Contig 010479:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS096C09Sequence585010479 (2)ref|XP_004233742.1|7e-46PREDICTED: histidine kinase 1 isoform X2 [Solanum lycopersicum]
JMSF050B19Sequence688009571 (2)ref|XP_004233742.1|1e-72PREDICTED: histidine kinase 1 isoform X2 [Solanum lycopersicum]187010479 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS096C09+ TGCTCTCAAATTCTGCAGAAATGGTCCAAATGGATCTTCCCAGGA
                      ____________________________________________________________
consensus TGCTCTCAAATTCTGCAGAAATGGTCCAAATGGATCTTCCCAGGA
 
. : . : . : . : . : . :
JMFS096C09+ AGACGACACCTCACCAACCTCACCAACTGAAGGATTCTGCTCTCCACCTTATGACTTGAT
                      ____________________________________________________________
consensus AGACGACACCTCACCAACCTCACCAACTGAAGGATTCTGCTCTCCACCTTATGACTTGAT
 
. : . : . : . : . : . :
JMFS096C09+ CCTCATGGATTGCCAAATGCCAAAGATGGATGGCTATGAAGCAACAAAAGCCATTAGAAG
                      ____________________________________________________________
consensus CCTCATGGATTGCCAAATGCCAAAGATGGATGGCTATGAAGCAACAAAAGCCATTAGAAG
 
. : . : . : . : . : . :
JMFS096C09+ ATCGGAAATGGAAACTGGTACACACATTCCTATTGTGGCATTGACAGCTCATGCAATGTC
                      ____________________________________________________________
consensus ATCGGAAATGGAAACTGGTACACACATTCCTATTGTGGCATTGACAGCTCATGCAATGTC
 
. : . : . : . : . : . :
JMFS096C09+ GTCGGATGAAGCAAAGTGCCTGGAGGTAGGAATGGATGCTTATTTAACAAAGCCCATTGA
                      ____________________________________________________________
consensus GTCGGATGAAGCAAAGTGCCTGGAGGTAGGAATGGATGCTTATTTAACAAAGCCCATTGA
 
. : . : . : . : . : . :
JMFS096C09+ CAGCAAGCTAATGGTCTCCACTATCCTTTCATTAACAAAGAGAAAAAACTGACTGTTAAA
                      ____________________________________________________________
consensus CAGCAAGCTAATGGTCTCCACTATCCTTTCATTAACAAAGAGAAAAAACTGACTGTTAAA
 
. : . : . : . : . : . :
rJMSF050B19+ AAAAAAAAAAGGAAAGCAAAATAAACAAAACAAC
JMFS096C09+ TGTAAAAAGAAAGAGCTACAGAGGGAAAAAAAAAAAGGAAAGCAAAATAAACAAAACAAC
                      ____________________________________________________________
consensus TGTAAAAAGAAAGAGCTACAGAGGGAAAAAAAAAAAGGAAAGCAAAATAAACAAAACAAC
 
. : . : . : . : . : . :
rJMSF050B19+ AAAATAGTTAGCTAGCTAGCTTTATGCTGTTCTGCAGAACATCATGTAAAACATTTTGTG
JMFS096C09+ AAAATAGTTAGCTAGCTAGCTTTATGCTGTTCTGCAGAACATCATGTAAAACATTTTGTG
                      ____________________________________________________________
consensus AAAATAGTTAGCTAGCTAGCTTTATGCTGTTCTGCAGAACATCATGTAAAACATTTTGTG
 
. : . : . : . : . : . :
rJMSF050B19+ AGCTATAGCAGCCAATGTAACACACCTTTGTATATTTGT
JMFS096C09+ AGCTATAGCAGCCAATGTAACACACCTTTGTATATTTGTGTAAATTTTTCCACAAAAGAT
                      ____________________________________________________________
consensus AGCTATAGCAGCCAATGTAACACACCTTTGTATATTTGTGTAAATTTTTCCACAAAAGAT
 
. : . : . : . : . : . :
JMFS096C09+ GTATCAAAATGACTTCTTGCATACTAAAAAAAAAAAAAAAAAAACGCGAGACTAGTTCTC
                      ____________________________________________________________
consensus GTATCAAAATGACTTCTTGCATACTAAAAAAAAAAAAAAAAAAACGCGAGACTAGTTCTC