Contig 010522:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS106D06Sequence625010522 (3)ref|XP_009763883.1|2e-42PREDICTED: calmodulin-binding transcription activator 3-like isoform X2 [Nicoti
JMFS110G09Sequence618010522 (3)ref|XP_009763883.1|3e-45PREDICTED: calmodulin-binding transcription activator 3-like isoform X2 [Nicoti
JMFS152B10Sequence621010522 (3)ref|XP_009763883.1|8e-47PREDICTED: calmodulin-binding transcription activator 3-like isoform X2 [Nicoti

Alignment

This contig is upended


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JMFS106D06+                                                 ACCCAACAAGGGTTGCTTGAAA
                      ____________________________________________________________
consensus                                                   ACCCAACAAGGGTTGCTTGAAA
 
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JMFS106D06+           GCCAAATGATCAGTTNTGCCATCCACATTGAAACTGCCATCTGACTCGGCTTTCACAAAT
JMFS110G09+                                                                     AT
                      ____________________________________________________________
consensus             GCCAAATGATCAGTTNTGCCATCCACATTGAAACTGCCATCTGACTCGGCTTTCACAAAT
 
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JMFS106D06+           CTACCGTTTTGCATAGGATGCTTATCTGGTTCAGTATGAAGTATATTGTACGCCTCCAAG
JMFS110G09+           CTACCGTTTTGCATAGGATGCTTATCTGGTTCAGTATGAAGTATATTGTACGCCTCCAAG
JMFS152B10+                                                  AGTATATTGTACGCCTCCAAG
                      ____________________________________________________________
consensus             CTACCGTTTTGCATAGGATGCTTATCTGGTTCAGTATGAAGTATATTGTACGCCTCCAAG
 
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JMFS106D06+           GAATCATGAAACTCGGCATGCTTCTCTTTATCTAACTTGCTAGCAAAATCAAATGTTTGA
JMFS110G09+           GAATCATGAAACTCCGCATGCTTCTCTTTATCTAACTTGCTAGCAAAATCAAATGTTTGA
JMFS152B10+           GAATCATGAAACTCCGCATGCTTCTCTTTATCTAACTTGCTAGCAAAATCAAATGTTTGA
                      ____________________________________________________________
consensus             GAATCATGAAACTCCGCATGCTTCTCTTTATCTAACTTGCTAGCAAAATCAAATGTTTGA
 
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JMFS106D06+           TGCGGTTCCATCTTCTGATCAACTGACCACTCCGATGATTGCAAGGAATTGCCTTTAGAT
JMFS110G09+           TGCGGTTCCATCTTCTGATCAACTGACCACTCCGATGATTGCAAGGAATTGCCTTTAGAT
JMFS152B10+           TGCGGTTCCATCTTCTGATCAACTGACCACTCCGATGATTGCAAGGAATTGCCTTTAGAT
                      ____________________________________________________________
consensus             TGCGGTTCCATCTTCTGATCAACTGACCACTCCGATGATTGCAAGGAATTGCCTTTAGAT
 
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JMFS106D06+           GCCTGCCATTCTTCTAGGGCATGGAAATGGTTGTCAGCCTCCTGCTTAATACTGAAGTCG
JMFS110G09+           GCCTGCCATTCTTCTAGGGCATGGAAATGGTTGTCAGCCTCCTGCTTAATACTGAAGTCG
JMFS152B10+           GCCTGCCATTCTTCTAGGGCATGGAAATGGTTGTCAGCCTCCTGCTTAATACTGAAGTCG
                      ____________________________________________________________
consensus             GCCTGCCATTCTTCTAGGGCATGGAAATGGTTGTCAGCCTCCTGCTTAATACTGAAGTCG
 
