Contig 010501:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS009B05Sequence576010501 (2)ref|XP_009615996.1|2e-44PREDICTED: uncharacterized protein LOC104108619 isoform X3 [Nicotiana tomentosi
JMFS122D03Sequence538010501 (2)ref|XP_009615996.1|7e-31PREDICTED: uncharacterized protein LOC104108619 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+             GTCGGACAGAGATTCGAAGCCTTGGGCAAGACTCTCAAGCTTGAAATCAAAGTCTGCA
                      ____________________________________________________________
consensus               GTCGGACAGAGATTCGAAGCCTTGGGCAAGACTCTCAAGCTTGAAATCAAAGTCTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           GGAGTGTTTGAGTACACCTGAGCTGATGATATAGCAAAGGCTTTGAGGTCACAGTCAATG
JMFS122D03+             AGTGTTTGAGTACACCTGAGCTGATGATATAGCAAAGGCTTTGAGGTCACAGTCAATG
                      ____________________________________________________________
consensus             GGAGTGTTTGAGTACACCTGAGCTGATGATATAGCAAAGGCTTTGAGGTCACAGTCAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           TAATAGCAGCTAACATGCAAATCATCCCCCTGGATGTGATCAATAACTGATCGGGCGGAG
JMFS122D03+           TAATAGCAGCTAACATGCAAATCATCCCCCTGGATGTGATCAATAACTGATCGGGCGGAG
                      ____________________________________________________________
consensus             TAATAGCAGCTAACATGCAAATCATCCCCCTGGATGTGATCAATAACTGATCGGGCGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           TTAAGGGAGATTCCCCTTTCCGCGGAGGGTCCACCGCAGATGACTCCGACTCTCAAAACC
JMFS122D03+           TTAAGGGAGATTCCCCTTTCCGCGGAGGGTCCACCGCAGATGACTCCGACTCTCAAAACC
                      ____________________________________________________________
consensus             TTAAGGGAGATTCCCCTTTCCGCGGAGGGTCCACCGCAGATGACTCCGACTCTCAAAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           CTCCCTCCTTTCTCAGCCTTCTCCTGGCGGGCGACACCCCGGCGATCATCCACCACCTCA
JMFS122D03+           CTCCCTCCTTTCTCAGCCTTCTCCTGGCGGGCGACACCCCGGCGATCATCCACCACCTCA
                      ____________________________________________________________
consensus             CTCCCTCCTTTCTCAGCCTTCTCCTGGCGGGCGACACCCCGGCGATCATCCACCACCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           GTAGAGGAGGAGGAGGCGGATGCTCTAACCACTCCAACTCTGCAACTCCTCCAACCGCTC
JMFS122D03+           GTAGAGGAGGAGGAGGCGGATGCTCTAACCACTCCAACTCTGCAACTCCTCCAACCGCTC
                      ____________________________________________________________
consensus             GTAGAGGAGGAGGAGGCGGATGCTCTAACCACTCCAACTCTGCAACTCCTCCAACCGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           AAGCCTACACTCACTAATTTGATAATCTCTCTCGGAACGAAGAGCGGCGTCGCCTGAGAA
JMFS122D03+           AAGCCTACACTCACTAATTTGATAATCTCTCTCGGAACGAAGAGCGGCGTCGCCTGAGAA
                      ____________________________________________________________
consensus             AAGCCTACACTCACTAATTTGATAATCTCTCTCGGAACGAAGAGCGGCGTCGCCTGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           GAGTCTCTGCTGCCGCGGAGGGTAGCCGGAATCTTGGAATTCAGCGAGAGAAAAGTAGCC
JMFS122D03+           GAGTCTCTGCTGCCGCGGAGGGTAGCCGGAATCTTGGAATTCAGCGAGAGAAAAGTAGCC
                      ____________________________________________________________
consensus             GAGTCTCTGCTGCCGCGGAGGGTAGCCGGAATCTTGGAATTCAGCGAGAGAAAAGTAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           ATTAGAATTAGAAGTTGAAGATTTAACAGAGATTACAGAGGTGAGTGAGAGTAAGAGAAG
JMFS122D03+           ATTAGAATTAGAAGTTGAAGATTTAACAGAGATTACAGAGGTGAGTGAGAGTAAGAGAAG
                      ____________________________________________________________
consensus             ATTAGAATTAGAAGTTGAAGATTTAACAGAGATTACAGAGGTGAGTGAGAGTAAGAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS009B05+           TGAAGGGTGGTAGTGAGTATAAAGAAGGGAGGTTCGGA                      
JMFS122D03+           TGAAGGGTGGTAGTGAGTATAAAGAAGGGAGGTTCGGACGGCAAGAGAGAGAGAGAGGAG
                      ____________________________________________________________
consensus             TGAAGGGTGGTAGTGAGTATAAAGAAGGGAGGTTCGGACGGCAAGAGAGAGAGAGAGGAG