Contig 010487:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS105A04Sequence615010487 (3)ref|XP_011016854.1|3e-63PREDICTED: protein FAM91A1 isoform X1 [Populus euphratica] ref|XP_011016855.1| P
JMFS160A05Sequence541010487 (3)ref|XP_007018698.1|4e-108Uncharacterized protein isoform 1 [Theobroma cacao] gb|EOY15923.1| Uncharacteriz
JMFS167C09Sequence614010487 (3)ref|XP_011016854.1|4e-94PREDICTED: protein FAM91A1 isoform X1 [Populus euphratica] ref|XP_011016855.1| P

Alignment

This contig is upended


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JMFS160A05+                                                       AGCATAGAGCAACTCT
                      ____________________________________________________________
consensus                                                         AGCATAGAGCAACTCT
 
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JMFS160A05+           TCAATAGGATCTTCATAGGATTGCTCCCTATTTGAAACAAATCCTTCGAGCCTGGAAACT
                      ____________________________________________________________
consensus             TCAATAGGATCTTCATAGGATTGCTCCCTATTTGAAACAAATCCTTCGAGCCTGGAAACT
 
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JMFS160A05+           TTAAAACGATCATCGGGATAGACAGAAACATCAAAATAGACCAGTCCCCGTCGATAAAGT
                      ____________________________________________________________
consensus             TTAAAACGATCATCGGGATAGACAGAAACATCAAAATAGACCAGTCCCCGTCGATAAAGT
 
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JMFS160A05+           CCCTTTATCACTTCAGGGTCAAAAAGAATGAAGGAATTCACTTCCTCCTTACATATTTTA
                      ____________________________________________________________
consensus             CCCTTTATCACTTCAGGGTCAAAAAGAATGAAGGAATTCACTTCCTCCTTACATATTTTA
 
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JMFS160A05+           TCAATTGTTGCCATTTCTTCTTCTGTCAGTTTCTTAAATTCTTCCAAAGTAAAGTTGACA
                      ____________________________________________________________
consensus             TCAATTGTTGCCATTTCTTCTTCTGTCAGTTTCTTAAATTCTTCCAAAGTAAAGTTGACA
 
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JMFS160A05+           AGACAAACTCCCCACCATGGCTCAATAACAAAGTCCACTGGTTGAGTAGGCAATAGTTCT
                      ____________________________________________________________
consensus             AGACAAACTCCCCACCATGGCTCAATAACAAAGTCCACTGGTTGAGTAGGCAATAGTTCT
 
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JMFS160A05+           CTTGCAATTGATTTATTCAGCTTCCACATTATTTTCTTAGATTTGCACTTGTTCATAATG
JMFS167C09+                                                        CACTTATTCATAATG
                      ____________________________________________________________
consensus             CTTGCAATTGATTTATTCAGCTTCCACATTATTTTCTTAGATTTGCACTTGTTCATAATG
 
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JMFS160A05+           TCAATAAATTCGTTTCTTCCAATCCCAGTAAGCCGCAAGGCATCTGCAGCGCTAAAATTT
JMFS167C09+           TCAATGAATTCATTTCTTCCAAAACCAGCGAGACGCAGTGCATCTGCAGCACTAAAATTT
                      ____________________________________________________________
consensus             TCAATGAATTCGTTTCTTCCAATCCCAGTGAGCCGCAGTGCATCTGCAGCGCTAAAATTT
 
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JMFS160A05+           GGGATGCTATAATAAGGTTGTTCATTTTTCATGACTTCAAATATCATATCGCAGTAGTAT
JMFS167C09+           GGGATGCTGTCATAAGGTTGCTCATTTTTCATAACTTCAAATAACATATCACAGTAGTAT
JMFS105A04+                                                        ATATCACAGTAGTAT
                      ____________________________________________________________
consensus             GGGATGCTGTCATAAGGTTGTTCATTTTTCATGACTTCAAATATCATATCACAGTAGTAT
 
