| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS008E05 | Sequence | 643 | 010457 (9) | dbj|BAB40335.1| | 5e-106 | starch branching enzyme [Ipomoea batatas] | |||||
| JMFS015G03 | Sequence | 536 | 010457 (9) | dbj|BAB40335.1| | 4e-90 | starch branching enzyme [Ipomoea batatas] | |||||
| JMFS049B02 | Sequence | 626 | 010457 (9) | dbj|BAB40335.1| | 8e-108 | starch branching enzyme [Ipomoea batatas] | |||||
| JMFS050E11 | Sequence | 598 | 010457 (9) | dbj|BAB40335.1| | 2e-100 | starch branching enzyme [Ipomoea batatas] | |||||
| JMFS050F03 | Sequence | 598 | 010457 (9) | dbj|BAB40335.1| | 2e-100 | starch branching enzyme [Ipomoea batatas] | |||||
| JMFS056F09 | Sequence | 619 | 010457 (9) | dbj|BAB40335.1| | 2e-96 | starch branching enzyme [Ipomoea batatas] | |||||
| JMFS154D06 | Sequence | 613 | 010457 (9) | dbj|BAB40335.1| | 2e-100 | starch branching enzyme [Ipomoea batatas] | |||||
| JMFS169E12 | Sequence | 628 | 010457 (9) | dbj|BAB40335.1| | 2e-104 | starch branching enzyme [Ipomoea batatas] | |||||
| JMSF004H07 | Sequence | 389 | 010457 (9) | dbj|BAB40335.1| | 3e-49 | starch branching enzyme [Ipomoea batatas] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS049B02+ T
____________________________________________________________
consensus T
. : . : . : . : . : . :
JMFS049B02+ GACCAAGTCCAGGAGNAGGAATGGCCCTCTTTTTCACCATTTCAGATTCAGCACTGATGT
JMFS169E12+ AGGAATGGCCCTCTTTTTCACCATTTCAGATTCAGCACTGATGT
JMFS154D06+ TTTTCACCATTTCAGATTCAGCACTGATGT
JMFS050E11+ TTTTCACCATTTCAGATTCAGCACTGATGT
JMFS050F03+ TTTTCACCATTTCAGATTCAGCACTGATGT
JMFS008E05+ GAGGAATGGCCCTCTTTTTCACCATTTCAGATTCAGCACTGATGT
JMFS056F09+ TCAGATTCAGCACTGATGT
____________________________________________________________
consensus GACCAAGTCCAGGAGGAGGAATGGCCCTCTTTTTCACCATTTCAGATTCAGCACTGATGT
. : . : . : . : . : . :
JMFS049B02+ CATCCAAAGTATCTGGTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
JMFS169E12+ CATCCAAAGTATCTGGTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
JMFS154D06+ CATCCAAAGTATCTGGTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
JMFS050E11+ CATCCAAAGTATCTGGTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
JMFS015G03+ GTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
JMFS050F03+ CATCCAAAGTATCTGGTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
JMFS008E05+ CATCCAAAGTATCTGGTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
JMFS056F09+ CATCCAAAGTATCTGGTTTNTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
____________________________________________________________
consensus CATCCAAAGTATCTGGTTTTTGTGAAACTTCCACATTACCATCTTCTTCAAATTGTAGTG
. : . : . : . : . : . :
JMFS049B02+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
JMFS169E12+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
JMFS154D06+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
JMFS050E11+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
JMFS015G03+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
JMFS050F03+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
JMFS008E05+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
JMFS056F09+ AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
____________________________________________________________
consensus AAGACGTGAGATCCTGCTCTTGAACGCTTTCTTTAGAATCACTTGCTGCTTTGACGAAAT
. : . : . : . : . : . :
JMFS049B02+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
JMFS169E12+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
JMFS154D06+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
JMFS050E11+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
JMFS015G03+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
JMFS050F03+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
JMFS008E05+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
JMFS056F09+ CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
____________________________________________________________
consensus CCACATTGCTTTCACTGTTGCTGTTCTCTTCCATTTTCACATTATCCACGTCAGCCGATA
. : . : . : . : . : . :
JMFS049B02+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMFS169E12+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMSF004H07+ TCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMFS154D06+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMFS050E11+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMFS015G03+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMFS050F03+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMFS008E05+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
JMFS056F09+ CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
____________________________________________________________
consensus CTTGGGTATCTTCTGATAATGCCTCAGCAACCTGTAACTGATCAGTTGAAAACGATGATC
. : . : . : . : . : . :
JMFS049B02+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMFS169E12+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMSF004H07+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMFS154D06+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMFS050E11+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMFS015G03+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMFS050F03+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMFS008E05+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
JMFS056F09+ CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
____________________________________________________________
consensus CCTCGCCCTCGCCACCAGGAACAAGGACCTTCTCTGATGCTGCAACTCTAAAAGAAGAGG
. : . : . : . : . : . :
JMFS049B02+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMFS169E12+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMSF004H07+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMFS154D06+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMFS050E11+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMFS015G03+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMFS050F03+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMFS008E05+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
JMFS056F09+ GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
____________________________________________________________
consensus GTTCGGATTCATGTGAAGTATTTCCGGCAAAGATCTTCCATGAAGAAAACGAATTCCTTT
. : . : . : . : . : . :
JMFS049B02+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMFS169E12+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMSF004H07+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMFS154D06+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMFS050E11+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMFS015G03+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMFS050F03+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMFS008E05+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
JMFS056F09+ TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
____________________________________________________________
consensus TCAGAGCGAGAGTGGGGTTGGCATTCCGCCGATCAGCGTTCGAGGTCGATCCGAGATGCT
. : . : . : . : . : . :
JMFS049B02+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMFS169E12+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMSF004H07+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMFS154D06+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMFS050E11+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMFS015G03+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMFS050F03+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMFS008E05+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
JMFS056F09+ TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
____________________________________________________________
consensus TGTAAACCGGCGCAACAGCAGGCAAACGGAGGCCGGAGAGGGTGTAAACCATATCTCTCT
. : . : . : . : . : . :
JMFS049B02+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMFS169E12+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMSF004H07+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMFS154D06+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMFS050E11+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMFS015G03+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMFS050F03+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMFS008E05+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
JMFS056F09+ GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
____________________________________________________________
consensus GCCTTCAATTTCCGAATCTGGAAAGAATTGAATCGAGAAAGAGAAGAATGCGGGCGGAAT
. : . : . : . : . : . :
JMFS049B02+ CGTTTGCTCCTTTCACAAAATCTGC
JMFS169E12+ CGTTTGCTCCTTTCACAAAATCTGCTGACTTACACTCTCAAAG
JMSF004H07+ CGTTTGCTCCTTTCACAAAATCTGCTGACTTACACTCTC
JMFS154D06+ CGTTTGCTCCTTTCACAAAATCTGCTGACTTACACTCTCAAAG
JMFS050E11+ CGTTTGCTCCTTTCACAAAATCTGCTGA
JMFS015G03+ CGTTTGCTCCT
JMFS050F03+ CGTTTGCTCCTTTCACAAAATCTGCTGA
JMFS008E05+ CGTTTGCTCCTTTCACAAAATCTGCTGACTTACACTCTCAAAGTGGTGATTAG
JMFS056F09+ CGTTTGCTCCTTTCACAAAATCTGCTGACTTACACTCTCAAAGTGGTGATTAGCAATTGC
____________________________________________________________
consensus CGTTTGCTCCTTTCACAAAATCTGCTGACTTACACTCTCAAAGTGGTGATTAGCAATTGC