Contig 010450:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS050D06Sequence605010450 (2)ref|XP_006353838.1|1e-98PREDICTED: protein CTC-INTERACTING DOMAIN 7-like isoform X1 [Solanum tuberosum]
JMSF002B18Sequence235014562783010450 (2)ref|XP_006353838.1|1e-61PREDICTED: protein CTC-INTERACTING DOMAIN 7-like isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF002B18-                                                          ATTCTATCAAAA
                      ____________________________________________________________
consensus                                                             ATTCTATCAAAA
 
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rJMSF002B18-          TACATCAGCAAATATAGACAAAAAGGTAAAGGTACAAAAATACTTGGGGCTGGCTCATGC
                      ____________________________________________________________
consensus             TACATCAGCAAATATAGACAAAAAGGTAAAGGTACAAAAATACTTGGGGCTGGCTCATGC
 
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rJMSF002B18-          AAGTCCCAAACTGCTACAAAAAGGTATCCACCTAAAGGACCAAGTATACCTTACCGGTAC
                      ____________________________________________________________
consensus             AAGTCCCAAACTGCTACAAAAAGGTATCCACCTAAAGGACCAAGTATACCTTACCGGTAC
 
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rJMSF002B18-          AAATTTCAGAACAGTCTCCATTTCCATTTTTTTTCCTTGTTCCCTACTGTGCTTTCTGAG
                      ____________________________________________________________
consensus             AAATTTCAGAACAGTCTCCATTTCCATTTTTTTTCCTTGTTCCCTACTGTGCTTTCTGAG
 
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rJMSF002B18-          TTGCCCTAATCTCTGATCCCTCCAATTTACAGGTACAACAATATTCTTCTTTTTCTTTTT
                      ____________________________________________________________
consensus             TTGCCCTAATCTCTGATCCCTCCAATTTACAGGTACAACAATATTCTTCTTTTTCTTTTT
 
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rJMSF002B18-          CTTTTTCTTTTTTTCTACTTTTTTCTTTTTTCTTGATGATTCCATGGGTTATGCTGTGTG
                      ____________________________________________________________
consensus             CTTTTTCTTTTTTTCTACTTTTTTCTTTTTTCTTGATGATTCCATGGGTTATGCTGTGTG
 
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rJMSF002B18-          TCATCAAAAAACTCCTATACCTTGACTCAGTACATCACAACTCGGAGCAGCCCTGGTTGG
                      ____________________________________________________________
consensus             TCATCAAAAAACTCCTATACCTTGACTCAGTACATCACAACTCGGAGCAGCCCTGGTTGG
 
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rJMSF002B18-          GGTTCAGAGTAGTCAAGGCCCTCCTCTAGCAGGTAGCATTGTACGGCAATTGGAAGTCTA
JMFS050D06+                                                                  GTCTA
                      ____________________________________________________________
consensus             GGTTCAGAGTAGTCAAGGCCCTCCTCTAGCAGGTAGCATTGTACGGCAATTGGAAGTCTA
 
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rJMSF002B18-          CCGGGAGTCCTTGAACCCTTCGTAGGCTGCCCTATTCCTACAGAAATGAAGACTTGCAAT
JMFS050D06+           CCGGGAGTCCTTGAACCCTTCGTAGGCTGCCCTATTCCTACAGAAATGAAGACTTGCAAT
                      ____________________________________________________________
consensus             CCGGGAGTCCTTGAACCCTTCGTAGGCTGCCCTATTCCTACAGAAATGAAGACTTGCAAT
 
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rJMSF002B18-          TGCTGATCTGTTGATCTCGCTGCATTTATCAATCCAGCCAGCTCACGCTTCAGGACAAGA
JMFS050D06+           TGCTGATCTGTTGATCTCGCTGCATTTCTCAATCCAGCCAGCTCACGCTTCAGGACAAGA
                      ____________________________________________________________
consensus             TGCTGATCTGTTGATCTCGCTGCATTTCTCAATCCAGCCAGCTCACGCTTCAGGACAAGA
 
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rJMSF002B18-          AGAGCATCGTTAACATTATATCCATGCAGATCTATGAGTCTATCTTGTCCTCTGCCATTG
JMFS050D06+           AGAGCATCGTTAACATTATATCCATGCAGATCTATGAGTCTATCTTGTCCTCTGCCATTG
                      ____________________________________________________________
consensus             AGAGCATCGTTAACATTATATCCATGCAGATCTATGAGTCTATCTTGTCCTCTGCCATTG
 
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rJMSF002B18-          CCTTGAATCTCTTGATTCCTTAGGCGAAATAGAGATTCTTGTGACTTCCCATGAGCAGTA
JMFS050D06+           CCTTGAATCTCTTGATTCCTTAGGCGAAATAGAGATTCTTGTGACTTCCCATGAGCAGTA
                      ____________________________________________________________
consensus             CCTTGAATCTCTTGATTCCTTAGGCGAAATAGAGATTCTTGTGACTTCCCATGAGCAGTA
 
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rJMSF002B18-          TTTATCTGCATATTATGTAGCTGCCCATTAGTGTTCCATTCCTTAGCTAAAGCCTTGTTG
JMFS050D06+           TTTATCTGCATATTATGTAGCTGCCCATTAGTGTTCCATTCCTTAGCTAAAGCCTTGTTG
                      ____________________________________________________________
consensus             TTTATCTGCATATTATGTAGCTGCCCATTAGTGTTCCATTCCTTAGCTAAAGCCTTGTTG
 
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rJMSF002B18-          CCAATAAAANTTGCCTGCCGAGCCTGCTGTTCGAANTATGGATNGCGTAAA         
JMFS050D06+           CCAATAAGATTTGCCTGCCGAGCCTGCTGTTCGAAGTATGGATTGCGTAAATGTGCGTGG
                      ____________________________________________________________
consensus             CCAATAAGATTTGCCTGCCGAGCCTGCTGTTCGAAGTATGGATTGCGTAAATGTGCGTGG
 
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JMFS050D06+           TCACGAGCTTCTTCCCGAATTTCAGAATACATGTTTGCAACTGCATCTCCAGTTTCAAGC
                      ____________________________________________________________
consensus             TCACGAGCTTCTTCCCGAATTTCAGAATACATGTTTGCAACTGCATCTCCAGTTTCAAGC
 
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JMFS050D06+           CAAACAGGACCTGCATGAGTTGACCCTCGACTTTGCAACCTGTCACCATAGAACCCTCTA
                      ____________________________________________________________
consensus             CAAACAGGACCTGCATGAGTTGACCCTCGACTTTGCAACCTGTCACCATAGAACCCTCTA
 
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JMFS050D06+           CTTTGGCTACCATTGAAAGAACTAAACATGGCATTAGAATTTCTACTTGATCCAACACTT
                      ____________________________________________________________
consensus             CTTTGGCTACCATTGAAAGAACTAAACATGGCATTAGAATTTCTACTTGATCCAACACTT
 
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JMFS050D06+           GCATCAGCTAATCCATTTCTGTCATACTTCCAGATGCTAGAATCTTGATGTGCCATCTTC
                      ____________________________________________________________
consensus             GCATCAGCTAATCCATTTCTGTCATACTTCCAGATGCTAGAATCTTGATGTGCCATCTTC