Contig 010516:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS094A08Sequence646010516 (3)ref|XP_006361856.1|3e-11PREDICTED: dentin sialophosphoprotein-like isoform X3 [Solanum tuberosum]
JMFS143F11Sequence625010516 (3)ref|XP_006361856.1|4e-11PREDICTED: dentin sialophosphoprotein-like isoform X3 [Solanum tuberosum]
JMFS161B12Sequence615010516 (3)ref|XP_006361856.1|3e-11PREDICTED: dentin sialophosphoprotein-like isoform X3 [Solanum tuberosum]

Alignment

This contig is upended


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JMFS094A08+                                                   CCAATCAAAACTNTGCGTCG
                      ____________________________________________________________
consensus                                                     CCAATCAAAACTNTGCGTCG
 
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JMFS094A08+           TAGCTAAATCCTTCTTCAGGTCCAAATTGGAGCTCAGATTACCAGACTCGCCAGCATATG
JMFS161B12+                                                       GACTCGCCAGCATATG
JMFS143F11+                                              AGATTACCAGACTCGCCAGCATATG
                      ____________________________________________________________
consensus             TAGCTAAATCCTTCTTCAGGTCCAAATTGGAGCTCAGATTACCAGACTCGCCAGCATATG
 
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JMFS094A08+           AAGAGGGATTTCCCGATTGGAACTGCGGATTCTGATTGTAAAAGTTCGCAAAAAAGCCGT
JMFS161B12+           AAGAGGGATTTCCCGATTGGAACTGCGGATTCTGATTGTAAAAGTTCGCAAAAAAGCCGT
JMFS143F11+           AAGAGGGATTTCCCGATTGGAACTGCGGATTCTGATTGTAAAAGTTCGCAAAAAAGCCGT
                      ____________________________________________________________
consensus             AAGAGGGATTTCCCGATTGGAACTGCGGATTCTGATTGTAAAAGTTCGCAAAAAAGCCGT
 
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JMFS094A08+           TCGATATAATACTCGAATCCGTATTCGATCCATTGCTCAGTTTCTTAGCTTCTTCCTTTG
JMFS161B12+           TCGATATAATACTCGAATCCGTATTCGATCCATTGCTCAGTTTCTTAGCTTCTTCCTTTG
JMFS143F11+           TCGATATAATACTCGAATCCGTATTCGATCCATTGCTCAGTTTCTTAGCTTCTTCCTTTG
                      ____________________________________________________________
consensus             TCGATATAATACTCGAATCCGTATTCGATCCATTGCTCAGTTTCTTAGCTTCTTCCTTTG
 
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JMFS094A08+           CATTTTGAGCTTCGACATGAGCATATTTCTCTTCCTTACCAGGTTTCTCCTCATCTTCTG
JMFS161B12+           CATTTTGAGCTTCGACATGAGCATATTTCTCTTCCTTACCAGGTTTCTCCTCATCTTCTG
JMFS143F11+           CATTTTGAGCTTCGACATGAGCATATTTCTCTTCCTTACCAGGTTTCTCCTCATCTTCTG
                      ____________________________________________________________
consensus             CATTTTGAGCTTCGACATGAGCATATTTCTCTTCCTTACCAGGTTTCTCCTCATCTTCTG
 
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JMFS094A08+           CTTCTCCAAATAACGAAAGCGGCAAAGCGCCTCGGGGTTTCACCCACTGTACAATTCTAG
JMFS161B12+           CTTCTCCAAATAACGAAAGCGGCAAAGCGCCTCGGGGTTTCACCCACTGTACAATTCTAG
JMFS143F11+           CTTCTCCAAATAACGAAAGCGGCAAAGCGCCTCGGGGTTTCACCCACTGTACAATTCTAG
                      ____________________________________________________________
consensus             CTTCTCCAAATAACGAAAGCGGCAAAGCGCCTCGGGGTTTCACCCACTGTACAATTCTAG
 
