Contig 010526:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040N13Sequence359023753gb|KDP28542.1|9e-12hypothetical protein JCGZ_14313 [Jatropha curcas]713010526 (3)gb|KDO86354.1|3e-69hypothetical protein CISIN_1g0016461mg, partial [Citrus sinensis]
JMFS005B06Sequence549010526 (3)gb|KDO86354.1|2e-38hypothetical protein CISIN_1g0016461mg, partial [Citrus sinensis]
JMFS154H01Sequence606010526 (3)ref|XP_009764569.1|332PREDICTED: uncharacterized protein LOC104216249 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF040N13- ATGAAGGAG
                      ____________________________________________________________
consensus ATGAAGGAG
 
. : . : . : . : . : . :
JMFS005B06+ TTTGAGAGTTCCCCCTAAACCACACC
rJMFF040N13- CCTTTTAACCATTTACACAACTGTTTCGTTAGATTTTGAGAGTTCCCCCTAAACCACACC
                      ____________________________________________________________
consensus CCTTTTAACCATTTACACAACTGTTTCGTTAGATTTTGAGAGTTCCCCCTAAACCACACC
 
. : . : . : . : . : . :
JMFS005B06+ CAAAAAAAATTATGAACAGACAGCACCAGAAGGATCGAGGATGTATCTACCTACAAGAAC
rJMFF040N13- CAAAAAAAATTATGAACAGACAGCACCAGAAGGATCGAGGATGTATCTACCTACAAGAAC
                      ____________________________________________________________
consensus CAAAAAAAATTATGAACAGACAGCACCAGAAGGATCGAGGATGTATCTACCTACAAGAAC
 
. : . : . : . : . : . :
JMFS005B06+ TAACAGAATATTTGGCCTAAGCATCCCTTGATTCCCTTCTTGCAAACGGGAATGAAAGAA
rJMFF040N13- TAACAGAATATTTGGCCTAAGCATCCCTTGATTCCCTTCTTGCAAACGGGAATGAAAGAA
                      ____________________________________________________________
consensus TAACAGAATATTTGGCCTAAGCATCCCTTGATTCCCTTCTTGCAAACGGGAATGAAAGAA
 
. : . : . : . : . : . :
JMFS005B06+ TGGCGGCAGGTAGTATTGGTGAAGTGAAAAATGTTAACTACTTTGTGAGATGGAATGTTA
rJMFF040N13- TGGCGGCAGGTAGTATTGGTGAAGTGAAAAATGTTAACTACTTTGTGAGATGGAATGTTA
                      ____________________________________________________________
consensus TGGCGGCAGGTAGTATTGGTGAAGTGAAAAATGTTAACTACTTTGTGAGATGGAATGTTA
 
. : . : . : . : . : . :
JMFS005B06+ CCTGGAAGCTATGCTGCAGCAGCTTGTGTTGAGTTAGAATTTTCTGTATTCTCGAGTAGA
rJMFF040N13- CCTGGAAGCTATGCTGCAGCAGCTTGTGTTGAGTTAGAATTTTCTGTATTCTCGAGTAGA
                      ____________________________________________________________
consensus CCTGGAAGCTATGCTGCAGCAGCTTGTGTTGAGTTAGAATTTTCTGTATTCTCGAGTAGA
 
. : . : . : . : . : . :
JMFS005B06+ GGCTTCACGTATTTCCCTAATGCTTTTTGGCGAGTCCGTTGTCTCATCCTAAAGAGCTTA
rJMFF040N13- GGCTTCACGTATTTCCCTAATACTTTTTGGCGAGTCCGTTGTCTCATCCTAAAGAGCTTA
                      ____________________________________________________________
consensus GGCTTCACGTATTTCCCTAATGCTTTTTGGCGAGTCCGTTGTCTCATCCTAAAGAGCTTA
 
. : . : . : . : . : . :
JMFS005B06+ TCTTTACTCTGTTGCTTCTTTATCTCTCTCTCTTTATTCCTTAGACTCCTCTCCTTCTCT
rJMFF040N13- TCTTTACTCTGTTGCTTCTTTATCTCTCTCTCTTTATTCCTTAGACTCCTCTCCTTCTCT
                      ____________________________________________________________
consensus TCTTTACTCTGTTGCTTCTTTATCTCTCTCTCTTTATTCCTTAGACTCCTCTCCTTCTCT
 
