Contig 010481:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS032D10Sequence606010481 (5)ref|XP_009606548.1|7e-06PREDICTED: WEB family protein At3g02930, chloroplastic-like [Nicotiana tomentos
JMFS084D12Sequence608010481 (5)emb|CDP13158.1|1e-10unnamed protein product [Coffea canephora]
JMFS099C04Sequence601010481 (5)emb|CDP13158.1|1e-08unnamed protein product [Coffea canephora]
JMFS100A04Sequence124010481 (5)
JMSF004B01Sequence228010481 (5)

Alignment

This contig is upended


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JMFS084D12+                                 CGCTCGCTTCCTCAGCCAATATCTGGGCTTCCTTCAAA
JMFS099C04+                                                         GGGCTTCCTTCAAA
                      ____________________________________________________________
consensus                                   CGCTCGCTTCCTCAGCCAATATCTGGGCTTCCTTCAAA
 
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JMFS084D12+           TCATCCAGAGCCTGTGACTTCTCTTTCTCAACCAAAGCTAACTTCTCCTTCGCCTTCTTA
JMFS099C04+           TCATCCAGAGCCTGTGACTTCTCTTTCTCAACCAAAGCTAACTTCTCCTTCGCCTTCTTA
JMFS032D10+                                       CAACCAAAGCTAACTTCTCCTTCGCCTTCTTA
                      ____________________________________________________________
consensus             TCATCCAGAGCCTGTGACTTCTCTTTCTCAACCAAAGCTAACTTCTCCTTCGCCTTCTTA
 
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JMFS084D12+           AGATCCTCCTGGGCAACATTTAGTTCCCCCTGTAATTCTGATGGTTTCAGGATCCGCGTG
JMFS099C04+           AGATCCTCCTGGGCAACATTTAGTTCCCCCTGTAATTCTGATGGTTTCAGGATCCGCGTG
JMFS032D10+           AGATCCTCCTGGGCAACATTTAGTTCCCCCTGTAATTCTGATGGTTTCAGGATCCGCGTG
                      ____________________________________________________________
consensus             AGATCCTCCTGGGCAACATTTAGTTCCCCCTGTAATTCTGATGGTTTCAGGATCCGCGTG
 
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JMFS084D12+           GGCTTTTTATCAGGCGGGGTACCAATCTTGGAGACACGTCGCTCCACGGATGGCTTAGAA
JMFS099C04+           GGCTTTTTATCAGGCGGGGTACCAATCTTGGAGACACGTCGCTCCACGGATGGCTTAGAA
JMFS032D10+           GGCTTTTTATCAGGCGGGGTACCAATCTTGGAGACACGTCGCTCCACGGATGGCTTAGAA
                      ____________________________________________________________
consensus             GGCTTTTTATCAGGCGGGGTACCAATCTTGGAGACACGTCGCTCCACGGATGGCTTAGAA
 
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JMFS084D12+           ACAACAGATCTCGGAGACTTGTCAACAGAACGCGTGGCTTGCAAAGGCGAGGGCGAACCC
JMFS099C04+           ACAACAGATCTCGGAGACTTGTCAACAGAACGCGTGGCTTGCAAAGGCGAGGGCGAACCC
JMFS032D10+           ACAACAGATCTCGGAGACTTGTCAACAGAACGCGTGGCTTGCAAAGGCGAGGGCGAACCC
                      ____________________________________________________________
consensus             ACAACAGATCTCGGAGACTTGTCAACAGAACGCGTGGCTTGCAAAGGCGAGGGCGAACCC
 
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JMFS084D12+           GTATCAGATTTAGCAGCTGCATCTCTGCTCGTCGCTTTACTGGCCCGAGGAGTTGCATTT
JMFS099C04+           GTATCAGATTTAGCAGCTGCATCTCTGCTCGTCGCTTTACTGGCCCGAGGAGTTGCATTT
JMFS032D10+           GTATCAGATTTAGCAGCTGCATCTCTGCTCGTCGCTTTACTGGCCCGAGGAGTTGCATTT
                      ____________________________________________________________
consensus             GTATCAGATTTAGCAGCTGCATCTCTGCTCGTCGCTTTACTGGCCCGAGGAGTTGCATTT
 
