clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF019I21 | Sequence | 600 | 010519 (11) | emb|CDP16685.1| | 3e-50 | unnamed protein product [Coffea canephora] | 628 | 001870 (9) | ref|XP_009596046.1| | 5e-74 | PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis] |
JMFF041D07 | Sequence | 658 | 010519 (11) | emb|CDP16685.1| | 2e-66 | unnamed protein product [Coffea canephora] | 476 | 001870 (9) | ref|XP_006357190.1| | 1e-37 | PREDICTED: chloride channel protein CLC-b-like [Solanum tuberosum] |
JMFF045J08 | Sequence | 667 | 010519 (11) | emb|CDP16685.1| | 1e-52 | unnamed protein product [Coffea canephora] | |||||
JMFF050I04 | Sequence | 590 | 010519 (11) | ref|XP_011097296.1| | 2e-34 | PREDICTED: chloride channel protein CLC-b-like [Sesamum indicum] | 566 | 001870 (9) | ref|XP_009761471.1| | 5e-46 | PREDICTED: chloride channel protein CLC-b-like [Nicotiana sylvestris] |
JMFS012A07 | Sequence | 618 | 010519 (11) | emb|CDP16685.1| | 2e-61 | unnamed protein product [Coffea canephora] | |||||
JMFS086G03 | Sequence | 644 | 010519 (11) | emb|CDP16685.1| | 4e-42 | unnamed protein product [Coffea canephora] | |||||
JMFS091B02 | Sequence | 626 | 010519 (11) | emb|CDP16685.1| | 6e-53 | unnamed protein product [Coffea canephora] | |||||
JMFS145H05 | Sequence | 631 | 010519 (11) | emb|CDP16685.1| | 1e-35 | unnamed protein product [Coffea canephora] | |||||
JMFS147F05 | Sequence | 632 | 010519 (11) | emb|CDP16685.1| | 1e-58 | unnamed protein product [Coffea canephora] | |||||
JMSF020G03 | Sequence | 713 | 010519 (11) | emb|CDP16685.1| | 5e-76 | unnamed protein product [Coffea canephora] | 768 | 001870 (9) | gb|AAD29679.1|AF133209_1 | 3e-119 | CLC-Nt2 protein [Nicotiana tabacum] |
JMSF052B13 | Sequence | 693 | 010519 (11) | emb|CDP16685.1| | 2e-86 | unnamed protein product [Coffea canephora] | 824 | 001870 (9) | gb|AAD29679.1|AF133209_1 | 2e-120 | CLC-Nt2 protein [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMSF052B13+ CTGATACAGCTCCA
____________________________________________________________
consensus CTGATACAGCTCCA
. : . : . : . : . : . :
JMSF052B13+ ATGCTTCCAATGATCTTGACAATCAGTGTTGTGGCACCAAACATATTGGGAGTGTCTATT
JMSF020G03+ CCAAACATATTGGGAGTGTCTATT
____________________________________________________________
consensus ATGCTTCCAATGATCTTGACAATCAGTGTTGTGGCACCAAACATATTGGGAGTGTCTATT
. : . : . : . : . : . :
JMSF052B13+ CCATTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAAG
JMFS012A07+ GGGGCCTGCGGCGGTAGGTGCAANAAAG
JMFF041D07+ TGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAANAAAG
JMFF045J08+ TTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAGA
JMFS147F05+ TAGGTGCAAAAAAG
JMSF020G03+ CCATTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAAG
____________________________________________________________
consensus CCATTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAAG
. : . : . : . : . : . :
JMSF052B13+ ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFS012A07+ ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF041D07+ ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF045J08+ CCACACAGAAACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFS091B02+ AG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFS147F05+ ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF019I21+ AGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMSF020G03+ ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF050I04+ CCCAACAAAATATGCAAA
____________________________________________________________
consensus ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
. : . : . : . : . : . :
JMSF052B13+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS012A07+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF041D07+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF045J08+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS091B02+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS147F05+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS086G03+ ACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF019I21+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMSF020G03+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF050I04+ ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
____________________________________________________________
consensus ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
. : . : . : . : . : . :
JMSF052B13+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS012A07+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF041D07+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF045J08+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS091B02+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS147F05+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS086G03+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF019I21+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMSF020G03+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF050I04+ AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
____________________________________________________________
consensus AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
. : . : . : . : . : . :
JMSF052B13+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS012A07+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF041D07+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF045J08+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS091B02+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS147F05+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS086G03+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF019I21+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMSF020G03+ GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF050I04+ GAACGCCAGTGTCCA-TTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
____________________________________________________________
consensus GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
. : . : . : . : . : . :
JMSF052B13+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS012A07+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF041D07+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF045J08+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS091B02+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS147F05+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS086G03+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF019I21+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMSF020G03+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF050I04+ CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS145H05+ CTCGTAATCCAGACTCTCTATGGGAGA
____________________________________________________________
consensus CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
. : . : . : . : . : . :
JMSF052B13+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS012A07+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF041D07+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF045J08+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS091B02+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS147F05+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS086G03+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF019I21+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMSF020G03+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF050I04+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS145H05+ AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
____________________________________________________________
consensus AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
. : . : . : . : . : . :
JMSF052B13+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS012A07+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF041D07+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF045J08+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS091B02+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS147F05+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS086G03+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF019I21+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMSF020G03+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF050I04+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS145H05+ AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
____________________________________________________________
consensus AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
. : . : . : . : . : . :
JMSF052B13+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS012A07+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF041D07+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF045J08+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS091B02+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS147F05+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS086G03+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF019I21+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMSF020G03+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF050I04+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS145H05+ GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
____________________________________________________________
consensus GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
. : . : . : . : . : . :
JMSF052B13+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS012A07+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF041D07+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF045J08+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS091B02+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS147F05+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS086G03+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF019I21+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMSF020G03+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF050I04+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS145H05+ TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
____________________________________________________________
consensus TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
. : . : . : . : . : . :
JMSF052B13+ AGAATCAATATATGTAG
JMFS012A07+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAA
JMFF041D07+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFF045J08+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFS091B02+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGGAAACATAAATCT
JMFS147F05+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFS086G03+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFF019I21+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMSF020G03+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFF050I04+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFS145H05+ AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
____________________________________________________________
consensus AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
. : . : . : . : . : . :
JMFF041D07+ CGCCCAGAAT
JMFF045J08+ CGCCCAGAAT
JMFS091B02+ CGCCCAGAATAAAAAAA
JMFS147F05+ CGCCCAGAATAAAAAAAAT
JMFS086G03+ CGCCCAGAATAAAAAAA
JMFF019I21+ CGCCCAGAATAAAAAAAATAAAAAATGC
JMSF020G03+ CGCCCAGAATAAAAAAAATAAAAAATGC
JMFF050I04+ CGCCCAGAATAAAAAAAATAAAAAATGC
JMFS145H05+ CGCCCAGAATAAAAAAAATAAAAAATGCAGGCAGGCAGGGATGATAACTTCTGGGAAATA
____________________________________________________________
consensus CGCCCAGAATAAAAAAAATAAAAAATGCAGGCAGGCAGGGATGATAACTTCTGGGAAATA