Contig 010468:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS067C08Sequence615010468 (3)ref|XP_006348929.1|1e-64PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650
JMSF011P01Sequence297010468 (3)ref|XP_010094304.1|2e-10putative LRR receptor-like serine/threonine-protein kinase [Morus notabilis] gb
JMSF018C20Sequence484010468 (3)ref|XP_004243241.1|1e-42PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650769002825 (2)ref|XP_010094305.1|4e-98putative LRR receptor-like serine/threonine-protein kinase [Morus notabilis] gb

Alignment

This contig is upended


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JMFS067C08+                                                        TATGCTCAGGTTCCT
                      ____________________________________________________________
consensus                                                          TATGCTCAGGTTCCT
 
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JMFS067C08+           GAGAGTAGTGATTCTGGTGAGGACTTTAGGAAATGGTCCCGATAATCGGTTCCCCATAAA
                      ____________________________________________________________
consensus             GAGAGTAGTGATTCTGGTGAGGACTTTAGGAAATGGTCCCGATAATCGGTTCCCCATAAA
 
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JMSF018C20+                                        ACTGTTGTGGTATCGAGCCATTCAGATAATT
JMFS067C08+           GGAGAGTTCAAGCAAGCGCATTGACGCCCACTGTTGTGGTATCGAGCCATTCAGATAATT
                      ____________________________________________________________
consensus             GGAGAGTTCAAGCAAGCGCATTGACGCCCACTGTTGTGGTATCGAGCCATTCAGATAATT
 
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JMSF018C20+           GCGGCTGAGATCCAAGATCTTGAGGTGATGGAACTTTGCAAACTCGGGTGGAAGACCAGC
JMFS067C08+           GCGGCTGAGATCCAAGATCTTGAGGTGATGGAACTTTGAAAACTCGGGTGGAAGACCAGC
                      ____________________________________________________________
consensus             GCGGCTGAGATCCAAGATCTTGAGGTGATGGAACTTTGCAAACTCGGGTGGAAGACCAGC
 
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JMSF018C20+           TGAAAAATTTTGCGACTTCAGAGCTATGGCAGTGATGTGACAGGTGGCGTTGTTATCAAA
JMFS067C08+           TGAAAAATTTTGCGACTTCAGAGCTATGGCAGTGATGTGACAGGTGGCGTTGTTATCAAA
                      ____________________________________________________________
consensus             TGAAAAATTTTGCGACTTCAGAGCTATGGCAGTGATGTGACAGGTGGCGTTGTTATCAAA
 
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JMSF018C20+           AGAGCAATCGCAGGTAACAGTGGTCTCGAAGCTTTTTCTTTGAATTTTGGGGCTCCAGCT
JMSF011P01+                                                    GAATTTNGGGGCTCCAGCT
JMFS067C08+           AGAGCAATCGCAGGTAACAGTGGTCTCGAAGCTTTTTCTTTGAATTTTGGGGCTCCAGCT
                      ____________________________________________________________
consensus             AGAGCAATCGCAGGTAACAGTGGTCTCGAAGCTTTTTCTTTGAATTTTGGGGCTCCAGCT
 
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JMSF018C20+           CTCTCCTCCACTGCAAGGATCCTTCCCGAAATCCCAGTCCGTTTTCCCAAGCTTTTTAGC
JMSF011P01+           CTCTCCTCCACTGCAAGGATCCTTCCCGAAATCCCAGTCCGTTTTCCCAANCTTTTTAGC
JMFS067C08+           CTCTCCTCCACTGCAAGGATCCTTCCCGAAATCCCAGTCCGTTTTCCCAAGCTTTTTAGC
                      ____________________________________________________________
consensus             CTCTCCTCCACTGCAAGGATCCTTCCCGAAATCCCAGTCCGTTTTCCCAAGCTTTTTAGC
 
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JMSF018C20+           GATCTGTTTAAGTGCTATCACTTCTTCTTGATGGAGCTTGGGGGTGGCAGCTAAAAGAGA
JMSF011P01+           GATCTGTTTAAGTGCTATCACTTCTTCTTGATGGAGCTTGGGGGTGGCAGCTAAAAGAGA
JMFS067C08+           GATCTGTTTAAGTGCTATCACTTCTTCTTGATGGAGCTTGGGGGTGGCAGCTAAAAGAGA
                      ____________________________________________________________
consensus             GATCTGTTTAAGTGCTATCACTTCTTCTTGATGGAGCTTGGGGGTGGCAGCTAAAAGAGA
 
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JMSF018C20+           GGGTGAGAGAAGAAGAAGAAGAAGCTCAAGAGAACAGAGGATGCAGAGAAATGGAAGGTT
JMSF011P01+           GGGTGAGAGAAGAAGAAGAAGAAGCTCAAGAGAACAGAGGATGCAGAGAAATGGAAGGNT
JMFS067C08+           GGGTGAGAGAAGAAGAAGAAGAAGCTCAAGAGAACAGAGGATGCAGAGAAATGGAAGGTT
                      ____________________________________________________________
consensus             GGGTGAGAGAAGAAGAAGAAGAAGCTCAAGAGAACAGAGGATGCAGAGAAATGGAAGGTT
 
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JMSF018C20+           TCTGGGGAGAAAAGGTGGGTTGAGTTGGGTTTCCATTACTGCAATTCGGGAAGGGAGGTG
JMSF011P01+           TCTGGGGAGAAAAGGTGGGTTGAGTTGGGTTTCCATTACTGCAATTCGGGAAGGGAGGTG
JMFS067C08+           TCTGGGGAGAAAAGGTGGGTTGAGTTGGGTTTCCATTACTGCAATTCGGGAAGGGAGGTG
                      ____________________________________________________________
consensus             TCTGGGGAGAAAAGGTGGGTTGAGTTGGGTTTCCATTACTGCAATTCGGGAAGGGAGGTG
 
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JMSF018C20+           AGTGAGCTCAGTCGTTGCCCACTTTGTCT                               
JMSF011P01+           AGTGAGCTCAGTCGTNGCCCACTTTGTCT                               
JMFS067C08+           AGTGAGCTCAGTCGTTGCCCACTTTGTCTTTGCCTTTGCCTTTGCCTTTGCCTCAGCTTT
                      ____________________________________________________________
consensus             AGTGAGCTCAGTCGTTGCCCACTTTGTCTTTGCCTTTGCCTTTGCCTTTGCCTCAGCTTT