Contig 010497:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS067E05Sequence635010497 (3)ref|XP_008351827.1|7e-09PREDICTED: probable boron transporter 2 [Malus domestica]
JMFS120A01Sequence617010497 (3)
JMFS121D03Sequence558010497 (3)

Alignment

This contig is upended


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JMFS067E05+                       CGCTCCAATCTTGCTTGTAACACAGTAGTCTTCCACGAAGGTCATTAC
JMFS120A01+                                                      TCCACGAAGGTCATTAC
                      ____________________________________________________________
consensus                         CGCTCCAATCTTGCTTGTAACACAGTAGTCTTCCACGAAGGTCATTAC
 
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JMFS067E05+           TGATCCCACGAAAAGGTACAAACGTCTCTTCCATGAGACTACAACTGCACTTGCTTGCTA
JMFS121D03+                                        TCCATGAGACTACAACTGCACTTGCTTGCTA
JMFS120A01+           TGATCCCACGAAAAGGTACAAACGTCTCTTCCATGAGACTACAACTGCACTTGCTTGCTA
                      ____________________________________________________________
consensus             TGATCCCACGAAAAGGTACAAACGTCTCTTCCATGAGACTACAACTGCACTTGCTTGCTA
 
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JMFS067E05+           CTCCTACGTATTGTATGCTCGGTCGTCGTCGGATCGAGAGATTTGCTAGGCCGGCCGGCC
JMFS121D03+           CTCCTACGTATTGTATGCTCGGTCGTCGTCGGATCGAGAGATTTGCTAGGCCGGCCGGCC
JMFS120A01+           CTCCTACGTATTGTATGCTCGGTCGTCGTCGGATCGAGAGATTTGCTAGGCCGGCCGGCC
                      ____________________________________________________________
consensus             CTCCTACGTATTGTATGCTCGGTCGTCGTCGGATCGAGAGATTTGCTAGGCCGGCCGGCC
 
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JMFS067E05+           CGCCGGGCTCAAAGTAATTTTCTCCTTTCTTTTTCAATTTCAGAAAAAGAATACTACAGT
JMFS121D03+           CGCCGGGCTCAAAGTAATTTTCTCCTTTCTTTTTCAATTTCAGAAAAAGAATACTACAGT
JMFS120A01+           CGCCGGGCTCAAAGTAATTTTCTCCTTTCTTTTTCAATTTCAGAAAAAGAATACTACAGT
                      ____________________________________________________________
consensus             CGCCGGGCTCAAAGTAATTTTCTCCTTTCTTTTTCAATTTCAGAAAAAGAATACTACAGT
 
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JMFS067E05+           AGTGATTTCACCCAACAACACAGCTCATAGCTGCAGCTAGAGTCGATATGATGAATACAC
JMFS121D03+           AGTGATTTCACCCAACAACACAGCTCATAGCTGCAGCTAGAGTCGATATGATGAATACAC
JMFS120A01+           AGTGATTTCACCCAACAACACAGCTCATAGCTGCAGCTAGAGTCGATATGATGAATACAC
                      ____________________________________________________________
consensus             AGTGATTTCACCCAACAACACAGCTCATAGCTGCAGCTAGAGTCGATATGATGAATACAC
 
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JMFS067E05+           TACTATTAATGAGTATTGACAAAGCAAGCTAGCTAGCTTTATATGATCGATCTGGGAATA
JMFS121D03+           TACTATTAATGAGTATTGACAAAGCAAGCTAGCTAGCTTTATATGATCGATCTGGGAATA
JMFS120A01+           TACTATTAATGAGTATTGACAAAGCAAGCTAGCTAGCTTTATATGATCGATCTGGGAATA
                      ____________________________________________________________
consensus             TACTATTAATGAGTATTGACAAAGCAAGCTAGCTAGCTTTATATGATCGATCTGGGAATA
 
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JMFS067E05+           TAATTGAAAAGCAGTATTTTCGATCACGAAAACTAAAGCCTTGCTTGATCATAATGTGCA
JMFS121D03+           TAATTGAAAAGCAGTATTTTCGATCACGAAAACTAAAGCCTTGCTTGATCATAATGTGCA
JMFS120A01+           TAATTGAAAAGCAGTATTTTCGATCACGAAAACTAAAGCCTTGCTTGATCATAATGTGCA
                      ____________________________________________________________
consensus             TAATTGAAAAGCAGTATTTTCGATCACGAAAACTAAAGCCTTGCTTGATCATAATGTGCA
 
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JMFS067E05+           GAACATGGCCACGTCTACTGCACTTTCACCAAAAGATTTCAACTCTCTCTCTCTCTATCT
JMFS121D03+           GAACATGGCCACGTCTACTGCACTTTCACCAAAAGATTTCAACTCTCTCTCTCTCTATCT
JMFS120A01+           GAACATGGCCACGTCTACTGCACTTTCACCAAAAGATTTCAACTCTCTCTCTCTCTATCT
                      ____________________________________________________________
consensus             GAACATGGCCACGTCTACTGCACTTTCACCAAAAGATTTCAACTCTCTCTCTCTCTATCT
 
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JMFS067E05+           GATCTTTTGTTTATTGGGAAACTAAAAGATATGTCAACTTGATAGATACTGCACGCAAGT
JMFS121D03+           GATCTTTTGTTTATTGGGAAACTAAAAGATATGTCAACTTGATAGATACTGCACGCAAGT
JMFS120A01+           GATCTTTTGTTTATTGGGAAACTAAAAGATATGTCAACTTGATAGATACTGCACGCAAGT
                      ____________________________________________________________
consensus             GATCTTTTGTTTATTGGGAAACTAAAAGATATGTCAACTTGATAGATACTGCACGCAAGT
 
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JMFS067E05+           ATGTGCATCAAAAGAGACGATGGATTAGGCAGTGGGAGATTGAATTGGAGAGTGTTGGAG
JMFS121D03+           ATGTGCATCAAAAGAGACGATGGATTAGGCAGTGGGAGATTGAATTGGAGAGTGTTGGAG
JMFS120A01+           ATGTGCATCAAAAGAGACGATGGATTAGGCAGTGGGAGATTGAATTGGAGAGTGTTGGAG
                      ____________________________________________________________
consensus             ATGTGCATCAAAAGAGACGATGGATTAGGCAGTGGGAGATTGAATTGGAGAGTGTTGGAG
 
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JMFS067E05+           GTTCAACGTACAGGGAGGCAGATTATTAAGAGTGTTCGTTTGTAAGC             
JMFS121D03+           GTTCAACGTACAGGGAGGCAGATTATTAAGAGTGTTCGTTTGTAAGC             
JMFS120A01+           GTTCAACGTACAGGGAGGCAGATTATTAAGAGTGTTCGTTTGTAAGCAAAAAATAGCGAA
                      ____________________________________________________________
consensus             GTTCAACGTACAGGGAGGCAGATTATTAAGAGTGTTCGTTTGTAAGCAAAAAATAGCGAA