Contig 010494:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS020C09+                                       CCATCATTATAAACTCCTTAAGAACATTGGAC
JMFF044N04+                                                        TTAAGAACATTGGAC
                      ____________________________________________________________
consensus                                         CCATCATTATAAACTCCTTAAGAACATTGGAC
 
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JMFS020C09+           CCAACACCAACACCAAAACCAAAATTCTTGAACAGCAAAACCCCATTAGCGGAAACACTG
JMFF044N04+           CCAACACCAACACCAAAACCAAAATTCTTGAACAGCAAAACCCCATTAGCGGAAACACTG
                      ____________________________________________________________
consensus             CCAACACCAACACCAAAACCAAAATTCTTGAACAGCAAAACCCCATTAGCGGAAACACTG
 
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JMFS020C09+           AAATTCGCGTCGTGGAGGTTGAAATTCTGGGAAACGAAAGGGGAGAAATGCAAACGAACC
JMFF044N04+           AAATTCGCGTCGTGGAGGTTGAAATTCTGGGAAACGAAAGGGGAGAAATGCAAACGAACC
                      ____________________________________________________________
consensus             AAATTCGCGTCGTGGAGGTTGAAATTCTGGGAAACGAAAGGGGAGAAATGCAAACGAACC
 
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JMFS020C09+           AAATGGGTCCCTAATTTCTTGATATTCAACGAATATGCCGAGGCAGCAGTGAAAACTCTG
JMFF044N04+           AAATGGGTCCCTAATTTCTTGATATTCAACGAATATGCCGAGGCAGCAGTGAAAACTCTG
                      ____________________________________________________________
consensus             AAATGGGTCCCTAATTTCTTGATATTCAACGAATATGCCGAGGCAGCAGTGAAAACTCTG
 
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JMFS020C09+           GCTGTACTGTACACCAAAGACAAATTGGAACCAGTTCTTTGGGGTTTGAGCGAAATTGCT
JMFF044N04+           GCTGTACTGTACACCAAAGACAAATTGGAACCAGTTCTTTGGGGTTTGAGCGAAATTGCT
                      ____________________________________________________________
consensus             GCTGTACTGTACACCAAAGACAAATTGGAACCAGTTCTTTGGGGTTTGAGCGAAATTGCT
 
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JMFS020C09+           TCGCCTTGGGAGAGATGAACTGAACCAGACTTGATGGAATCGCCAAGAAAGCTTCTGTTA
JMFF044N04+           TCGCCTTGGGAGAGATGAACTGAACCAGACTTGATGGAATCGCCAAGAAAGCTTCTGTTA
JMFS114C02+                   GGAGAGATGAACTGAACCAGACTTGATGGAATCGCCAAGAAAGCTTCTGTTA
                      ____________________________________________________________
consensus             TCGCCTTGGGAGAGATGAACTGAACCAGACTTGATGGAATCGCCAAGAAAGCTTCTGTTA
 
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JMFS020C09+           TCCACGCTGATGCTCCTGTTTGATCCGCAGTTGATGAGGTAATTATCTTGAGGAATGAAA
JMFF044N04+           TCCACGCTGATGCTCCTGTTTGATCCGCAGTTGATGAGGTAATTATCTTGAGGAATGAAA
JMFS114C02+           TCCACGCTGATGCTCCTGTTTGATCCGCAGTTGATGAGGTAATTATCTTGAGGAATGAAA
                      ____________________________________________________________
consensus             TCCACGCTGATGCTCCTGTTTGATCCGCAGTTGATGAGGTAATTATCTTGAGGAATGAAA
 
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JMFS020C09+           GCTGTGGAGAGGTGTATGAGAGAGAAGAACAGTGGCACCAAACTAAGATTTTTGCTTCTC
JMFF044N04+           GCTGTGGAGAGGTGTATGAGAGAGAAGAACAGTGGCACCAAACTAAGATTTTTGCTTCTC
JMFS114C02+           GCTGTGGAGAGGTGTATGAGAGAGAAGAACAGTGGCACCAAACTAAGATTTTTGCTTCTC
                      ____________________________________________________________
consensus             GCTGTGGAGAGGTGTATGAGAGAGAAGAACAGTGGCACCAAACTAAGATTTTTGCTTCTC
 
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JMFS020C09+           ATGGGTACCGGTTTTGTTGGTTCACTGGAAAACGAAATTTTGTCGAGAATTGAAGACACT
JMFF044N04+           ATGGGTACCGGTTTTGTTGGTTCACTGGAAAACGAAATTTTGTCGAGAATTGAAGACACT
JMFS114C02+           ATGGGTACCGGTTTTGTTGGTTCACTGGAAAACGAAATTTTGTCGAGAATTGAAGACACT
                      ____________________________________________________________
consensus             ATGGGTACCGGTTTTGTTGGTTCACTGGAAAACGAAATTTTGTCGAGAATTGAAGACACT
 
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JMFS020C09+           GAGGCTTAGTGGGAGAAAGGGGAGCATATTTAGGAAGGAGGGGAAAGAATTTTTGCAGTT
JMFF044N04+           GAGGCTTAGTGGGAGAAAGGGGAGCATATTTAGGAAGGAGGGGAAAGAATTTTTGCAGTT
JMFS114C02+           GAGGCTTAGTGGGAGAAAGGGGAGCATATTTAGGAAGGAGGGGAAAGAATTTTTGCAGTT
                      ____________________________________________________________
consensus             GAGGCTTAGTGGGAGAAAGGGGAGCATATTTAGGAAGGAGGGGAAAGAATTTTTGCAGTT
 
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JMFS020C09+           CTTGAAAAGTGTAGCTTCACAGAATGGGGAGGAGCCACTGGAGAGTG             
JMFF044N04+           CTTGAAAAGTGTAGCTTCACAGAATGGGGAGGAGCCACTGGAGAGTGGAGATTGTAAAAA
JMFS114C02+           CTTGAAAAGTGTAGCTTCACAGAATGGGGAGGAGCCACTGGAGAGTGGAGATTGTAAAAA
                      ____________________________________________________________
consensus             CTTGAAAAGTGTAGCTTCACAGAATGGGGAGGAGCCACTGGAGAGTGGAGATTGTAAAAA
 
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JMFF044N04+           ACTCTTTCAT                                                  
JMFS114C02+           ACTCTTTCATGGCCGCCTGAAAATGGAATTTTTCAGGTTAAAGAATGATGTTAGGCACCA
                      ____________________________________________________________
consensus             ACTCTTTCATGGCCGCCTGAAAATGGAATTTTTCAGGTTAAAGAATGATGTTAGGCACCA
 
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JMFS114C02+           CCGCACAATGAACTAAGAAATTAGAAGAAATTAGAGATTAGAAGTTAGAACCGCAATGTC
                      ____________________________________________________________
consensus             CCGCACAATGAACTAAGAAATTAGAAGAAATTAGAGATTAGAAGTTAGAACCGCAATGTC
 
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JMFS114C02+           AAGCTTGAGAGCATAATACTGTGGAAATATTGAGATCTAAACTACTCAAACATCATACTC
                      ____________________________________________________________
consensus             AAGCTTGAGAGCATAATACTGTGGAAATATTGAGATCTAAACTACTCAAACATCATACTC