Contig 010517:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS060G06Sequence623010517 (4)ref|XP_004237260.1|3e-38PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [S
JMFS081F01Sequence602010517 (4)ref|XP_004237260.1|3e-38PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [S
JMFS144E11Sequence625010517 (4)ref|XP_004237260.1|3e-34PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [S
JMFS145B02Sequence625010517 (4)ref|XP_004237260.1|6e-49PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [S

Alignment

This contig is upended


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JMFS145B02+                                                   AGATATTGCTTACAGAAACC
                      ____________________________________________________________
consensus                                                     AGATATTGCTTACAGAAACC
 
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JMFS145B02+           ATAATAAAATTTTTTCTGGATGTCTGGGGGTAGAAAAGTAGGCACACACTTGAAGTCGTC
JMFS081F01+                                                             TGAAGTCGTC
JMFS060G06+                                                             TGAAGTCGTC
JMFS144E11+                                                             TGAAGTCGTC
                      ____________________________________________________________
consensus             ATAATAAAATTTTTTCTGGATGTCTGGGGGTAGAAAAGTAGGCACACACTTGAAGTCGTC
 
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JMFS145B02+           CAGCAGTCTCTGTGCAACTTCCTCTTGTTCACTGGGTTCTATATCAGCCTTGAGGCAACC
JMFS081F01+           CAGCAGTCTCTGTGCAACTTCCTCTTGTTCACTGGGTTCTATATCAGCCTTGAGGCAACC
JMFS060G06+           CAGCAGTCTCTGTGCAACTTCCTCTTGTTCACTGGGTTCTATATCAGCCTTGAGGCAACC
JMFS144E11+           CAGCAGTCTCTGTGCAACTTCCTCTTGTTCACTGGGTTCTATATCAGCCTTGAGGCAACC
                      ____________________________________________________________
consensus             CAGCAGTCTCTGTGCAACTTCCTCTTGTTCACTGGGTTCTATATCAGCCTTGAGGCAACC
 
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JMFS145B02+           CACGTAGATGACCTCGGTTTCAGGAGAAAACCCATCCTTCAATTGTAAAAGAAGTGAGTC
JMFS081F01+           CACGTAGATGACCTCGGTTTCAGGAGAAAACCCATCCTTCAATTGTAAAAGAAGTGAGTC
JMFS060G06+           CACGTAGATGACCTCGGTTTCAGGAGAAAACCCATCCTTCAATTGTAAAAGAAGTGAGTC
JMFS144E11+           CACGTAGATGACCTCGGTTTCAGGAGAAAACCCATCCTTCAATTGTAAAAGAAGTGAGTC
                      ____________________________________________________________
consensus             CACGTAGATGACCTCGGTTTCAGGAGAAAACCCATCCTTCAATTGTAAAAGAAGTGAGTC
 
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JMFS145B02+           CTTGTCCAAACTAAAGCACCATTTTGAAGTTCCTTTATCCCTTTGAGCATGCAAAGGAAG
JMFS081F01+           CTTGTCCAAACTAAAGCACCATTTTGAAGTTCCTTTATCCCTTTGAGCATGCAAAGGAAG
JMFS060G06+           CTTGTCCAAACTAAAGCACCATTTTGAAGTTCCTTTATCCCTTTGAGCATGCAAAGGAAG
JMFS144E11+           CTTGTCCAAACTAAAGCACCATTTTGAAGTTCCTTTATCCCTTTGAGCATGCAAAGGAAG
                      ____________________________________________________________
consensus             CTTGTCCAAACTAAAGCACCATTTTGAAGTTCCTTTATCCCTTTGAGCATGCAAAGGAAG
 
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JMFS145B02+           CATATTAGAAACAACAATTTTACGATCTCGACAAATGGATGAAGTACCATCTGAATCACC
JMFS081F01+           CATATTAGAAACAACAATTTTACGATCTCGACAAATGGATGAAGTACCATCTGAATCACC
JMFS060G06+           CATATTAGAAACAACAATTTTACGATCTCGACAAATGGATGAAGTACCATCTGAATCACC
JMFS144E11+           CATATTAGAAACAACAATTTTACGATCTCGACAAATGGATGAAGTACCATCTGAATCACC
                      ____________________________________________________________
consensus             CATATTAGAAACAACAATTTTACGATCTCGACAAATGGATGAAGTACCATCTGAATCACC
 
