Contig 010526:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040N13Sequence359023753gb|KDP28542.1|9e-12hypothetical protein JCGZ_14313 [Jatropha curcas]713010526 (3)gb|KDO86354.1|3e-69hypothetical protein CISIN_1g0016461mg, partial [Citrus sinensis]
JMFS005B06Sequence549010526 (3)gb|KDO86354.1|2e-38hypothetical protein CISIN_1g0016461mg, partial [Citrus sinensis]
JMFS154H01Sequence606010526 (3)ref|XP_009764569.1|332PREDICTED: uncharacterized protein LOC104216249 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF040N13-                                                             ATGAAGGAG
                      ____________________________________________________________
consensus                                                                ATGAAGGAG
 
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JMFS005B06+                                             TTTGAGAGTTCCCCCTAAACCACACC
rJMFF040N13-          CCTTTTAACCATTTACACAACTGTTTCGTTAGATTTTGAGAGTTCCCCCTAAACCACACC
                      ____________________________________________________________
consensus             CCTTTTAACCATTTACACAACTGTTTCGTTAGATTTTGAGAGTTCCCCCTAAACCACACC
 
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JMFS005B06+           CAAAAAAAATTATGAACAGACAGCACCAGAAGGATCGAGGATGTATCTACCTACAAGAAC
rJMFF040N13-          CAAAAAAAATTATGAACAGACAGCACCAGAAGGATCGAGGATGTATCTACCTACAAGAAC
                      ____________________________________________________________
consensus             CAAAAAAAATTATGAACAGACAGCACCAGAAGGATCGAGGATGTATCTACCTACAAGAAC
 
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JMFS005B06+           TAACAGAATATTTGGCCTAAGCATCCCTTGATTCCCTTCTTGCAAACGGGAATGAAAGAA
rJMFF040N13-          TAACAGAATATTTGGCCTAAGCATCCCTTGATTCCCTTCTTGCAAACGGGAATGAAAGAA
                      ____________________________________________________________
consensus             TAACAGAATATTTGGCCTAAGCATCCCTTGATTCCCTTCTTGCAAACGGGAATGAAAGAA
 
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JMFS005B06+           TGGCGGCAGGTAGTATTGGTGAAGTGAAAAATGTTAACTACTTTGTGAGATGGAATGTTA
rJMFF040N13-          TGGCGGCAGGTAGTATTGGTGAAGTGAAAAATGTTAACTACTTTGTGAGATGGAATGTTA
                      ____________________________________________________________
consensus             TGGCGGCAGGTAGTATTGGTGAAGTGAAAAATGTTAACTACTTTGTGAGATGGAATGTTA
 
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JMFS005B06+           CCTGGAAGCTATGCTGCAGCAGCTTGTGTTGAGTTAGAATTTTCTGTATTCTCGAGTAGA
rJMFF040N13-          CCTGGAAGCTATGCTGCAGCAGCTTGTGTTGAGTTAGAATTTTCTGTATTCTCGAGTAGA
                      ____________________________________________________________
consensus             CCTGGAAGCTATGCTGCAGCAGCTTGTGTTGAGTTAGAATTTTCTGTATTCTCGAGTAGA
 
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JMFS005B06+           GGCTTCACGTATTTCCCTAATGCTTTTTGGCGAGTCCGTTGTCTCATCCTAAAGAGCTTA
rJMFF040N13-          GGCTTCACGTATTTCCCTAATACTTTTTGGCGAGTCCGTTGTCTCATCCTAAAGAGCTTA
                      ____________________________________________________________
consensus             GGCTTCACGTATTTCCCTAATGCTTTTTGGCGAGTCCGTTGTCTCATCCTAAAGAGCTTA
 
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JMFS005B06+           TCTTTACTCTGTTGCTTCTTTATCTCTCTCTCTTTATTCCTTAGACTCCTCTCCTTCTCT
rJMFF040N13-          TCTTTACTCTGTTGCTTCTTTATCTCTCTCTCTTTATTCCTTAGACTCCTCTCCTTCTCT
                      ____________________________________________________________
consensus             TCTTTACTCTGTTGCTTCTTTATCTCTCTCTCTTTATTCCTTAGACTCCTCTCCTTCTCT
 
