clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF019D05 | Sequence | 476 | 010527 (6) | ref|XP_010104289.1| | 1e-14 | Transcriptional corepressor SEUSS [Morus notabilis] gb|EXB99574.1| Transcription | 682 | 011040 (2) | ref|XP_009625647.1| | 7e-09 | PREDICTED: transcriptional corepressor SEUSS-like [Nicotiana tomentosiformis] |
JMFS015C09 | Sequence | 555 | 010527 (6) | ref|XP_010104289.1| | 2e-26 | Transcriptional corepressor SEUSS [Morus notabilis] gb|EXB99574.1| Transcription | |||||
JMFS059H02 | Sequence | 627 | 010527 (6) | ref|XP_009767968.1| | 4e-30 | PREDICTED: transcriptional corepressor SEUSS-like isoform X2 [Nicotiana sylvest | |||||
JMFS077B05 | Sequence | 688 | 010527 (6) | ref|XP_006356714.1| | 2e-40 | PREDICTED: transcriptional corepressor SEUSS-like [Solanum tuberosum] | |||||
JMFS155G10 | Sequence | 630 | 010527 (6) | gb|KDP43065.1| | 6e-29 | hypothetical protein JCGZ_25251 [Jatropha curcas] | |||||
JMSF048D08 | Sequence | 710 | 010527 (6) | ref|XP_002520244.1| | 5e-34 | Transcriptional corepressor SEUSS, putative [Ricinus communis] gb|EEF42030.1| Tr | 808 | 011040 (2) | ref|XP_009625647.1| | 5e-20 | PREDICTED: transcriptional corepressor SEUSS-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS059H02+ TCGGCGTGCACACATTCCAGGCTCATAATATGGTTTGNCTGGAGATCTTAAAGCCATA
____________________________________________________________
consensus TCGGCGTGCACACATTCCAGGCTCATAATATGGTTTGNCTGGAGATCTTAAAGCCATA
. : . : . : . : . : . :
JMFS059H02+ TTTGGTGGTTGATATTGTGGCTGAAGTGGATTTCTTTGTTGAGGCATTGCCTTCAAGAGC
____________________________________________________________
consensus TTTGGTGGTTGATATTGTGGCTGAAGTGGATTTCTTTGTTGAGGCATTGCCTTCAAGAGC
. : . : . : . : . : . :
JMFS059H02+ TGATGTTGCTGTTGCTGTTGCTGTTGGAACTGCATAAGTCTCTGTTGATGCAAAAGCTGG
____________________________________________________________
consensus TGATGTTGCTGTTGCTGTTGCTGTTGGAACTGCATAAGTCTCTGTTGATGCAAAAGCTGG
. : . : . : . : . : . :
JMFS059H02+ GCCATGGCAGCAGCTTGAGGGGAGGACCTAGACATTTGAAGTAATTGCTGCTGCTGCTGT
____________________________________________________________
consensus GCCATGGCAGCAGCTTGAGGGGAGGACCTAGACATTTGAAGTAATTGCTGCTGCTGCTGT
. : . : . : . : . : . :
JMFS059H02+ TGTTGCTGATGTTGATGCTGATGTTGCTGTATAAATAAGGAAGGGTCAGAATGCTGTGGT
____________________________________________________________
consensus TGTTGCTGATGTTGATGCTGATGTTGCTGTATAAATAAGGAAGGGTCAGAATGCTGTGGT
. : . : . : . : . : . :
JMFS059H02+ TCAATTTTGACAGGTGTCAGGCCTCTCATGTTCTGTAGCTGTTGTGGTTCCAGTTTCATT
____________________________________________________________
consensus TCAATTTTGACAGGTGTCAGGCCTCTCATGTTCTGTAGCTGTTGTGGTTCCAGTTTCATT
. : . : . : . : . : . :
JMFS059H02+ GTGGCAAGATTCCGTAAAGCTTGTAAGTGCTGGGGAGGTTGAGTAGACACCTGTGAGGCC
____________________________________________________________
consensus GTGGCAAGATTCCGTAAAGCTTGTAAGTGCTGGGGAGGTTGAGTAGACACCTGTGAGGCC
