clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF008K03 | Sequence | 467 | 010531 (9) | gb|KDP44148.1| | 7e-23 | hypothetical protein JCGZ_05615 [Jatropha curcas] | |||||
JMFF023E20 | Sequence | 466 | 010531 (9) | gb|KDP44148.1| | 1e-22 | hypothetical protein JCGZ_05615 [Jatropha curcas] | |||||
JMFF038J24 | Sequence | 376 | 010531 (9) | gb|KDP44148.1| | 2e-12 | hypothetical protein JCGZ_05615 [Jatropha curcas] | |||||
JMFS029E02 | Sequence | 634 | 010531 (9) | ref|XP_006365149.1| | 4e-77 | PREDICTED: LOW QUALITY PROTEIN: phototropin-1-like [Solanum tuberosum] | |||||
JMFS081C05 | Sequence | 619 | 010531 (9) | ref|NP_001234214.1| | 8e-60 | phototropin-1 [Solanum lycopersicum] gb|ABN42185.2| phototropin-1 [Solanum lycop | |||||
JMFS133D06 | Sequence | 611 | 010531 (9) | ref|NP_001234214.1| | 2e-45 | phototropin-1 [Solanum lycopersicum] gb|ABN42185.2| phototropin-1 [Solanum lycop | |||||
JMFS136D04 | Sequence | 610 | 010531 (9) | ref|NP_001234214.1| | 7e-47 | phototropin-1 [Solanum lycopersicum] gb|ABN42185.2| phototropin-1 [Solanum lycop | |||||
JMFS164D05 | Sequence | 535 | 010531 (9) | gb|KDP44148.1| | 2e-12 | hypothetical protein JCGZ_05615 [Jatropha curcas] | |||||
JMSF023L08 | Sequence | 644 | 010531 (9) | gb|KDP44148.1| | 3e-38 | hypothetical protein JCGZ_05615 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
JMFS029E02+ TTGTAATTGAGTAGCCTTCCACAATAACTTGAACCCGAATGTANAGC
JMFS081C05+ TGTAAAGC
____________________________________________________________
consensus TTGTAATTGAGTAGCCTTCCACAATAACTTGAACCCGAATGTAAAGC
. : . : . : . : . : . :
JMFS029E02+ TTCCCGGATCCTGGCCACGTCCTCTGGATCTGTGTCCGCACCTTGCAAGAACCGACTATT
JMFS081C05+ TTCCCGGATCCTGGCCACGTCCTCTGGATCTGTGTCCGCACC-TGCAAGAACCGACTATT
____________________________________________________________
consensus TTCCCGGATCCTGGCCACGTCCTCTGGATCTGTGTCCGCACCTTGCAAGAACCGACTATT
. : . : . : . : . : . :
JMFS029E02+ CCTGCCGATGACTTCCTTGGAGGAGTAACCGGTCATCTTGAAAAAGCCGGCACTGGCGTA
JMFS081C05+ CCTGCCGATGACTTCCTTGGAGGAGTAACCGGTCATCTTGAAAAAGCCGGCACTGGCGTA
____________________________________________________________
consensus CCTGCCGATGACTTCCTTGGAGGAGTAACCGGTCATCTTGAAAAAGCCGGCACTGGCGTA
. : . : . : . : . : . :
JMFS029E02+ CATAATCGGGTAATCGGGTTTGGTTGCATCCGACACCACGAATGTTTGTTGAAATGTGGA
JMFS081C05+ CATAATCGGGTAATCGGGTTTGGTTGCATCCGACACCACGAATGTTTGTTGAAATGTGGA
JMFS133D06+ GTTGAAATGTGGA
JMFS136D04+ ATGTTTGTTGAAATGTGGA
JMSF023L08+ CCGACACCACGAATGTTTGTTGAAATGTGGA
____________________________________________________________
consensus CATAATCGGGTAATCGGGTTTGGTTGCATCCGACACCACGAATGTTTGTTGAAATGTGGA
. : . : . : . : . : . :
JMFS029E02+ TAACGCATCCCTCAAATCCTCTGAGATTCTTGGGATTCCTTTTTCTTTTCCGGTTCCATC
JMFS081C05+ TAACGCATCCCTCAAATCCTCTGAGATTCTTGGGATTCCTTTTTCTTTTCCGGTTCCATC
JMFS133D06+ TAACGCATCCCTCAAATCCTCTGAGATTCTTGGGATTCCTTTTTCTTTTCCGGTTCCATC
JMFS136D04+ TAACGCATCCCTCAAATCCTCTGAGATTCTTGGGATTCCTTTTTCTTTTCCGGTTCCATC
JMSF023L08+ TAACGCATCCCTCAAATCCTCTGAGATTCTTGGGATTCCTTTTTCTTTTCCGGTTCCATC
____________________________________________________________
consensus TAACGCATCCCTCAAATCCTCTGAGATTCTTGGGATTCCTTTTTCTTTTCCGGTTCCATC
. : . : . : . : . : . :
JMFS029E02+ CTCGTACGTTTCACCGGAGCTTCGGACGGAGGTTCCGGAATCCCGTTTAGACCCCTCTTC
JMFS081C05+ CTCGTACGTTTCACCGGAGCTTCGGACGGAGGTTCCGGAATCCCGTTTAGACCCCTCTTC
JMFS133D06+ CTCGTACGTTTCACCGGAGCTTCGGACGGAGGTTCCGGAATCCCGTTTAGACCCCTCTTC
JMFS136D04+ CTCGTACGTTTCACCGGAGCTTCGGACGGAGGTTCCGGAATCCCGTTTAGACCCCTCTTC
JMSF023L08+ CTCGTACGTTTCACCGGAGCTTCGGACGGAGGTTCCGGAATCCCGTTTAGACCCCTCTTC
____________________________________________________________
consensus CTCGTACGTTTCACCGGAGCTTCGGACGGAGGTTCCGGAATCCCGTTTAGACCCCTCTTC
. : . : . : . : . : . :
JMFS029E02+ GCCGGAGGTTCTAACCTTAACCCCCTGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
JMFS081C05+ GCCGGAGGTTCTAACCTTAACCCCCTGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
JMFS133D06+ GCCGGAGGTTCTAACCTTAACCCCCTGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
JMFS136D04+ GCCGGAGGTTCTAACCTTAACCCCCTGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
JMFF023E20+ TGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
JMFF008K03+ CTGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
JMSF023L08+ GCCGGAGGTTCTAACCTTAACCCCCTGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
____________________________________________________________
consensus GCCGGAGGTTCTAACCTTAACCCCCTGAAGTTTACCAGTCTCGTCGTCTGTCTTCAACAC
. : . : . : . : . : . :
JMFS029E02+ CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
JMFS081C05+ CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
JMFS133D06+ CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
JMFS136D04+ CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
JMFF038J24+ GACGC
JMFF023E20+ CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
JMFF008K03+ CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
JMSF023L08+ CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
____________________________________________________________
consensus CAGTCCCCACTCCGCCGCCCTTTGAGCGGCGGTTCCGACCTCGTCCTTCACCGGGGACGC