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JMFS106D06+           TTTGTGAAATCAATCATAGCGCTTCCTTGTCCATTGATTGTGTTTATTGCAGCAGACTGG
JMFS110G09+           TTTGTGAAATCAATCATAGCGCTTCCTTGTCCATTGATTGTGTTTATTGCAGCAGACTGG
JMFS152B10+           TTTGTGAAATCAATCATAGCGCTTCCTTGTCCATTGATTGTGTTTATTGCAGCAGACTGG
                      ____________________________________________________________
consensus             TTTGTGAAATCAATCATAGCGCTTCCTTGTCCATTGATTGTGTTTATTGCAGCAGACTGG
 
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JMFS106D06+           GTTGAGGAAATTGAAGGTTGAAATTGTACAGATTGATAATCAGCAGTATTCTTCTCGGGA
JMFS110G09+           GTTGAGGAAATTGAAGGTTGAAATTGTACAGATTGATAATCAGCAGTATTCTTCTCGGGA
JMFS152B10+           GTTGAGGAAATTGAAGGTTGAAATTGTACAGATTGATAATCAGCAGTATTCTTCTCGGGA
                      ____________________________________________________________
consensus             GTTGAGGAAATTGAAGGTTGAAATTGTACAGATTGATAATCAGCAGTATTCTTCTCGGGA
 
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JMFS106D06+           ACATTTTCCCATGATGGGAAATCAAGGTCTCTGCAGGGCATATATGCATTTGCAGTGTTC
JMFS110G09+           ACATTTTCCCATGATGGGAAATCAAGGTCTCTGCAGGGCATATATGCATTTGCAGTGTTC
JMFS152B10+           ACATTTTCCCATGATGGGAAATCAAGGTCTCTGCAGGGCATATATGCATTTGCAGTGTTC
                      ____________________________________________________________
consensus             ACATTTTCCCATGATGGGAAATCAAGGTCTCTGCAGGGCATATATGCATTTGCAGTGTTC
 
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JMFS106D06+           CTGTTCTGGTTTCCATGTGTGGTTGAGGGGAAGTTCATACCAGTAATAGCTGGATAATAG
JMFS110G09+           CTGTTCTGGTTTCCATGTGTGGTTGAGGGGAAGTTCATACCAGTAATAGCTGGATAATAG
JMFS152B10+           CTGTTCTGGTTTCCATGTGTGGTTGAGGGGAAGTTCATACCAGTAATAGCTGGATAATAG
                      ____________________________________________________________
consensus             CTGTTCTGGTTTCCATGTGTGGTTGAGGGGAAGTTCATACCAGTAATAGCTGGATAATAG
 
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JMFS106D06+           CCTTGATGATCATCTGAGAAGGGGGCTGGATAATAAGGAGCAGAAAGCCCATCCTCAGCC
JMFS110G09+           CCTTGATGATCATCTGAGAAGGGGGCTGGATAATAAGGAGCAGAAAGCCCATCCTCAGCC
JMFS152B10+           CCTTGATGATCATCTGAGAAGGGGGCTGGATAATAAGGAGCAGAAAGCCCATCCTCAGCC
                      ____________________________________________________________
consensus             CCTTGATGATCATCTGAGAAGGGGGCTGGATAATAAGGAGCAGAAAGCCCATCCTCAGCC
 
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JMFS106D06+           TTC                                                         
JMFS110G09+           TTCGGGATCACGTTTGACTGAAATTCAGTAAAAGAGTGGACTCCAGAAGTTGATTGTTGA
JMFS152B10+           TTCGGGATCACGTTTGACTGAAATTCAGTAAAAGAGTGGACTCCAGAAGTTGATTGTTGA
                      ____________________________________________________________
consensus             TTCGGGATCACGTTTGACTGAAATTCAGTAAAAGAGTGGACTCCAGAAGTTGATTGTTGA
 
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JMFS110G09+           TTGTACACTGATTCAA                                            
JMFS152B10+           TTGTACACTGATTCAACATCTTCATATTCTGAGGCCTGACCACTGTTAAGGCTAGTTGTA
                      ____________________________________________________________
consensus             TTGTACACTGATTCAACATCTTCATATTCTGAGGCCTGACCACTGTTAAGGCTAGTTGTA