Contig 010465:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010J09Sequence549010337 (8)ref|XP_009619069.1|6e-93PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]722010465 (3)ref|XP_004243182.1|4e-80PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]
JMFS064C09Sequence482010465 (3)ref|XP_004243182.1|1e-42PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]
JMSF023C06Sequence664010337 (8)ref|XP_009619069.1|4e-118PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]711010465 (3)ref|XP_004243182.1|4e-79PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF023C06+                                            AAACCGCTTTAAGAAAATTGCAGAAA
rJMFF010J09+                                   ACTCAGGGGAAACCGCTTTAAGAAAATTGCAGAAA
                      ____________________________________________________________
consensus                                      ACTCAGGGGAAACCGCTTTAAGAAAATTGCAGAAA
 
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rJMSF023C06+          TTGAAGGTGCTGAGGACACTCGAATCAGTCCAAGTGGCACAGATAGTAATAAGAGTGACG
rJMFF010J09+          TTGAAGGTGCTGAGGACACTCGAATCAGTCCAAGTGGCACAGATAGTAATAAGAGTGACG
                      ____________________________________________________________
consensus             TTGAAGGTGCTGAGGACACTCGAATCAGTCCAAGTGGCACAGATAGTAATAAGAGTGACG
 
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rJMSF023C06+          GTGATGTAGACGATATTGGTGAGGAAGGAGTTTCTACTATTATGCTTGATCAGGTCCTTG
rJMFF010J09+          GTGATGTAGACGATATTGGTGAGGAAGGAGTTTCTACTATTATGCTTGATCAGGTCCTTG
                      ____________________________________________________________
consensus             GTGATGTAGACGATATTGGTGAGGAAGGAGTTTCTACTATTATGCTTGATCAGGTCCTTG
 
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rJMSF023C06+          ATCTGTTGGGACGAAGGTGGGACCGAATCAATGGAGCTCAGGCCTTGAAAATCTTACCAC
rJMFF010J09+          ATCTGTTGGGACGAAGGTGGGACCGAATCAATGGAGCTCAGGCCTTGAAAATCTTACCAC
                      ____________________________________________________________
consensus             ATCTGTTGGGACGAAGGTGGGACCGAATCAATGGAGCTCAGGCCTTGAAAATCTTACCAC
 
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rJMSF023C06+          GGGAGACCAAATTGGAGAACTTGCTTCCGTTTCTTGGACCTCTTCTGAGAAAATCAAGTG
rJMFF010J09+          GGGAGACCAAATTGGAGAACTTGCTTCCGTTTCTTGGACCTCTTCTGAGAAAATCAAGTG
JMFS064C09-                                                                     TG
                      ____________________________________________________________
consensus             GGGAGACCAAATTGGAGAACTTGCTTCCGTTTCTTGGACCTCTTCTGAGAAAATCAAGTG
 
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rJMSF023C06+          AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
rJMFF010J09+          AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
JMFS064C09-           AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
                      ____________________________________________________________
consensus             AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
 
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rJMSF023C06+          AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
rJMFF010J09+          AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
JMFS064C09-           AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
                      ____________________________________________________________
consensus             AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
 
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rJMSF023C06+          CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
rJMFF010J09+          CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
JMFS064C09-           CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
                      ____________________________________________________________
consensus             CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
 
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rJMSF023C06+          TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
rJMFF010J09+          TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
JMFS064C09-           TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
                      ____________________________________________________________
consensus             TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
 
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rJMSF023C06+          AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
rJMFF010J09+          AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
JMFS064C09-           AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
                      ____________________________________________________________
consensus             AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
 
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rJMSF023C06+          TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
rJMFF010J09+          TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
JMFS064C09-           TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
                      ____________________________________________________________
consensus             TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
 
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rJMSF023C06+          AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
rJMFF010J09+          AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
JMFS064C09-           AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
                      ____________________________________________________________
consensus             AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
 
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rJMSF023C06+          TGGTGTCAGGTGTGTTGTAAGAT                                     
rJMFF010J09+          TGGTGTCAGGTGTGTTGTAAGAT                                     
JMFS064C09-           TGGTGTCAGGTGTGTTGTAAGATTATCTGAAAATGCGATTTTAAATTATTTGCGGTTTTG
                      ____________________________________________________________
consensus             TGGTGTCAGGTGTGTTGTAAGATTATCTGAAAATGCGATTTTAAATTATTTGCGGTTTTG