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JMFS160A05+           CTGAAAGGAGACACCCTCATCACGCGGCAAA                             
JMFS167C09+           CTGAAAGGAGACACCCGCATCACACGGCAAATGTACTCAGCAAGATGATACGGAAACAAC
JMFS105A04+           CTGAAAGGAGACACCCGCATCACACGGCAAATGTACTCAGCAAGATGATACGGAAACAAC
                      ____________________________________________________________
consensus             CTGAAAGGAGACACCCGCATCACACGGCAAATGTACTCAGCAAGATGATACGGAAACAAC
 
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JMFS167C09+           GCTAAATTCCTTCGGAGATACCGCATCATTTCTTCATAGTATTCACCTTCTTTGCATACT
JMFS105A04+           GCTAAATTCCTTCGGAGATACCGCATCATTTCTTCATAGTATTCACCTTCTTTGCATACT
                      ____________________________________________________________
consensus             GCTAAATTCCTTCGGAGATACCGCATCATTTCTTCATAGTATTCACCTTCTTTGCATACT
 
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JMFS167C09+           TTACGAGCAAAACAACTGTTCCATTGGAGTCTCCTCTTTAAGCAATGGTCGATTATCCTT
JMFS105A04+           TTACGAGCAAAACAACTGTTCCATTGGAGTCTCCTCTTTAAGCAATGGTCGATTATCCTT
                      ____________________________________________________________
consensus             TTACGAGCAAAACAACTGTTCCATTGGAGTCTCCTCTTTAAGCAATGGTCGATTATCCTT
 
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JMFS167C09+           CTGTGCCATTCTTCCGTGGAATTCAAAGTAGCTTGAAGCCGCTTTGGAAGGTTTTCCCAA
JMFS105A04+           CTGTGCCATTCTTCCGTGGAATTCAAAGTAGCTTGAAGCCGCTTTGGAAGGTTTTCCCAA
                      ____________________________________________________________
consensus             CTGTGCCATTCTTCCGTGGAATTCAAAGTAGCTTGAAGCCGCTTTGGAAGGTTTTCCCAA
 
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JMFS167C09+           GGGCATTCTTCCTTGAT                                           
JMFS105A04+           GGGCATTCTTCCTTGATCGCTTTTAGTATAAGCTGGTCTTCTAAAGTCGTCGGAGCGTGG
                      ____________________________________________________________
consensus             GGGCATTCTTCCTTGATCGCTTTTAGTATAAGCTGGTCTTCTAAAGTCGTCGGAGCGTGG
 
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JMFS105A04+           TGCATTTTAAAATCCTCAGCAGATCACTCAAATATCTACACTACACAACCGCATAGTCCC
                      ____________________________________________________________
consensus             TGCATTTTAAAATCCTCAGCAGATCACTCAAATATCTACACTACACAACCGCATAGTCCC
 
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JMFS105A04+           TGCAAATGATCTTGAAAAACCGAATAATTCAATACCATCTAGGAATATCTCATATCCAAT
                      ____________________________________________________________
consensus             TGCAAATGATCTTGAAAAACCGAATAATTCAATACCATCTAGGAATATCTCATATCCAAT
 
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JMFS105A04+           CATAGGAAATTGGAACGGAAATGAAATTCCAATCCTGGATCGCACTGCATTTCGATTTTT
                      ____________________________________________________________
consensus             CATAGGAAATTGGAACGGAAATGAAATTCCAATCCTGGATCGCACTGCATTTCGATTTTT
 
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JMFS105A04+           TTTTCTCCGAATTTTCTACGGCTACAGGAATTGACTGAACAGAAAGAACACAGTTAAAAT
                      ____________________________________________________________
consensus             TTTTCTCCGAATTTTCTACGGCTACAGGAATTGACTGAACAGAAAGAACACAGTTAAAAT
 
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JMFS105A04+           AAAAAACTTCACCGGAATTTCGGAATCGAGTAGAGCCGTTCCGGCGATGATTAGAGGTTT
                      ____________________________________________________________
consensus             AAAAAACTTCACCGGAATTTCGGAATCGAGTAGAGCCGTTCCGGCGATGATTAGAGGTTT