Contig 010491:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS111G07Sequence620010491 (3)ref|XP_006345420.1|153PREDICTED: uncharacterized protein LOC102581052 [Solanum tuberosum]
JMFS163E02Sequence621010491 (3)ref|XP_006345420.1|174PREDICTED: uncharacterized protein LOC102581052 [Solanum tuberosum]
JMSF002I11Sequence367010491 (3)ref|XP_006345420.1|58.5PREDICTED: uncharacterized protein LOC102581052 [Solanum tuberosum]674000729 (4)ref|XP_009758553.1|271PREDICTED: uncharacterized protein LOC104211225 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS163E02+                  GGGATAATCCGATACGGAGACCACAACCCATTGTTCAGAATGGAACGAAGAGT
JMFS111G07+                                                   TTCAGAATGGAACGAAGAGT
                      ____________________________________________________________
consensus                    GGGATAATCCGATACGGAGACCACAACCCATTGTTCAGAATGGAACGAAGAGT
 
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JMFS163E02+           AAGGCGAGGCCTTATCTACAATGGGTTGGACCGAATCAAGATCGAGTTTAGGCAATTCGG
JMFS111G07+           AAGGCGAGGCCTTATCTACAATGGGTTGGACCGAATCAAGATCGAGTTTAGGCAATTCGG
                      ____________________________________________________________
consensus             AAGGCGAGGCCTTATCTACAATGGGTTGGACCGAATCAAGATCGAGTTTAGGCAATTCGG
 
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JMFS163E02+           GCTTTCGAGGTTGACTATGGTGTGATCTCTTGGAGCAAAATAAGGCAGTGGGGGTGGTGA
JMFS111G07+           GCTTTCGAGGTTGACTATGGTGTGATCTCTTGGAGCAAAATAAGGCAGTGGGGGTGGTGA
                      ____________________________________________________________
consensus             GCTTTCGAGGTTGACTATGGTGTGATCTCTTGGAGCAAAATAAGGCAGTGGGGGTGGTGA
 
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JMFS163E02+           AGGAAGTGTGGAAGTAGAAGAGGGCAGCAACAGTGATGGTAAGGAGTGAGATTATGAGGA
JMFS111G07+           AGGAAGTGTGGAAGTAGAAGAGGGCAGCAACAGTGATGGTAAGGAGTGAGATTATGAGGA
                      ____________________________________________________________
consensus             AGGAAGTGTGGAAGTAGAAGAGGGCAGCAACAGTGATGGTAAGGAGTGAGATTATGAGGA
 
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JMSF002I11+             TTGACAGAGTTTTCTGATGCCCATGTTGAGAAATCAAGATTCTTTGTTTCTGAGAATT
JMFS163E02+           TTTTGACAGAGTTTTCTGATGCCCATGTTGAGAAATCAAGATTCTTTGTTTCTGAGAATT
JMFS111G07+           TTTTGACAGAGTTTTCTGATGCCCATGTTGAGAAATCAAGATTCTTTGTTTCTGAGAATT
                      ____________________________________________________________
consensus             TTTTGACAGAGTTTTCTGATGCCCATGTTGAGAAATCAAGATTCTTTGTTTCTGAGAATT
 
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JMSF002I11+           GTTTTTGTTTCAAAATTTGGGGTTTTGAGGGTCTAGTGGATGATTGGTCTTGGACCATCA
JMFS163E02+           GTTTTTGTTTCAAAATTTGGGGTTTTGAGGGTCTAGTGGATGATTGGTCTTGGACCATCA
JMFS111G07+           GTTTTTGTTTCAAAATTTGGGGTTTTGAGGGTCTAGTGGATGATTGGTCTTGGACCATCA
                      ____________________________________________________________
consensus             GTTTTTGTTTCAAAATTTGGGGTTTTGAGGGTCTAGTGGATGATTGGTCTTGGACCATCA
 
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JMSF002I11+           TTGGATCAGTTACTATAAACAGGGATTTTGGTTCAGTTTCTAAATGCAAATCCTTAAACC
JMFS163E02+           TTGGATCAGTTACTATAAACAGGGATTTTGGTTCAGTTTCTAAATGCAAATCCTTAAACC
JMFS111G07+           TTGGATCAGTTACTATAAACAGGGATTTTGGTTCAGTTTCTAAATGCAAATCCTTAAACC
                      ____________________________________________________________
consensus             TTGGATCAGTTACTATAAACAGGGATTTTGGTTCAGTTTCTAAATGCAAATCCTTAAACC
 
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JMSF002I11+           AGTACAACCTTTCCCAAACCAACACAGATTTGCAGGCTATAAGGTTAACTAAAATTAAAG
JMFS163E02+           AGTACAACCTTTCCCAAACCAACACAGATTTGCAGGCTATAAGGTTAACTAAAATTAAAG
JMFS111G07+           AGTACAACCTTTCCCAAACCAACACAGATTTGCAGGCTATAAGGTTAACTAAAATTAAAG
                      ____________________________________________________________
consensus             AGTACAACCTTTCCCAAACCAACACAGATTTGCAGGCTATAAGGTTAACTAAAATTAAAG
 
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JMSF002I11+           AAACAAACAAAAAATGCAAGCTTTACACAGTGTCTATGCCCATATATATAGAAATGTACG
JMFS163E02+           AAACAAACAAAAAATGCAAGCTTTACACAGTGTCTATGCCCATATATATAGAAATGTACG
JMFS111G07+           AAACAAACAAAAAATGCAAGCTTTACACAGTGTCTATGCCCATATATATAGAAATGTACG
                      ____________________________________________________________
consensus             AAACAAACAAAAAATGCAAGCTTTACACAGTGTCTATGCCCATATATATAGAAATGTACG
 
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JMSF002I11+           ATTGTCTCACCTTTCGGCTCCGCAATGTAAAACGAAAATCAGGGCTCCTGGAGATTGACT
JMFS163E02+           ATTGTCTCACCTTTCGGCTCCGCAATGTAAAACGAAAATCAGGGCTCCTGGAGATTGACT
JMFS111G07+           ATTGTCTCACCTTTCGGCTCCGCAATGTAAAACGAAAATCAGGGCTCCTGGAGATTGACT
                      ____________________________________________________________
consensus             ATTGTCTCACCTTTCGGCTCCGCAATGTAAAACGAAAATCAGGGCTCCTGGAGATTGACT
 
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JMSF002I11+           AAACTCAG                                                    
JMFS163E02+           AAACTCAGACCAAACCTCTCTGAATTTG                                
JMFS111G07+           AAACTCAGACCAAACCTCTCTGAATTTGTGTTGCTTCTAAACTTGCAGATCAGTCACCGA
                      ____________________________________________________________
consensus             AAACTCAGACCAAACCTCTCTGAATTTGTGTTGCTTCTAAACTTGCAGATCAGTCACCGA