. : . : . : . : . : . :
JMFS059H02+ AAACCTCGAATGTTTTCTATCTGTTGTGGTTCCAATTTCACTGTTGTCAGGTTTTGCGAA
JMFS077B05+ AA
____________________________________________________________
consensus AAACCTCGAATGTTTTCTATCTGTTGTGGTTCCAATTTCACTGTTGTCAGGTTTTGCGAA
. : . : . : . : . : . :
JMFS059H02+ GCTTGCAGCTGTGGAATTTGATCATTGGTAACCTGTGGCTCTAGTTTAACAGAAGCAACA
JMFS077B05+ GCTTGCAGCTGTGGAATTGACTCATTGGTAACCTGTGGCTCTAGTTTAACAGAAGCAACA
____________________________________________________________
consensus GCTTGCAGCTGTGGAATTTGCTCATTGGTAACCTGTGGCTCTAGTTTAACAGAAGCAACA
. : . : . : . : . : . :
JMFS059H02+ CCTCCTAATCCACTTCGCATTGAATGAAATTGCTGCTGCTGTGTCTGGGAATTGTCAGGG
JMFS077B05+ CCTCCTAATCCACTTCGCATTGAATGAAATTGCTGCTGCTGTGTCTGGGAATTGTCAGGG
____________________________________________________________
consensus CCTCCTAATCCACTTCGCATTGAATGAAATTGCTGCTGCTGTGTCTGGGAATTGTCAGGG
. : . : . : . : . : . :
JMFS059H02+ GTAGAAAACTGTGGCAGCTGTTGATTATG
JMSF048D08+ TGGGTT
JMFS077B05+ GTAGAAAACTGTGGCAGCTGTTGATTATGCTGGAAGCTCTGGGGATCAAGCTGTTGGGTT
____________________________________________________________
consensus GTAGAAAACTGTGGCAGCTGTTGATTATGCTGGAAGCTCTGGGGATCAAGCTGTTGGGTT
. : . : . : . : . : . :
JMSF048D08+ TGTTGGTCTGTCAACATTTGGTTTCCAGAAGTATTAGTAAATTGTTGCCCCTGAACTTGA
JMFS077B05+ TGTTGGTCTGTCAACATTTGGTTTCCAGAAGTATTAGTAAATTGTTGCCCCTGAACTTGA
JMFS155G10+ AGTATTAGTAAATTGTTGCCCCTGAACTTGA
____________________________________________________________
consensus TGTTGGTCTGTCAACATTTGGTTTCCAGAAGTATTAGTAAATTGTTGCCCCTGAACTTGA
. : . : . : . : . : . :
JMSF048D08+ GCAGCTGAATTAGAATTTGTGGACATGGACACTGAAACAAATGATGAAGGCGGAGAATTA
JMFS077B05+ GCAGCTGAATTAGAATTTGTGGACATGGACACTGAAACAAATGATGAAGGCGGAGAATTA
JMFS155G10+ GCAGCTGAATTAGAATTTGTGGACATGGACACTGAAACAAATGATGAAGGCGGAGAATTA
____________________________________________________________
consensus GCAGCTGAATTAGAATTTGTGGACATGGACACTGAAACAAATGATGAAGGCGGAGAATTA
. : . : . : . : . : . :
JMFS015C09+ ATTTCCAACACTAGAAAGTGGATCAGATTCGGCCCCGTTGTCAATAAGA
JMSF048D08+ AATCCCATTCCATTTCCAACACTAGAAAGTGGATCAGATTCGGCCCCGTTGTCAATAAGA
JMFS077B05+ AATCCCATTCCATTTCCAACACTAGAAAGTGGATCAGATTCGGCCCCGTTGTCAATAAGA
JMFS155G10+ AATCCCATTCCATTTCCAACACTAGAAAGTGGATCAGATTCGGCCCCGTTGTCAATAAGA
____________________________________________________________
consensus AATCCCATTCCATTTCCAACACTAGAAAGTGGATCAGATTCGGCCCCGTTGTCAATAAGA
. : . : . : . : . : . :
JMFS015C09+ CCCCTCTGAGTATTCCCAGGATTAGGACCACCATTTCCAAAAGACTGATGGAGTAGAGAT
JMFF019D05+ TTTCCAAAAGACTGATGGAGTAGAGAT
JMSF048D08+ CCCCTCTGAGTATTCCCAGGATTAGGACCACCATTTCCAAAAGACTGATGGAGTAGAGAT
JMFS077B05+ CCCCTCTGAGTATTCCCAGGATTAGGACCACCATTTCCAAAAGACTGATGGAGTAGAGAT
JMFS155G10+ CCCCTCTGAGTATTCCCAGGATTAGGACCACCATTTCCAAAAGACTGATGGAGTAGAGAT
____________________________________________________________
consensus CCCCTCTGAGTATTCCCAGGATTAGGACCACCATTTCCAAAAGACTGATGGAGTAGAGAT
. : . : . : . : . : . :