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JMFS094A08+           ACGATTCAATTTGGCTGGTCGGCGGTTCGATTGACCGAGTTGATTGATCCGGATGCTGAG
JMFS161B12+           ACGATTCAATTTGGCTGGTCGGCGGTTCGATTGACCGAGTTGATTGATCCGGATGCTGAG
JMFS143F11+           ACGATTCAATTTGGCTGGTCGGCGGTTCGATTGACCGAGTTGATTGATCCGGATGCTGAG
                      ____________________________________________________________
consensus             ACGATTCAATTTGGCTGGTCGGCGGTTCGATTGACCGAGTTGATTGATCCGGATGCTGAG
 
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JMFS094A08+           ATCCATGATTGGAGAAGACAGCAAACGGGTCGAGCTGTGTGGGTTGAGAGGGTCCATTGG
JMFS161B12+           ATCCATGATTGGAGAAGACAGCAAACGGGTCGAGCTGTGTGGGTTGAGAGGGTCCATTGG
JMFS143F11+           ATCCATGATTGGAGAAGACAGCAAACGGGTCGAGCTGTGTGGGTTGAGAGGGTCCATTGG
                      ____________________________________________________________
consensus             ATCCATGATTGGAGAAGACAGCAAACGGGTCGAGCTGTGTGGGTTGAGAGGGTCCATTGG
 
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JMFS094A08+           AGGGATCCGATCCTCTCGAGTAATCCAAAAATTCGCCCCATTCATCGTCTTCTTCATTGT
JMFS161B12+           AGGGATCCGATCCTCTCGAGTAATCCAAAAATTCGCCCCATTCATCGTCTTCTTCATTGT
JMFS143F11+           AGGGATCCGATCCTCTCGAGTAATCCAAAAATTCGCCCCATTCATCGTCTTCTTCATTGT
                      ____________________________________________________________
consensus             AGGGATCCGATCCTCTCGAGTAATCCAAAAATTCGCCCCATTCATCGTCTTCTTCATTGT
 
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JMFS094A08+           TGCCAGCAGCGATGGTGGTGGGAGTTGGGTTTGGGGCGTTGATTGGGTAAGACGCGGAAG
JMFS161B12+           TGCCAGCAGCGATGGTGGTGGGAGTTGGGTTTGGGGCGTTGATTGGGTAAGACGCGGAAG
JMFS143F11+           TGCCAGCAGCGATGGTGGTGGGAGTTGGGTTTGGGGCGTTGATTGGGTAAGACGCGGAAG
                      ____________________________________________________________
consensus             TGCCAGCAGCGATGGTGGTGGGAGTTGGGTTTGGGGCGTTGATTGGGTAAGACGCGGAAG
 
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JMFS094A08+           TGAAGTCTCCAAAGCTCTCATCAAAATTCCCCGCCATTATCGAAGGATGACCGAGAAATA
JMFS161B12+           TGAAGTCTCCAAAGCTCTCATCAAAATTCCCCGCCATTATCGAAGGATGACCGAGAAATA
JMFS143F11+           TGAAGTCTCCAAAGCTCTCATCAAAATTCCCCGCCATTATCGAAGGATGACCGAGAAATA
                      ____________________________________________________________
consensus             TGAAGTCTCCAAAGCTCTCATCAAAATTCCCCGCCATTATCGAAGGATGACCGAGAAATA
 
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JMFS094A08+           ACTTTCAGATTCCCACCTTCACTCCA                                  
JMFS161B12+           ACTTTCAGATTCCCACCTTCACTCCACCGCACATCGGTCCAGCGTTCAT           
JMFS143F11+           ACTTTCAGATTCCCACCTTCACTCCACCGCACATCGGTCCAGCGTTCATGAAACTACTTT
                      ____________________________________________________________
consensus             ACTTTCAGATTCCCACCTTCACTCCACCGCACATCGGTCCAGCGTTCATGAAACTACTTT