Contig 010490:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN042O01+                                                                   AGGA
                      ____________________________________________________________
consensus                                                                     AGGA
 
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JMFN042O01+           TAAGGAGCGGGTATCCTTACACGTCCAAAAGGCAGAGCAGGGCGGGGTCGTCCTAGAGAA
                      ____________________________________________________________
consensus             TAAGGAGCGGGTATCCTTACACGTCCAAAAGGCAGAGCAGGGCGGGGTCGTCCTAGAGAA
 
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JMFN042O01+           GCCAAATTACAATTTGCCCGCCTCCCATCAATAATTGGAGTTGGATCAGCACATGCTTTC
                      ____________________________________________________________
consensus             GCCAAATTACAATTTGCCCGCCTCCCATCAATAATTGGAGTTGGATCAGCACATGCTTTC
 
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JMFN042O01+           CTAGCTGACTCGGGGTCCCGGAAGGTCACAAAGCCGTAGCCTTTGGATCGGCCAGTATTC
                      ____________________________________________________________
consensus             CTAGCTGACTCGGGGTCCCGGAAGGTCACAAAGCCGTAGCCTTTGGATCGGCCAGTATTC
 
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JMFN042O01+           TTATCAGTGATGACAACAGCTTCGAGGATATCACCGAACTGCTCAAAGTATCGTTTCATG
                      ____________________________________________________________
consensus             TTATCAGTGATGACAACAGCTTCGAGGATATCACCGAACTGCTCAAAGTATCGTTTCATG
 
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JMFN042O01+           GTTTCGCTCTGAGTTTCCCAGGCCAGTCCTCCAACAAACACCTTAGTGAAAGTGGTGTCC
                      ____________________________________________________________
consensus             GTTTCGCTCTGAGTTTCCCAGGCCAGTCCTCCAACAAACACCTTAGTGAAAGTGGTGTCC
 
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JMFN042O01+           CCAAAGGGGAAATTTAAGTGGTGAAATCCGCCGCCGCCGCCGCCGGCGGAGGTGGAACCC
                      ____________________________________________________________
consensus             CCAAAGGGGAAATTTAAGTGGTGAAATCCGCCGCCGCCGCCGCCGGCGGAGGTGGAACCC
 
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JMFF020C23+                              GCTGCTGATGATGTTGATGCTGGTACGCCATCACCACCGCC
JMFN042O01+           GAACCCGGAACCGGTGGCTGCTGCTGATGATGTTGATGCTGGTACGCCATCACCACCGCC
                      ____________________________________________________________
consensus             GAACCCGGAACCGGTGGCTGCTGCTGATGATGTTGATGCTGGTACGCCATCACCACCGCC
 
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JMFF020C23+           GGGCTTTTAGCTACAGGCACAAGATATATACAGAGAG                       
JMFN042O01+           GGGCTTTTAGCTACAGGCACAAGATATATACAGAGAGAGAGAGAGAGAGAAAGCAAGAGA
                      ____________________________________________________________
consensus             GGGCTTTTAGCTACAGGCACAAGATATATACAGAGAGAGAGAGAGAGAGAAAGCAAGAGA
 
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JMFN042O01+           AGATTCAGAGAAGAAAAGGGTATTAATTTGAAGTGATACTAAAGTTTTTGATCCAATGAA
JMFS110G01+                     AAGAAAAGGGTTTTAATTTGAAGTGATACTAAAGTTTTTGATCCAATGAA
                      ____________________________________________________________
consensus             AGATTCAGAGAAGAAAAGGGTTTTAATTTGAAGTGATACTAAAGTTTTTGATCCAATGAA
 
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JMFN042O01+           AAGTCCAACCCCCCCATATTAACACCAAAC-AAAAAACCCCCCCTAGAAATGATCTGGAA
JMFS110G01+           AAGTCCAACCCCCCCATATTAACCCCAAACAAAAAAACCCCCCCTAAAAATGATTTGGAA
                      ____________________________________________________________
consensus             AAGTCCAACCCCCCCATATTAACCCCAAACAAAAAAACCCCCCCTAGAAATGATTTGGAA
 
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JMFN042O01+           TGGTAAAGCCCA                                                
JMFS110G01+           TGGTAAAGCCCATAAAAATTTTTCAAAAAATAAATCAAGAATTCGACCAGGGAAAGCCAA
                      ____________________________________________________________
consensus             TGGTAAAGCCCATAAAAATTTTTCAAAAAATAAATCAAGAATTCGACCAGGGAAAGCCAA
 
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JMSF051H01+                      TCAAGAAAANTAGAAGGAGAAAAAGGAAAACAGGACAGGAAAACCACAA
JMFS110G01+           AAGCCCGGGGGTCAAGAAAAATAGAAGGGGAAAAAGGAAACCAGGCCAGGAAACCCCCAA
                      ____________________________________________________________
consensus             AAGCCCGGGGGTCAAGAAAAATAGAAGGGGAAAAAGGAAACCAGGCCAGGAAACCCCCAA
 
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JMSF051H01+           GGGAAAAAGGAAACCCTAGAATTGAGGCTGAAAAAGCAAGGAGTAGGTCAAAAGAGGGAG
JMFS110G01+           GGGAAAAAGGAAACCCTAGAATTGGGGCTGAAAAAGCAAGGAGTAGGTCAAAAAAGGGAG
                      ____________________________________________________________
consensus             GGGAAAAAGGAAACCCTAGAATTGGGGCTGAAAAAGCAAGGAGTAGGTCAAAAGAGGGAG
 
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JMSF051H01+           TGGGGTAAGCTCGTGGTGGCAGTGGGGGGGTGGGGGGGTGTAATCAACT           
JMFS110G01+           TGGGGTAAGCTCGTGGTGCCAATGGGGGGGTGGGGGGGTGTAATCAACTTTCCAACCCAG
                      ____________________________________________________________
consensus             TGGGGTAAGCTCGTGGTGGCAGTGGGGGGGTGGGGGGGTGTAATCAACTTTCCAACCCAG
 
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JMFS110G01+           CAGAATAATTTGAAAAGGGTAGGGAAAAGGTAAACAAACAAGCCCATGAACAGGCAAAGC
                      ____________________________________________________________
consensus             CAGAATAATTTGAAAAGGGTAGGGAAAAGGTAAACAAACAAGCCCATGAACAGGCAAAGC