED: glycine cleavage system H protein 3, mitochondrial-like isoform X1 [
JMFN035O02Sequence626010541 (5)ref|XP_009762877.1|3e-79PREDICTED: glycine cleavage system H protein, mitochondrial [Nicotiana sylvestr
JMFN040G22Sequence642010541 (5)ref|XP_009377058.1|3e-90PREDICTED: glycine cleavage system H protein 3, mitochondrial-like isoform X1 [
JMSF001K09Sequence419010541 (5)ref|XP_006436758.1|3e-53hypothetical protein CICLE_v10032942mg [Citrus clementina] gb|ESR49998.1| hypoth

Alignment

This contig is upended


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JMFN040G22+                                                                    ACC
                      ____________________________________________________________
consensus                                                                      ACC
 
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JMFN040G22+           AAATGTGATGATTNTGATGATTGTAGAAATTTGAATAACTGAGATACATTGTACAGACAT
JMFN035O02+                                  TAGAAATTTGAATAACTGAGATACATTGTACAGACAT
                      ____________________________________________________________
consensus             AAATGTGATGATTNTGATGATTGTAGAAATTTGAATAACTGAGATACATTGTACAGACAT
 
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JMFN040G22+           GCATGGTGTATATATATATATATATCAACCATGAAACTAAGGCAGGGCAGTTAGTGGAAG
JMFN035O02+           GCATGGTGTATATATATATATATATCAACCATGAAACTAAGGCAGGGCAGTTAGTGGAAG
JMFN033C15+                   TATATATATATATATATCAACCATGAAACTAAGGCAGGGCAGTTAGTGGAAG
JMFN019B07+                   TATATATATATATATATCAACCATGAAACTAAGGCAGGGCAGTTAGTGGAAG
                      ____________________________________________________________
consensus             GCATGGTGTATATATATATATATATCAACCATGAAACTAAGGCAGGGCAGTTAGTGGAAG
 
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JMFN040G22+           TAGAATCTCAGTGATCTTCTTCTTCACAAAACTTGGTGTACTCTTTTGGGTCCA--TCAG
JMFN035O02+           TAGAATCTCAGTGATCTTCTTCTTCACAAAACTTGGTGTACTCTTTTGGGTCCATCTCAG
JMFN033C15+           TAGAATCTCAGTGATCTTCTTCTTCACAAAACTTGGTGTACTCTTTTGGGTCCA--TCAG
JMFN019B07+           TAGAATCTCAGTGATCTTCTTCTTCACAAAACTTGGTGTACTCTTTTGGGTCCA--TCAG
                      ____________________________________________________________
consensus             TAGAATCTCAGTGATCTTCTTCTTCACAAAACTTGGTGTACTCTTTTGGGTCCA--TCAG
 
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JMFN040G22+           GGATCCCAGTTCTGATGCATTGCTTGGTTTTACCTTGATCATCCATCCATCCTCATATGG
JMFN035O02+           GGATCCCAGTTCTGATGCATTGCTTGGTTTTACCTTGATCATCCATCCATCCTCATATGG
JMFN033C15+           GGATCCCAGTTCTGATGCATTGCTTGGTTTTACCTTGATCATCCATCCATCCTCATATGG
JMFN019B07+           GGATCCCAGTTCTGATGCATTGCTTGGTTTTACCTTGATCATCCATCCATCCTCATATGG
                      ____________________________________________________________
consensus             GGATCCCAGTTCTGATGCATTGCTTGGTTTTACCTTGATCATCCATCCATCCTCATATGG
 
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JMFN040G22+           GCTCGAATTGATCACTCCGGGTCCCTCGGTGAGCTTAGCATTGACCTCCACAACCTCCCC
JMFN035O02+           GCTCGAATTGATCACTCCGGGTCCCTCGGTGAGCTTAGCATTGACCTCCACAACCTCCCC
JMFN033C15+           GCTCGAATTGATCACTCCGGGTCCCTCGGTGAGCTTAGCATTGACCTCCACAACCTCCCC
JMFN019B07+           GCTCGAATTGATCACTCCGGGTCCCTCGGTGAGCTTAGCATTGACCTCCACAACCTCCCC
                      ____________________________________________________________
consensus             GCTCGAATTGATCACTCCGGGTCCCTCGGTGAGCTTAGCATTGACCTCCACAACCTCCCC
 
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JMFN040G22+           TGAGATTGGAGAGTTCACATCACTTGTGGCTTTCACACTCTCCACAGCCCCAAAACCGCT
JMFN035O02+           TGAGATTGGAGAGTTCACATCACTTGTGGCTTTCACACTCTCCACAGCCCCAAAACCGCT
JMFN033C15+           TGAGATTGGAGAGTTCACATCACTTGTGGCTTTCACACTCTCCACAGCCCCAAAACCGCT
JMFN019B07+           TGAGATTGGAGAGTTCACATCACTTGTGGCTTTCACACTCTCCACAGCCCCAAAACCGCT
JMSF001K09+            GAGATTGGAGAGTTCACATCACTTGTGGCTTTCACACTCTCCACAGCCCCAAAACCGCT
                      ____________________________________________________________
consensus             TGAGATTGGAGAGTTCACATCACTTGTGGCTTTCACACTCTCCACAGCCCCAAAACCGCT
 