JMFS015C09+ GTAACATTAGGACCATTCCCAAGCATATTCATGTTACCAAATTGTGTCCGTGGAGATGCC
JMFF019D05+ GTAACATTAGGACCATTCCCAAGCATATTCATGTTACCAAATTGTGTCCGTGGAGATGCC
JMSF048D08+ GTAACATTAGGACCATTCCCAAGCATATTCATGTTACCAAATTGTGTCCGTGGAGATGCC
JMFS077B05+ GTAACATTAGGACCATTCCCAAGCATATTCATGTTACCAAATTGTGTCCGTGGAGATGCC
JMFS155G10+ GTAACATTAGGACCATTCCCAAGCATATTCATGTTACCAAATTGTGTCCGTGGAGATGCC
____________________________________________________________
consensus GTAACATTAGGACCATTCCCAAGCATATTCATGTTACCAAATTGTGTCCGTGGAGATGCC
. : . : . : . : . : . :
JMFS015C09+ ATAGAGGGGAAACCACCCTGTGATGGCATAGCACCCCCCTGACCACCCAACATAGCAGAA
JMFF019D05+ ATAGAGGGGAAACCACCCTGTGATGGCATAGCACCCCCCTGACCACCCAACATAGCAGAA
JMSF048D08+ ATAGAGGGGAAACCACCCTGTGATGGCATAGCACCCCCCTGACCACCCAACATAGCAGAA
JMFS077B05+ ATAGAGGGGAAACCACCCTGTGATGGCATAGCACCCCCCTGACCACCCAACATAGCAGAA
JMFS155G10+ ATAGAGGGGAAACCACCCTGTGATGGCATAGCACCCCCCTGACCACCCAACATAGCAGAA
____________________________________________________________
consensus ATAGAGGGGAAACCACCCTGTGATGGCATAGCACCCCCCTGACCACCCAACATAGCAGAA
. : . : . : . : . : . :
JMFS015C09+ TTCGATCGCAGTAGTGAAGGTGGGACAGACTGGGAGTTACCAAGTGTATTAGAAG-CCCC
JMFF019D05+ TTCGATCGCAGTAGTGAAGGTGGGACAGACTGGGAGTTACCAAGTGTATTAGAAG-CCCC
JMSF048D08+ TTCGATCGCAGTAGTGAAGGTGGGACAGACTGGGAGTTACCAAGTGTATTAGAAG-CCCC
JMFS077B05+ TTCGATCGCAGTAGTGAAGGTGGGACAGACTGGGAGTTACCAAGTGTATTAGAAGNCCCC
JMFS155G10+ TTCGATCGCAGTAGTGAAGGTGGGACAGACTGGGAGTTACCAAGTGTATTAGAAG-CCCC
____________________________________________________________
consensus TTCGATCGCAGTAGTGAAGGTGGGACAGACTGGGAGTTACCAAGTGTATTAGAAG-CCCC
. : . : . : . : . : . :
JMFS015C09+ TCGCGGTACCATTTTCCTTACAAAAGCCGATTAACAGTCAACACCACAGCGTCGGAGCTC
JMFF019D05+ TCGCGGTACCATTTTCCTTACAAAAGCCGATTAACAGTCAACACCACAGCGTCGGAGCTC
JMSF048D08+ TCGCGGTACCATTTTCCTTACAAAAGCCGATTAACAGTCAACACCACAGCGTCGGAGCTC
JMFS077B05+ TCGCGGTACCATTTTCCTTACAAAAGCCGATTAACAGTCAACACCACAGCGTCGGAGCTC
JMFS155G10+ TCGCGGTACCATTTTCCTTACAAAAGCCGATTAACAGTCAACACCACAGCGTCGGAGCTC
____________________________________________________________
consensus TCGCGGTACCATTTTCCTTACAAAAGCCGATTAACAGTCAACACCACAGCGTCGGAGCTC
. : . : . : . : . : . :
JMFS015C09+ AACC
JMFF019D05+ AACC
JMSF048D08+ AACC
JMFS077B05+ AACCAATTGACAAGAATCAAAC
JMFS155G10+ AACCAATTGACAAGAATCAAACATACTACTACATTCACTTCTTTTCTCCTTTAACATTAG
____________________________________________________________
consensus AACCAATTGACAAGAATCAAACATACTACTACATTCACTTCTTTTCTCCTTTAACATTAG
. : . : . : . : . : . :
JMFS155G10+ TAACACAGATACTAGGAACATACGTATTTCTGTCATCTGTGTGCATACATGGATACAATA
____________________________________________________________
consensus TAACACAGATACTAGGAACATACGTATTTCTGTCATCTGTGTGCATACATGGATACAATA
. : . : . : . : . : . :
JMFS155G10+ ATATTTAATAAAATTATGAGTTTAAATGGAAGCTCTGAAGTTCAGTAAAGTCGTAGTCAC
____________________________________________________________
consensus ATATTTAATAAAATTATGAGTTTAAATGGAAGCTCTGAAGTTCAGTAAAGTCGTAGTCAC