Contig 010459:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007F02Sequence524010459 (2)ref|NP_001275299.1|4e-39BTB/POZ domain-containing protein At1g04390-like [Solanum tuberosum] gb|AGT37251704021227ref|NP_001275299.1|4e-40BTB/POZ domain-containing protein At1g04390-like [Solanum tuberosum] gb|AGT37251
JMFS057F05Sequence618010459 (2)ref|NP_001275299.1|4e-30BTB/POZ domain-containing protein At1g04390-like [Solanum tuberosum] gb|AGT37251

Alignment

This contig is upended


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JMFS057F05+                                                CAAGGATGATAAAGGAAAAACAA
                      ____________________________________________________________
consensus                                                  CAAGGATGATAAAGGAAAAACAA
 
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JMFF007F02+              CAGGAAAATGAGATTCCAGCATTGAACTTGGCAAAACACTGACGATCTTTACAGCAA
JMFS057F05+           GAACAGGAAAATGAGATTCCAGCATTGAACTTGGCAAAACACTGACGATCTTTACAGCAA
                      ____________________________________________________________
consensus             GAACAGGAAAATGAGATTCCAGCATTGAACTTGGCAAAACACTGACGATCTTTACAGCAA
 
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JMFF007F02+           GTTCAGAGGCCAAAATCAAAGTATCTTGACTTTTTGATCCAAGAATACTTCCCAATGCTC
JMFS057F05+           GTTCAGAGGCCAAAATCAAAGTATCTTGACTTTTTGATCCAAGAATACTTCCCAATGCTC
                      ____________________________________________________________
consensus             GTTCAGAGGCCAAAATCAAAGTATCTTGACTTTTTGATCCAAGAATACTTCCCAATGCTC
 
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JMFF007F02+           CAATCATACCAGGGATTGAATCCTTTACAAGGGGGTGTCTTAATGTCTCAAGAGATAAAC
JMFS057F05+           CAATCATACCAGGGATTGAATCCTTTACAAGGGGGTGTCTTAATGTCTCAAGAGATAAAC
                      ____________________________________________________________
consensus             CAATCATACCAGGGATTGAATCCTTTACAAGGGGGTGTCTTAATGTCTCAAGAGATAAAC
 
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JMFF007F02+           AATCAAGAAAGGCATCAATGGAACGGATTACAAGCTTTTGTCTGTCAAAGTCAGTAAAAT
JMFS057F05+           AATCAAGAAAGGCATCAATGGAACGGATTACAAGCTTTTGTCTGTCAAAGTCAGTAAAAT
                      ____________________________________________________________
consensus             AATCAAGAAAGGCATCAATGGAACGGATTACAAGCTTTTGTCTGTCAAAGTCAGTAAAAT
 
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JMFF007F02+           TCCAGTTTGGTCCTTTGTCATCATAATATCCAACTCCGAGACCAAGAGCATGGTGAAGGC
JMFS057F05+           TCCAGTTTGGTCCTTTGTCATCATAATAT-----TCCGAGACCAAGAGCATGGTGAAGGC
                      ____________________________________________________________
consensus             TCCAGTTTGGTCCTTTGTCATCATAATATCCAACTCCGAGACCAAGAGCATGGTGAAGGC
 
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JMFF007F02+           GCTGATGAAGAGTGACCATGTGGCCATTAACACCACGGTTGCTCTCAGCACCATGTTTTG
JMFS057F05+           GCTGATGAAGAGTGACCATGTGGCCATTAACACCACGGTTGCTCTCAGCACCATGTTTTG
                      ____________________________________________________________
consensus             GCTGATGAAGAGTGACCATGTGGCCATTAACACCACGGTTGCTCTCAGCACCATGTTTTG
 
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JMFF007F02+           AGGATGATGGCCTCATCGGTGCTTGAATTTAAAGAAAATTTCCCCAAATGCTACCACAAA
JMFS057F05+           AGGATGATGGCCTCATCGGTGCTTGAATTTAAAGAAAATTTCCCCAAATGCTACCACAAA
                      ____________________________________________________________
consensus             AGGATGATGGCCTCATCGGTGCTTGAATTTAAAGAAAATTTCCCCAAATGCTACCACAAA
 
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JMFF007F02+           TGGTAAGAAAAAATTGACAGCAAAGTTTGCTCCTTCTGCAGAAAATCTATGTGCTGAAGC
JMFS057F05+           TGGTAAGAAAAAATTGACAGCAAAGTTTGCTCCTTCTGCAGAAAATCTATGTGCTGAAGC
                      ____________________________________________________________
consensus             TGGTAAGAAAAAATTGACAGCAAAGTTTGCTCCTTCTGCAGAAAATCTATGTGCTGAAGC
 
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JMFF007F02+           AGTTCTTCTCTCTCTATCATATGCTATATCGCATTGCAGCATCGAAC             
JMFS057F05+           AGTTCTTCTCTCTCTATCATATGCTATATCGCATTGCAGCATCGAACGCCGTCTTCTCCT
                      ____________________________________________________________
consensus             AGTTCTTCTCTCTCTATCATATGCTATATCGCATTGCAGCATCGAACGCCGTCTTCTCCT
 
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JMFS057F05+           TGCACAAAATTACATATCCGAACCGGATTGGAAACTGGAAACTGGAAACTGTAATTCTTA
                      ____________________________________________________________
consensus             TGCACAAAATTACATATCCGAACCGGATTGGAAACTGGAAACTGGAAACTGTAATTCTTA