Contig 010446:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS045G02Sequence542010446 (2)ref|XP_009781014.1|209PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]
JMFS063C08Sequence620010446 (2)ref|XP_009781014.1|301PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS063C08+                                                    CGAATCGAAACCATCATTC
                      ____________________________________________________________
consensus                                                      CGAATCGAAACCATCATTC
 
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JMFS063C08+           TCCCAATCACTTCATCCTTACCAGGCCCGACTCTATCAACAACATCTATAATCAAATAAT
                      ____________________________________________________________
consensus             TCCCAATCACTTCATCCTTACCAGGCCCGACTCTATCAACAACATCTATAATCAAATAAT
 
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JMFS063C08+           CCTCGAAAGGCTCAGAGGCGACGAGTATAATCTCCTCGTTCCACATCGGATTAATGTGCC
                      ____________________________________________________________
consensus             CCTCGAAAGGCTCAGAGGCGACGAGTATAATCTCCTCGTTCCACATCGGATTAATGTGCC
 
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JMFS063C08+           TCTGAGCCGGCCTAGTAGTCCTGGCCTGATGGCCAAGCTGCAATCTCACATAAGCCTCGG
                      ____________________________________________________________
consensus             TCTGAGCCGGCCTAGTAGTCCTGGCCTGATGGCCAAGCTGCAATCTCACATAAGCCTCGG
 
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JMFS063C08+           GCATTCGCCCTTTATCCGCGGGGACAAGATCTTGAGCCTCGATAACATGAACTCTTAGAT
                      ____________________________________________________________
consensus             GCATTCGCCCTTTATCCGCGGGGACAAGATCTTGAGCCTCGATAACATGAACTCTTAGAT
 
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JMFS063C08+           AAAACAATCTGGGAGAGAAATAGACCTTGGATCGAGTATGAGCCATGCTGTGAGGGCTAA
                      ____________________________________________________________
consensus             AAAACAATCTGGGAGAGAAATAGACCTTGGATCGAGTATGAGCCATGCTGTGAGGGCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS063C08+           CACCATAAGCATCTGAATGCAAAGCATCCGGGAAGGCTTCATCGGCTTGGGTTCCCATCC
                      ____________________________________________________________
consensus             CACCATAAGCATCTGAATGCAAAGCATCCGGGAAGGCTTCATCGGCTTGGGTTCCCATCC
 
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JMFS063C08+           AAACGGCGAGCATAATTTCTCCTTGGTGGATTCTTTCCCCTTTCTTCCCCACCAATCTGT
                      ____________________________________________________________
consensus             AAACGGCGAGCATAATTTCTCCTTGGTGGATTCTTTCCCCTTTCTTCCCCACCAATCTGT
 
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JMFS063C08+           ACCATTGAGGAGCCAAGGGGCTATCTGGGGGGACTCTGAGAGGAACTTCAAGGATATCAA
                      ____________________________________________________________
consensus             ACCATTGAGGAGCCAAGGGGCTATCTGGGGGGACTCTGAGAGGAACTTCAAGGATATCAA
 
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JMFS063C08+           ATCCAACTCTCCCCACGAAATCATCCTTCACGAAATCCTTATCCTTCACGACTACCTCGA
JMFS045G02+                                                                     GA
                      ____________________________________________________________
consensus             ATCCAACTCTCCCCACGAAATCATCCTTCACGAAATCCTTATCCTTCACGACTACCTCGA
 
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JMFS063C08+           TCATATGGGACTGCATATTCTCCTTTGCGAAGGCGAAAACCTCGTTCCAAACTGGGTTCT
JMFS045G02+           TCATATGGGACTGCATATTCTCCTTTGCGAAGGCGAAAACCTCGTTCCAAACTGGGTTCT
                      ____________________________________________________________
consensus             TCATATGGGACTGCATATTCTCCTTTGCGAAGGCGAAAACCTCGTTCCAAACTGGGTTCT
 
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JMFS045G02+           GGTTCTTCTCAAAGTGCCTGGTGGTGGCTTTGTAGTTTCCAATTTTGACTTCCACATAGG
                      ____________________________________________________________
consensus             GGTTCTTCTCAAAGTGCCTGGTGGTGGCTTTGTAGTTTCCAATTTTGACTTCCACATAGG
 
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JMFS045G02+           GATCAAGACTCCCGGTGAGATCCATGACGGGGAGATCTCTGGCCTTCACGACGTGAACAT
                      ____________________________________________________________
consensus             GATCAAGACTCCCGGTGAGATCCATGACGGGGAGATCTCTGGCCTTCACGACGTGAACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS045G02+           AGAGGAAATACATCTGCTCTACCAAATCATATGTGCTTGCGGTTTTGTCTCTCCCCCAAT
                      ____________________________________________________________
consensus             AGAGGAAATACATCTGCTCTACCAAATCATATGTGCTTGCGGTTTTGTCTCTCCCCCAAT
 
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JMFS045G02+           ACCCAGTTCTTGCAGCTAGAGGAGGCCTGGTTTCAACTAAGCCAAACTCCGGCCTTTGCC
                      ____________________________________________________________
consensus             ACCCAGTTCTTGCAGCTAGAGGAGGCCTGGTTTCAACTAAGCCAAACTCCGGCCTTTGCC
 
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JMFS045G02+           CGCCCGGCATTTGCATACGCATTAGCCCAGGAGGCATCGGTCCGGCCTTCATGAAATCGC
                      ____________________________________________________________
consensus             CGCCCGGCATTTGCATACGCATTAGCCCAGGAGGCATCGGTCCGGCCTTCATGAAATCGC
 
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JMFS045G02+           TCCGGGGTTCGACGGCAACCGGAGGAGGCGGAGGACCGGCTCCGCCAGCTCCGGCGGCGG
                      ____________________________________________________________
consensus             TCCGGGGTTCGACGGCAACCGGAGGAGGCGGAGGACCGGCTCCGCCAGCTCCGGCGGCGG
 
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JMFS045G02+           CGGCGGCGCCGACAGAGAAAAAAGTCCGAACTTCCGGCTCCTTTTTCTTCTTCTTCTTGG
                      ____________________________________________________________
consensus             CGGCGGCGCCGACAGAGAAAAAAGTCCGAACTTCCGGCTCCTTTTTCTTCTTCTTCTTGG
 
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JMFS045G02+           TTTCGCTCTCTATCTTCGGCTCCTCCTCGAACAAATTGGGGTTGATTTCTTGGAGTGGGG
                      ____________________________________________________________
consensus             TTTCGCTCTCTATCTTCGGCTCCTCCTCGAACAAATTGGGGTTGATTTCTTGGAGTGGGG