| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS055F06 | Sequence | 575 | 010455 (3) | gb|AFK47094.1| | 2e-51 | unknown [Lotus japonicus] | |||||
| JMSF023B10 | Sequence | 634 | 002078 (6) | ref|XP_009615653.1| | 9e-92 | PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061} | 747 | 010455 (3) | ref|XP_010092922.1| | 2e-81 | GTP-binding protein TypA/BipA-like protein [Morus notabilis] gb|EXB52899.1| GTP- |
| JMSF046C10 | Sequence | 650 | 002078 (6) | ref|XP_009615653.1| | 7e-97 | PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061} | 701 | 010455 (3) | gb|AFK47094.1| | 2e-97 | unknown [Lotus japonicus] |
This contig is upended
. : . : . : . : . : . :
rJMSF023B10+ TGATATG
____________________________________________________________
consensus TGATATG
. : . : . : . : . : . :
rJMSF046C10+ CTCAAATACAAAATCCCGACCCGTGGTCTT
rJMSF023B10+ CAGGGGGTTGGGTCGGAAGGAACGACTCTTCTCAAATACAAAATCCCGACCCGTGGTCTT
____________________________________________________________
consensus CAGGGGGTTGGGTCGGAAGGAACGACTCTTCTCAAATACAAAATCCCGACCCGTGGTCTT
. : . : . : . : . : . :
rJMSF046C10+ CTTGGACTGCGTAATGCAATCTTGACCGCCACTAGAGGAACAGCGATTCTCAACACTA-T
rJMSF023B10+ CTTGGACTGCGTAATGCAATCTTGACCGCCACTAGAGGAACAGCGATTCTCAACACTATT
____________________________________________________________
consensus CTTGGACTGCGTAATGCAATCTTGACCGCCACTAGAGGAACAGCGATTCTCAACACTATT
. : . : . : . : . : . :
rJMSF046C10+ TTTCGATAGCTATGGACCTTGGGCTGGCGATATTTCCACACGGGATCAGGGTTCACTGGT
rJMSF023B10+ TTTCGATAGCTATGGACCTTGGGCTGGCGATATTTCCACACGGGATCAGGGTTCACTGGT
____________________________________________________________
consensus TTTCGATAGCTATGGACCTTGGGCTGGCGATATTTCCACACGGGATCAGGGTTCACTGGT
. : . : . : . : . : . :
rJMSF046C10+ TGCATTCGAGGATGGAACAAGTACATCCTATGCTCTTTCGAGTTCACAAGAAAGAGGGCA
rJMSF023B10+ TGCATTCGAGGATGGAACAAGTACATCCTATGCTCTTTCGAGTTCACAAGAAAGAGGGCA
JMFS055F06- CTTTCGAGTTCACAAGAAAGAGGGCA
____________________________________________________________
consensus TGCATTCGAGGATGGAACAAGTACATCCTATGCTCTTTCGAGTTCACAAGAAAGAGGGCA
. : . : . : . : . : . :
rJMSF046C10+ AATGTTTATCGCTCCCGGAGTTGATGTTTACAAAGGTCAAATAGTTGGCATTCATCAGCG
rJMSF023B10+ AATGTTTATCGCTCCCGGAGTTGATGTTTACAAAGGTCAAATAGTTGGCATTCATCAGCG
JMFS055F06- AATGTTTATCGCTCCCGGAGTTGATGTTTACAAAGGTCAAATAGTTGGCATTCATCAGCG
____________________________________________________________
consensus AATGTTTATCGCTCCCGGAGTTGATGTTTACAAAGGTCAAATAGTTGGCATTCATCAGCG
. : . : . : . : . : . :
rJMSF046C10+ CCCGGGCGACTTGTCTCTCAACGTCTGCAAGAAAAAAGCTGCAACAAACGTTCGTTCTAA
rJMSF023B10+ CCCGGGCGACTTGTCTCTCAACGTCTGCAAGAAAAAAGCTGCAACAAACGTTCGTTCTAA
JMFS055F06- CCCGGGCGACTTGTCTCTCAACGTCTGCAAGAAAAAAGCTGCAACAAACGTTCGTTCTAA