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JMFS145B02+           ATCATTGCTTCCATCAGAGATGATTCCAGGAACAGTCATCAGCCGAGGAAGAACTCTAGG
JMFS081F01+           ATCATTGCTTCCATCAGAGATGATTCCAGGAACAGTCATCAGCCGAGGAAGAACTCTAGG
JMFS060G06+           ATCATTGCTTCCATCAGAGATGATTCCAGGAACAGTCATCAGCCGAGGAAGAACTCTAGG
JMFS144E11+           ATCATTGCTTCCATCAGAGATGATTCCAGGAACAGTCATCAGCCGAGGAAGAACTCTAGG
                      ____________________________________________________________
consensus             ATCATTGCTTCCATCAGAGATGATTCCAGGAACAGTCATCAGCCGAGGAAGAACTCTAGG
 
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JMFS145B02+           AGTTTGCAGAATATCTAAAATCTCTTCAGAAGAAAAGTCCAAAAGGTTTGCAGAAGATAT
JMFS081F01+           AGTTTGCAGAATATCTAAAATCTCTTCAGAAGAAAAGTCCAAAAGGTTTGCAGAAGATAT
JMFS060G06+           AGTTTGCAGAATATCTAAAATCTCTTCAGAAGAAAAGTCCAAAAGGTTTGCAGAAGATAT
JMFS144E11+           AGTTTGCAGAATATCTAAAATCTCTTCAGAAGAAAAGTCCAAAAGGTTTGCAGAAGATAT
                      ____________________________________________________________
consensus             AGTTTGCAGAATATCTAAAATCTCTTCAGAAGAAAAGTCCAAAAGGTTTGCAGAAGATAT
 
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JMFS145B02+           TGACGCCATGTCTTGTAAATAAACTTCTTGTATTTAATCAATACAGATGCTTATAACTTA
JMFS081F01+           TGACGCCATGTCTTGTAAATAAACTTCTTGTATTTAATCAATACAGATGCTTATAACTTA
JMFS060G06+           TGACGCCATGTCTTGTAAATAAACTTCTTGTATTTAATCAATACAGATGCTTATAACTTA
JMFS144E11+           TGACGCCATGTCTTGTAAATAAACTTCTTGTATTTAATCAATACAGATGCTTATAACTTA
                      ____________________________________________________________
consensus             TGACGCCATGTCTTGTAAATAAACTTCTTGTATTTAATCAATACAGATGCTTATAACTTA
 
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JMFS145B02+           TAGAAAACTGTGGTTGAATTGTAAGTCCCACTTGTTATGGTATTAACATGCCCACCAACA
JMFS081F01+           TAGAAAACTGTGGTTGAATTGTAAGTCCCACTTGTTATGGTATTAACATGCCCACCAACA
JMFS060G06+           TAGAAAACTGTGGTTGAATTGTAAGTCCCACTTGTTATGGTATTAACATGCCCACCAACA
JMFS144E11+           TAGAAAACTGTGGTTGAATTGTAAGTCCCACTTGTTATGGTATTAACATGCCCACCAACA
                      ____________________________________________________________
consensus             TAGAAAACTGTGGTTGAATTGTAAGTCCCACTTGTTATGGTATTAACATGCCCACCAACA
 
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JMFS145B02+           CGTAAGAACTCCGACGAGACTGCTGCCGGAAAACGCTGAAAACGTCAAGTACCGATATAA
JMFS081F01+           CGTAAGAACTCCGACGAGACTGCTGCCGGAAAACGCTGAAAACGTCAAGTACCGATATAA
JMFS060G06+           CGTAAGAACTCCGACGAGACTGCTGCCGGAAAACGCTGAAAACGTCAAGTACCGATATAA
JMFS144E11+           CGTAAGAACTCCGACGAGACTGCTGCCGGAAAACGCTGAAAACGTCAAGTACCGATATAA
                      ____________________________________________________________
consensus             CGTAAGAACTCCGACGAGACTGCTGCCGGAAAACGCTGAAAACGTCAAGTACCGATATAA
 
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JMFS145B02+           GC                                                          
JMFS081F01+           GCGGAGGAGGTTACAGAGAGAGAGAGAGAGAGAGAG                        
JMFS060G06+           GCGGAGGAGGTTACAGAGAGAGAGAGAGAGAGAGAGGGGTTTCAACGGAAGGAAAAT   
JMFS144E11+           GCGGAGGAGGTTACAGAGAGAGAGAGAGAGAGAGAGGGGTTTCAACGGAAGGAAAATAAA
                      ____________________________________________________________
consensus             GCGGAGGAGGTTACAGAGAGAGAGAGAGAGAGAGAGGGGTTTCAACGGAAGGAAAATAAA