Contig 010537:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001E22Sequence344010537 (3)ref|XP_006353595.1|1e-43PREDICTED: tubulin-folding cofactor E-like [Solanum tuberosum]177005774 (3)ref|XP_009606625.1|3e-08PREDICTED: tubulin-folding cofactor E isoform X1 [Nicotiana tomentosiformis]
JMSF039B24Sequence693010537 (3)ref|XP_010313057.1|2e-112PREDICTED: tubulin-folding cofactor E isoform X2 [Solanum lycopersicum]825005774 (3)ref|XP_009606626.1|3e-96PREDICTED: tubulin-folding cofactor E isoform X2 [Nicotiana tomentosiformis]
JMSF049M22Sequence369010537 (3)ref|XP_010313057.1|1e-56PREDICTED: tubulin-folding cofactor E isoform X2 [Solanum lycopersicum]178005774 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF049M22+ AAACTAAAATCCGTATATTATTTAGCAAG
JMSF039B24+ GTATGGTTCAAAACTAAAATCCGTATATTATTTAGCAAG
                      ____________________________________________________________
consensus GTATGGTTCAAAACTAAAATCCGTATATTATTTAGCAAG
 
. : . : . : . : . : . :
JMSF049M22+ GGCATTCCACTTATATCATGTGCCATAATATTGTGTGATAGGTTCAGAGCTGCAAGACCT
JMSF039B24+ GGCATTCCACTTATATCATGTGCCATAATATTGTGTGATAGGTTCAGAGCTGCAAGACCT
                      ____________________________________________________________
consensus GGCATTCCACTTATATCATGTGCCATAATATTGTGTGATAGGTTCAGAGCTGCAAGACCT
 
. : . : . : . : . : . :
JMSF049M22+ GGCAACTCTTTACAGATTATACCAACCTCCTCCCACTCAGATAGCAGGTTCCCAGTCAAA
JMSF039B24+ GGCAACTCTTTACAGATTATACCAACCTCCTCCCACTCAGATAGCAGGTTCCCAGTCAAA
                      ____________________________________________________________
consensus GGCAACTCTTTACAGATTATACCAACCTCCTCCCACTCAGATAGCAGGTTCCCAGTCAAA
 
. : . : . : . : . : . :
JMSF049M22+ TCAAGCTCCTTTAAATTTGGTATAGTTGTACTAATGTGGCATGGATCTCCGGCAGAGCTG
JMSF039B24+ TCAAGCTCCTTTAAATTTGGTATAGTTGTACTAATGTGGCATGGATCTCCGGCAGAGCTG
                      ____________________________________________________________
consensus TCAAGCTCCTTTAAATTTGGTATAGTTGTACTAATGTGGCATGGATCTCCGGCAGAGCTG
 
. : . : . : . : . : . :
JMSF049M22+ ACTCCTAAATAAGACAATGATGCACTTGTCAACTCCTCAAAATGACTCAGCTTATTCTGA
JMSF039B24+ ACTCCTAAATAAGACAATGATGCACTTGTCAACTCCTCAAAATGACTCAGCTTATTCTGA
                      ____________________________________________________________
consensus ACTCCTAAATAAGACAATGATGCACTTGTCAACTCCTCAAAATGACTCAGCTTATTCTGA
 
. : . : . : . : . : . :
JMSF049M22+ ATCTTTTCTTTACCCAGAAGCTCAACAGTTACTCGTTTGTTGCTTGCAGAGAAAACATAC
JMSF039B24+ ATCTTTTCTTTACCCAGAAGCTCAACAGTTACTCGTTTGTTGCTTGCAGAGAAAACATAC
                      ____________________________________________________________
consensus ATCTTTTCTTTACCCAGAAGCTCAACAGTTACTCGTTTGTTGCTTGCAGAGAAAACATAC
 
. : . : . : . : . : . :
JMSF049M22+ ATCTCATCCTCTTCTTCTTTACTGGAAGCCGTACGGTACC
JMSF039B24+ ATCTCATCCTCTTCTTCTTTACTGGAAGCCGTACGGTACCGGAGCTCGAGCGCCTGCAAG
JMSF001E22+ CTTTACTGGAAGCCGTACGGTACCGGAGCTCGAGCGCCTGCAAG
                      ____________________________________________________________
consensus ATCTCATCCTCTTCTTCTTTACTGGAAGCCGTACGGTACCGGAGCTCGAGCGCCTGCAAG
 
. : . : . : . : . : . :
JMSF039B24+ AGCGGAATGCCGACGCTGAGATTGTGCGGTCGCACAAACGACGCCGTTGTATTGCCGGCA
JMSF001E22+ AGCGGAATGCCGACGCTGAGATTGTGCGGTCGCACAAACGACGCCGTTGTATTGCCGGCA
                      ____________________________________________________________
consensus AGCGGAATGCCGACGCTGAGATTGTGCGGTCGCACAAACGACGCCGTTGTATTGCCGGCA
 
. : . : . : . : . : . :
JMSF039B24+ GCTTCGAAGTATCGGACACCGTTGTGGCAGCCATCATGCTTCCCGTCCCCGTTGTCCCAG
JMSF001E22+ GCTTCGAAGTATCGGACACCGTTGTGGCAGCCATCATGCTTCCCGTCCCCGTTGTCCCAG
                      ____________________________________________________________
consensus GCTTCGAAGTATCGGACACCGTTGTGGCAGCCATCATGCTTCCCGTCCCCGTTGTCCCAG
 
. : . : . : . : . : . :
JMSF039B24+ TCAACTCCGATCCACGTGCCGGAGTATCCCTCCACCGGTCCGACGTATTTCACGCTGCCG
JMSF001E22+ TCAACTCCGATCCACGTGCCGGAGTATCCCTCCACCGGTCCGACGTATTTCACGCTGCCG
                      ____________________________________________________________
consensus TCAACTCCGATCCACGTGCCGGAGTATCCCTCCACCGGTCCGACGTATTTCACGCTGCCG
 
. : . : . : . : . : . :
JMSF039B24+ ATCCGGCGGGAGTCTCCGGCGTAGTGGACTCGTTGCCTGACCCGGAATCCGGACCCGTGC
JMSF001E22+ ATCCGGCGGGAGTCTCCGGCGTAGTGGACTCGTTGCCTGACCCGGAATCCGGACCCGTGC
                      ____________________________________________________________
consensus ATCCGGCGGGAGTCTCCGGCGTAGTGGACTCGTTGCCTGACCCGGAATCCGGACCCGTGC
 
. : . : . : . : . : . :
JMSF039B24+ CCGGATTCTCTTGTATCGGATCTCTCGGAATCCATTGCGCTTTGAATCTTGCC
JMSF001E22+ CCGGATTCTCTTGTATCGGATCTCTCGGAATCCATTGCGCTTTGAATCTTGCCAGTACTC
                      ____________________________________________________________
consensus CCGGATTCTCTTGTATCGGATCTCTCGGAATCCATTGCGCTTTGAATCTTGCCAGTACTC