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JMFS084D12+           GCTGGTTTATTATTGTTGGGAGTTTCAGCCAGAGCAGATTTGGATTTGGAGGACATGTTA
JMFS099C04+           GCTGGTTTATTATTGTTGGGAGTTTCAGCCAGAGCAGATTTGGATTTGGAGGACATGTTA
JMSF004B01+                                       CCAGAGCAGATTTGGATTTGGAGGACATGTTA
JMFS032D10+           GCTGGTTTATTATTGTTGGGAGTTTCAGCCAGAGCAGATTTGGATTTGGAGGACATGTTA
                      ____________________________________________________________
consensus             GCTGGTTTATTATTGTTGGGAGTTTCAGCCAGAGCAGATTTGGATTTGGAGGACATGTTA
 
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JMFS084D12+           GAAGCAGATTGGTTTGGTAGCCGCAAAATGAGAGAAGTGCTTCCAGGAAAACAAATTAAA
JMFS099C04+           GAAGCAGATTGGTTTGGTAGCCGCAAAATGAGAGAAGTGCTTCCAGGAAAACAAATTAAA
JMSF004B01+           GAAGCAGATTGGTTTGGTAGCCGCAAAATGAGAGAAGTGCTTCCAGGAAAACAAATTAAA
JMFS032D10+           GAAGCAGATTGGTTTGGTAGCCGCAAAATGAGAGAAGTGCTTCCAGGAAAACAAATTAAA
                      ____________________________________________________________
consensus             GAAGCAGATTGGTTTGGTAGCCGCAAAATGAGAGAAGTGCTTCCAGGAAAACAAATTAAA
 
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JMFS084D12+           GCAAAGGGTTTCTTATTCCACTAGAATCTTGGAAAATGCAGACTGAGAATGTGAGCTGGG
JMFS099C04+           GCAAAGGGTTTCTTATTCCACTAGAATCTTGGAAAATGCAGACTGAGAATGTGAGCTGGG
JMSF004B01+           GCAAAGGGTTTCTTATTCCACTAGAATCTTGGAAAATGCAGACTGAGAATNTGAG     
JMFS032D10+           GCAAAGGGTTTCTTATTCCACTAGAATCTTGGAAAATGCAGACTGAGAATGTGAGCTGGG
                      ____________________________________________________________
consensus             GCAAAGGGTTTCTTATTCCACTAGAATCTTGGAAAATGCAGACTGAGAATGTGAGCTGGG
 
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JMFS084D12+           GAGAGAAAGAAAGAAGACAGTTTTAGCAGATTATATATACACCAGATACGAGTACATCAT
JMFS099C04+           GAGAGAAAGAAAGAAGACAGTTTTAGCAGATTATATATACACCAGATACGAGTACATCAT
JMFS032D10+           GAGAGAAAGAAAGAAGACAGTTTTAGCAGATTATATATACACCAGATACGAGTACATCAT
                      ____________________________________________________________
consensus             GAGAGAAAGAAAGAAGACAGTTTTAGCAGATTATATATACACCAGATACGAGTACATCAT
 
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JMFS084D12+           CTGCAGGATTAACGTAGAGGTACCATAATA                              
JMFS099C04+           CTGCAGGATTAACGTAGAGGTACCATAATATTATAACATTGAATTAA             
JMFS032D10+           CTGCAGGATTAACGTAGAGGTACCATAATATTATAACATTGAATTAAGGTAGTATTTACA
JMFS100A04+                                  CATAATATTATAACATTGAATTAAGGTAGTATTTACA
                      ____________________________________________________________
consensus             CTGCAGGATTAACGTAGAGGTACCATAATATTATAACATTGAATTAAGGTAGTATTTACA
 
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JMFS032D10+           GACAGTAGACTGAGAAAAATGAAGAATTTACAGA                          
JMFS100A04+           GACAGTAGACTGAGAAAAATGAAGAATTTACAGAATATATAATTGGTGTGGGGAGTGTTG
                      ____________________________________________________________
consensus             GACAGTAGACTGAGAAAAATGAAGAATTTACAGAATATATAATTGGTGTGGGGAGTGTTG