. : . : . : . : . : . :
JMFS005B06+ AAGATACCTTGCCAGAAAACTTCACCTGTGGCCGGCCATAGCCACCGCTTCTTCGGAGGG
rJMFF040N13- AAGATACCTTGCCAGAAAACTTCACCTGTGGCCGGCCATAGCCACCGCTTCTTCGGAGGG
JMFS154H01+ GGAGGG
                      ____________________________________________________________
consensus AAGATACCTTGCCAGAAAACTTCACCTGTGGCCGGCCATAGCCACCGCTTCTTCGGAGGG
 
. : . : . : . : . : . :
JMFS005B06+ TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
rJMFF040N13- TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
JMFS154H01+ TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
                      ____________________________________________________________
consensus TCAGTATCAGCCAACTCAGCCAGCTCCTCATCCAGGCTCTTAAGTGTCTCATACTGGAAC
 
. : . : . : . : . : . :
JMFS005B06+ CACTTCACCCACATATGACC
rJMFF040N13- CACTTCACCCACATATGACCTCTCCGGCTCTTCAACTCGTGTCGTTCTTGCATCAAACCT
JMFS154H01+ CACTTCACCCACATATGACCTCTCCGGCTCTTCAACTCGTGTTGTTCTTGCATCAAACCT
                      ____________________________________________________________
consensus CACTTCACCCACATATGACCTCTCCGGCTCTTCAACTCGTGTTGTTCTTGCATCAAACCT
 
. : . : . : . : . : . :
rJMFF040N13- GTATTTGCGTCCACATATACCATTCTTCTAGCGCTATGGTACGCCCAAACGTTTATGAGC
JMFS154H01+ GTATTTGCGTCCACATATACCATTCTTCTAGCGCTATGGTACGCCCAAACGTTTATGAGC
                      ____________________________________________________________
consensus GTATTTGCGTCCACATATACCATTCTTCTAGCGCTATGGTACGCCCAAACGTTTATGAGC
 
. : . : . : . : . : . :
rJMFF040N13- AGCTCCAGCAGCCTCGAGTAGCAATGCTTGTCCTGCTGACTTAA
JMFS154H01+ AGCTCCAGCAGCCTCGAGTAGCAATGCTTGTCCTGCTGACTTAAACTCAAGTAGCAATAT
                      ____________________________________________________________
consensus AGCTCCAGCAGCCTCGAGTAGCAATGCTTGTCCTGCTGACTTAAACTCAAGTAGCAATAT
 
. : . : . : . : . : . :
JMFS154H01+ CCACTCTCATGGTGCTCGTCATAGAAGTGTGAGTCGAGTGCATCAACAAACATTCTTGAA
                      ____________________________________________________________
consensus CCACTCTCATGGTGCTCGTCATAGAAGTGTGAGTCGAGTGCATCAACAAACATTCTTGAA
 
. : . : . : . : . : . :
JMFS154H01+ AACATTACGAACTCTAGGAAGGATCTTGTCGGTAAAACCCAACTATGCATGCGCGACCAA
                      ____________________________________________________________
consensus AACATTACGAACTCTAGGAAGGATCTTGTCGGTAAAACCCAACTATGCATGCGCGACCAA
 
. : . : . : . : . : . :
JMFS154H01+ GTGCCTCCATCAACAGGCATTGGCGGAAGAGAGGTTAAATTCGGTTCAATGCCATACATC
                      ____________________________________________________________
consensus GTGCCTCCATCAACAGGCATTGGCGGAAGAGAGGTTAAATTCGGTTCAATGCCATACATC
 
. : . : . : . : . : . :
JMFS154H01+ TTCTTCAGAGCCTGAGAGAAAGCAAACTGGCAATTTCCAGCATTAACAGCATCACAGAAT
                      ____________________________________________________________
consensus TTCTTCAGAGCCTGAGAGAAAGCAAACTGGCAATTTCCAGCATTAACAGCATCACAGAAT
 
. : . : . : . : . : . :
JMFS154H01+ GACCAGAAATCCTGTTTTGTCATATCCATGTCCATAGGAGCCCAGAAAAACAAGGCGTCA
                      ____________________________________________________________
consensus GACCAGAAATCCTGTTTTGTCATATCCATGTCCATAGGAGCCCAGAAAAACAAGGCGTCA
 
. : . : . : . : . : . :
JMFS154H01+ CCATATCTTTGTGCTTCAATAGCATTTACCAATGATGTTTCAGCCGTCTTAGACAAAGAT
                      ____________________________________________________________
consensus CCATATCTTTGTGCTTCAATAGCATTTACCAATGATGTTTCAGCCGTCTTAGACAAAGAT