____________________________________________________________
consensus CCCGGGCGACTTGTCTCTCAACGTCTGCAAGAAAAAAGCTGCAACAAACGTTCGTTCTAA
. : . : . : . : . : . :
rJMSF046C10+ CAAAGAACAAACAGTGGTTCTCGATACGCCACTGGATTATAGTCTGGACGATTGCATAGA
rJMSF023B10+ CAAAGAACAAACAGTGGTTCTCGATACGCCACTGGATTATAGTCTGGACGATTGCATAGA
JMFS055F06- CAAAGAACAAACAGTGGTTCTCGATACGCCACTGGATTATAGTCTGGACGATTGCATAGA
____________________________________________________________
consensus CAAAGAACAAACAGTGGTTCTCGATACGCCACTGGATTATAGTCTGGACGATTGCATAGA
. : . : . : . : . : . :
rJMSF046C10+ GTACATACAAGAAGACGAGCTGGTTGAAGTTACTCCCCAGAGTATCCGGATGTGCAAGAA
rJMSF023B10+ GTACATACAAGAAGACGAGCTGGTTGAAGTTACTCCCCAGAGTATCCGGATGTGCAAGAA
JMFS055F06- GTACATACAAGAAGACGAGCTGGTTGAAGTTACTCCCCAGAGTATCCGGATGTGCAAGAA
____________________________________________________________
consensus GTACATACAAGAAGACGAGCTGGTTGAAGTTACTCCCCAGAGTATCCGGATGTGCAAGAA
. : . : . : . : . : . :
rJMSF046C10+ CCCGAAGATCACGACCCCGAAGAAGACAAAGTAAAGATTTACGCAGCACGATAAACGAGG
rJMSF023B10+ CCCGAAGATCACGACCCCGAAGAAGACAAAGTAAAGATTTACGCAGCACGATAAACGAGG
JMFS055F06- CCCGAAGATCACGACCCCGAAGAAGACAAAGTAAAGATTTACGCAGCACGATAAACGAGG
____________________________________________________________
consensus CCCGAAGATCACGACCCCGAAGAAGACAAAGTAAAGATTTACGCAGCACGATAAACGAGG
. : . : . : . : . : . :
rJMSF046C10+ ACTTCCCGGCTTGTCATTCCCGCCATATATGCCACTCAAATGGCACCATAGCAGATTGAT
rJMSF023B10+ ACTTCCCGGCTTGTCATTCCCGCCATATATGCCACTCAAATGGCACCATAGCAGATTGAT
JMFS055F06- ACTTCCCGGCTTGTCATTCCCGCCATATATGCCACTCAAATGGCACCATAGCAGATTGAT
____________________________________________________________
consensus ACTTCCCGGCTTGTCATTCCCGCCATATATGCCACTCAAATGGCACCATAGCAGATTGAT
. : . : . : . : . : . :
rJMSF046C10+ CACACATGTTGCATTCTTCACCAATATAGAAATTATGTGAAGAGGTATGCAGCATTGAAT
rJMSF023B10+ CACACATGTTGCATTCTTCACCAATATAGAAATTATGTGAAGAGGTATGCAGCATTGAAT
JMFS055F06- CACACATGTTGCATTCTTCACCAATATAGAAATTATGTGAAGAGGTATGCAGCATTGAAT
____________________________________________________________
consensus CACACATGTTGCATTCTTCACCAATATAGAAATTATGTGAAGAGGTATGCAGCATTGAAT
. : . : . : . : . : . :
rJMSF046C10+ TGAAATTCATAGATTTATTACCATACAATACAAAGGTGTAGTGAATTTTGGTCAGATATA
rJMSF023B10+ TGAAATTCATAGATTTATTACCATACAATACAAAGGTGTAGTGAATTTTGGTCAGATATA
JMFS055F06- TGAAATTCATAGATTTATTACCATACAATACAAAGGTGTAGTGAATTTTGGTCAGATATA
____________________________________________________________
consensus TGAAATTCATAGATTTATTACCATACAATACAAAGGTGTAGTGAATTTTGGTCAGATATA
. : . : . : . : . : . :
rJMSF046C10+ TATGATTGATGT
rJMSF023B10+ TATGATTGATGTATATAACT
JMFS055F06- TATGATTGATGTATATAACTGTGACAGGAACAATTGCATCAATTGTTAATTATATTCTAT
____________________________________________________________
consensus TATGATTGATGTATATAACTGTGACAGGAACAATTGCATCAATTGTTAATTATATTCTAT