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JMFS005B06+           AAGATACCTTGCCAGAAAACTTCACCTGTGGCCGGCCATAGCCACCGCTTCTTCGGAGGG
rJMFF040N13-          AAGATACCTTGCCAGAAAACTTCACCTGTGGCCGGCCATAGCCACCGCTTCTTCGGAGGG
JMFS154H01+                                                                 GGAGGG
                      ____________________________________________________________
consensus             AAGATACCTTGCCAGAAAACTTCACCTGTGGCCGGCCATAGCCACCGCTTCTTCGGAGGG
 
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JMFS005B06+           TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
rJMFF040N13-          TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
JMFS154H01+           TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
                      ____________________________________________________________
consensus             TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
 
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JMFS005B06+           CACTTCACCCACATATGACC                                        
rJMFF040N13-          CACTTCACCCACATATGACCTCTCCGGCTCTTCAACTCGTGTCGTTCTTGCATCAAACCT
JMFS154H01+           CACTTCACCCACATATGACCTCTCCGGCTCTTCAACTCGTGTTGTTCTTGCATCAAACCT
                      ____________________________________________________________
consensus             CACTTCACCCACATATGACCTCTCCGGCTCTTCAACTCGTGTTGTTCTTGCATCAAACCT
 
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rJMFF040N13-          GTATTTGCGTCCACATATACCATTCTTCTAGCGCTATGGTACGCCCAAACGTTTATGAGC
JMFS154H01+           GTATTTGCGTCCACATATACCATTCTTCTAGCGCTATGGTACGCCCAAACGTTTATGAGC
                      ____________________________________________________________
consensus             GTATTTGCGTCCACATATACCATTCTTCTAGCGCTATGGTACGCCCAAACGTTTATGAGC
 
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rJMFF040N13-          AGCTCCAGCAGCCTCGAGTAGCAATGCTTGTCCTGCTGACTTAA                
JMFS154H01+           AGCTCCAGCAGCCTCGAGTAGCAATGCTTGTCCTGCTGACTTAAACTCAAGTAGCAATAT
                      ____________________________________________________________
consensus             AGCTCCAGCAGCCTCGAGTAGCAATGCTTGTCCTGCTGACTTAAACTCAAGTAGCAATAT
 
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JMFS154H01+           CCACTCTCATGGTGCTCGTCATAGAAGTGTGAGTCGAGTGCATCAACAAACATTCTTGAA
                      ____________________________________________________________
consensus             CCACTCTCATGGTGCTCGTCATAGAAGTGTGAGTCGAGTGCATCAACAAACATTCTTGAA
 
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JMFS154H01+           AACATTACGAACTCTAGGAAGGATCTTGTCGGTAAAACCCAACTATGCATGCGCGACCAA
                      ____________________________________________________________
consensus             AACATTACGAACTCTAGGAAGGATCTTGTCGGTAAAACCCAACTATGCATGCGCGACCAA
 
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JMFS154H01+           GTGCCTCCATCAACAGGCATTGGCGGAAGAGAGGTTAAATTCGGTTCAATGCCATACATC
                      ____________________________________________________________
consensus             GTGCCTCCATCAACAGGCATTGGCGGAAGAGAGGTTAAATTCGGTTCAATGCCATACATC
 
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JMFS154H01+           TTCTTCAGAGCCTGAGAGAAAGCAAACTGGCAATTTCCAGCATTAACAGCATCACAGAAT
                      ____________________________________________________________
consensus             TTCTTCAGAGCCTGAGAGAAAGCAAACTGGCAATTTCCAGCATTAACAGCATCACAGAAT
 
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JMFS154H01+           GACCAGAAATCCTGTTTTGTCATATCCATGTCCATAGGAGCCCAGAAAAACAAGGCGTCA
                      ____________________________________________________________
consensus             GACCAGAAATCCTGTTTTGTCATATCCATGTCCATAGGAGCCCAGAAAAACAAGGCGTCA
 
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JMFS154H01+           CCATATCTTTGTGCTTCAATAGCATTTACCAATGATGTTTCAGCCGTCTTAGACAAAGAT
                      ____________________________________________________________
consensus             CCATATCTTTGTGCTTCAATAGCATTTACCAATGATGTTTCAGCCGTCTTAGACAAAGAT