Contig 010508:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028L17Sequence320010508 (2)ref|XP_008225951.1|5e-13PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA678014863gb|AHJ14779.1|8e-87CLAVATA1 [Rhododendron ovatum]
JMFS138F08Sequence635010508 (2)emb|CDP04113.1|3e-44unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS138F08+ AGCGGGCACGAGAAGTTGTTGTCATAAGCATCCAG
                      ____________________________________________________________
consensus AGCGGGCACGAGAAGTTGTTGTCATAAGCATCCAG
 
. : . : . : . : . : . :
JMFS138F08+ AACTTGAAGCTCCGGCAGACCGGAGAAATCCCAGTCCAGACATCCACTGAACAGGTTGTT
                      ____________________________________________________________
consensus AACTTGAAGCTCCGGCAGACCGGAGAAATCCCAGTCCAGACATCCACTGAACAGGTTGTT
 
. : . : . : . : . : . :
JMFS138F08+ TGATATGTTGAGGAATCTGAGACCAGAAATGTTTGATAGTGGGAGATCCCCAAACAGGCT
                      ____________________________________________________________
consensus TGATATGTTGAGGAATCTGAGACCAGAAATGTTTGATAGTGGGAGATCCCCAAACAGGCT
 
. : . : . : . : . : . :
JMFS138F08+ GTTCCCTGCCACCGACAAATTCACCAAACTCTGAAGCTCAGATATGGCAGGCGACAGAGG
                      ____________________________________________________________
consensus GTTCCCTGCCACCGACAAATTCACCAAACTCTGAAGCTCAGATATGGCAGGCGACAGAGG
 
. : . : . : . : . : . :
JMFF028L17+ CTGATTTGTTGTACGCGTCGCA
JMFS138F08+ ACCAGAGAGGTTCAAGTTGGAAACATCTAACGAAACTACTGATTTGTTGTACGCGTCGCA
                      ____________________________________________________________
consensus ACCAGAGAGGTTCAAGTTGGAAACATCTAACGAAACTACTGATTTGTTGTACGCGTCGCA
 
. : . : . : . : . : . :
JMFF028L17+ TGTCACGCCTGTCCAATTACATAGTCCCATGTAATTCGAGAGATTCCAGGTAGACAGACT
JMFS138F08+ TGTCACGCCTGTCCAATTACATAGTCCCATGTAATTCGAGAGATTCCAGGTAGACAGACT
                      ____________________________________________________________
consensus TGTCACGCCTGTCCAATTACATAGTCCCATGTAATTCGAGAGATTCCAGGTAGACAGACT
 
. : . : . : . : . : . :
JMFF028L17+ AGGATCCGGGGCTTGAAAACTCTGTTTTACAGAAACCAGAACCGCAGCTTGTCTTCTTGC
JMFS138F08+ AGGATCCGGGGCTTGAAAACTCTGTTTTACAGAAACCAGAACCGCAGCTTGTCTTCTTGC
                      ____________________________________________________________
consensus AGGATCCGGGGCTTGAAAACTCTGTTTTACAGAAACCAGAACCGCAGCTTGTCTTCTTGC
 
. : . : . : . : . : . :
JMFF028L17+ AGAAAGACTGTCATGGGCTGAGGTGAGAAAAACAAGAAAGAAGAAGAAGAAGAGTAGGCG
JMFS138F08+ AGAAAGACTGTCATGGGCTGAGGTGAGAAAAACAAGAAAGAAGAAGAAGAAGAGTAGGCG
                      ____________________________________________________________
consensus AGAAAGACTGTCATGGGCTGAGGTGAGAAAAACAAGAAAGAAGAAGAAGAAGAGTAGGCG
 
. : . : . : . : . : . :
JMFF028L17+ CAGAGTGAGAGCAGCCATGTGGAAGATGAAAACTGAGAAAGAAAATGGGTTTTTGGTATC
JMFS138F08+ CAGAGTGAGAGCAGCCATGTGGAAGATGAAAACTGAGAAAGAAAATGGGTTTTTGGTATC
                      ____________________________________________________________
consensus CAGAGTGAGAGCAGCCATGTGGAAGATGAAAACTGAGAAAGAAAATGGGTTTTTGGTATC
 
. : . : . : . : . : . :
JMFF028L17+ AGAAATATTGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGCAGGTTTTTCTGGGTTGAT
JMFS138F08+ AGAAATATTGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGCAGGTTTTTCTGGGTTGATGA
                      ____________________________________________________________
consensus AGAAATATTGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGCAGGTTTTTCTGGGTTGATGA
 
. : . : . : . : . : . :
JMFS138F08+ AGTAGAATTGGTGCATTGATGAGGTTATCTGATGATAATAGCAGAAGAATTAAAAGCAAG
                      ____________________________________________________________
consensus AGTAGAATTGGTGCATTGATGAGGTTATCTGATGATAATAGCAGAAGAATTAAAAGCAAG