. : . : . : . : . : . :
JMFS029E02+ CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMFS081C05+ CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMFS133D06+ CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMFS136D04+ CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMFF038J24+ CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMFF023E20+ CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMFF008K03+ CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMSF023L08+ CGAGAGTTGTGCCGGCGCCGGCGCCG--GGACTCGGGTCCTTGAGGGCCATCCACGACGT
JMFS164D05+ GTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
____________________________________________________________
consensus CGAGAGTTGTGCCGGCGCCGGCGCCGGCGGACTCGGGTCCTTGAGGGCCATCCACGACGT
. : . : . : . : . : . :
JMFS029E02+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMFS081C05+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMFS133D06+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMFS136D04+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMFF038J24+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMFF023E20+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMFF008K03+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMSF023L08+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
JMFS164D05+ GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
____________________________________________________________
consensus GATTTCCGCACCATTATTAGCTCTACCAGAAGTGCCGCCGGAGAAGACTTTGGGGTGTTC
. : . : . : . : . : . :
JMFS029E02+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCG
JMFS081C05+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
JMFS133D06+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
JMFS136D04+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
JMFF038J24+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
JMFF023E20+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
JMFF008K03+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
JMSF023L08+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
JMFS164D05+ CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
____________________________________________________________
consensus CAGTAATTCAGGACTACCGACTCTCGGCGGTGGCGGCGGCGGCGGCGGATCATCTTCCCA
. : . : . : . : . : . :
JMFS081C05+ GCTCTTCCACGA
JMFS133D06+ GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
JMFS136D04+ GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
JMFF038J24+ GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
JMFF023E20+ GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
JMFF008K03+ GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
JMSF023L08+ GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
JMFS164D05+ GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
____________________________________________________________
consensus GCTCTTCCACGACTGGAAAACCGGGCTGGCGGCGCGTGAAGAGAAGGTTGAGGGGTTGAA
. : . : . : . : . : . :
JMFS133D06+ GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
JMFS136D04+ GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
JMFF038J24+ GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
JMFF023E20+ GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
JMFF008K03+ GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
JMSF023L08+ GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
JMFS164D05+ GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
____________________________________________________________
consensus GACTTCGAGCGAGCCGCGGGAATCTCTCGGCAGTGGCGGCAGAATCGCTGATTTTTTGCC
. : . : . : . : . : . :
JMFS133D06+ TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTACATAAAC
JMFS136D04+ TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTA
JMFF038J24+ TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTACATAAACCA
JMFF023E20+ TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTACATAAACCA
JMFF008K03+ TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTACATAAACCA
JMSF023L08+ TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTACATAAACCA
JMFS164D05+ TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTACATAAACCA
____________________________________________________________
consensus TTGTTGTCCCTGGCCTGGCGACTCCATTATTTCTGCTTCCAACCAAATCTACATAAACCA
. : . : . : . : . : . :
JMFF038J24+ CACATTTATGC
JMFF023E20+ CACATTTATGC
JMFF008K03+ CACATTCATGC
JMSF023L08+ CACATTCATGC
JMFS164D05+ CACATTCATGCAATAAATTAAATATTCACCCATCTTATATATATACTTCCAAAGTACAAT
____________________________________________________________
consensus CACATTCATGCAATAAATTAAATATTCACCCATCTTATATATATACTTCCAAAGTACAAT
. : . : . : . : . : . :
JMFS164D05+ TAAAGACTTTCCATCTATAAAATCTAAAATTAAATCATATATTTTATCTCAATTAAAAAT
____________________________________________________________
consensus TAAAGACTTTCCATCTATAAAATCTAAAATTAAATCATATATTTTATCTCAATTAAAAAT
. : . : . : . : . : . :
JMFS164D05+ TTGAATGGATAACGAGAACATATATATTTTATATATTTTATATATTGAACGTTGGTTGAG
____________________________________________________________
consensus TTGAATGGATAACGAGAACATATATATTTTATATATTTTATATATTGAACGTTGGTTGAG