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JMFN040G22+           GCCTTGTTTAACAGCAGTACCCACTTCTGGCAGCTCCACAAACACCACTTCTCCAAGGTG
JMFN035O02+           GCCTTGTTTAACAGCAGTACCCACTTCTGGCAGCTCCACAAACACCACTTCTCCAAGGTG
JMFN033C15+           GCCTTGTTTAACAGCAGTACCCACTTCTGGCAGCTCCACAAACACCACTTCTCCAAGGTG
JMFN019B07+           GCCTTGTTTAACAGCAGTACCCACTTCTGGCAGCTCCACAAACACCACTTCTCCAAGGTG
JMSF001K09+           GCCTTGTTTAACAGCAGTACCCACTTCTGGCAGCTCCACAAACACCACTTCTCCAAGGTG
                      ____________________________________________________________
consensus             GCCTTGTTTAACAGCAGTACCCACTTCTGGCAGCTCCACAAACACCACTTCTCCAAGGTG
 
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JMFN040G22+           GTCCTGAGCATGATCAGTGATGCCAATGGTGGCAACGGAGCCCTCACTCTTCACCCATTC
JMFN035O02+           GTCCTGAGCATGATCAGTGATGCCAATGGTGGCAACGGAGCCCTCACTCTTCACCCATTC
JMFN033C15+           GTCCTGAGCATGATCAGTGATGCCAATGGTGGCAACGGAGCCCTCACTCTTCACCCATTC
JMFN019B07+           GTCCTGAGCATGATCAGTGATGCCAATGGTGGCAACGGAGCCCTCACTCTTCACCCATTC
JMSF001K09+           GTCCTGAGCATGATCAGTGATGCCAATGGTGGCAACGGAGCCCTCACTCTTCACCCATTC
                      ____________________________________________________________
consensus             GTCCTGAGCATGATCAGTGATGCCAATGGTGGCAACGGAGCCCTCACTCTTCACCCATTC
 
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JMFN040G22+           ATGTGACTTTGCATATTTTAGCCCCTCCAACACAGAAGAAAAGCATCTGGAGAGGGAGAG
JMFN035O02+           ATGTGACTTTGCATATTTTAGCCCCTCCAACACAGAAGAAAAGCATCTGGAGAGGGAGAG
JMFN033C15+           ATGTGACTTTGCATATTTTAGCCCCTCCAACACAGAAGAAAAGCATCTGGAGAGGGAGAG
JMFN019B07+           ATGTGACTTTGCATATTTTAGCCCCTCCAACACAGAAGAAAAGCATCTGGAGAGGGAGAG
JMSF001K09+           ATGTGACTTTGCATATTTTAGCCCCTCCAACACAGAAGAAAAGCATCTGGAGAGGGAGAG
                      ____________________________________________________________
consensus             ATGTGACTTTGCATATTTTAGCCCCTCCAACACAGAAGAAAAGCATCTGGAGAGGGAGAG
 
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JMFN040G22+           ATTAGGCTTGGAGGAAGCTGCAGTGGAGAGTCTCAATGCATTGGCTGTGGAAGAAGCCCA
JMFN035O02+           ATTAGGCTTGGAGGAAGCTGCAGTGGAGAGTCTCAATGCATTGGCTGTGGAAGAAGCCCA
JMFN033C15+           ATTAGGCTTGGAGGAAGCTGCAGTGGAGAGTCTCAATGCATTGGCTGTGGAAGAAGCCCA
JMFN019B07+           ATTAGGCTTGGAGGAAGCTGCAGTGGAGAGTCTCAATGCATTGGCTGTGGAAGAAGCCCA
JMSF001K09+           ATTAGGCTTGGAGGAAGCTGCAGTGGAGAGTCTCAATGCATTGGCTGTGGAAGAAGCCCA
                      ____________________________________________________________
consensus             ATTAGGCTTGGAGGAAGCTGCAGTGGAGAGTCTCAATGCATTGGCTGTGGAAGAAGCCCA
 
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JMFN040G22+           GATTCTGAGAGCCATTGTTTTGCAGCTTTAACTTCACACTC                   
JMFN035O02+           GATTCTGAGAGCCATTGTTTTGCAGCTTTAACTTCACACTCTTATTATC           
JMFN033C15+           GATTCTGAGAGCCATTGTTTTGCAGCTTTAACTTCACACTCTTATTATCCCTGCAGGGCT
JMFN019B07+           GATTCTGAGAGCCATTGTTTTGCAGCTTTAACTTCACACTCTTATTATCCCTGCAGGGCT
JMSF001K09+           GATTCTGAGAGCCATTGTTTTGCAGCTTTAACTTCACACTCTTATTATCCCTGCAGGGCT
                      ____________________________________________________________
consensus             GATTCTGAGAGCCATTGTTTTGCAGCTTTAACTTCACACTCTTATTATCCCTGCAGGGCT
 
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JMFN033C15+           TAGTTTGAGGAGACAAAGGGATAGCTACAAGAAT                          
JMFN019B07+           TAGTTTGAGGAGACAAAGGGATAGCTACAAGAAT                          
JMSF001K09+           TAGTTTGAGGAGACAAAGGGATAGCTACAAGAATGAGAAGATTATAATGGGGATAAAGGC
                      ____________________________________________________________
consensus             TAGTTTGAGGAGACAAAGGGATAGCTACAAGAATGAGAAGATTATAATGGGGATAAAGGC